RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 NECTIN2Q92692 538 aa9.33□□□□□ -0.92
BRCA1-221ENST00000493795 FSD1Q9BTV5 496 aa9.32□□□□□ -0.92
BRCA1-221ENST00000493795 CCDC192P0DO97 292 aa9.32□□□□□ -0.92
BRCA1-221ENST00000493795 MCM2P49736 904 aa9.32□□□□□ -0.92
BRCA1-221ENST00000493795 NUTM2FA1L443 756 aa9.32□□□□□ -0.92
BRCA1-221ENST00000493795 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-221ENST00000493795 LRRFIP2Q9Y608 721 aaKnown RBP9.32□□□□□ -0.92
BRCA1-221ENST00000493795 HIP1O00291 1037 aa9.32□□□□□ -0.92
BRCA1-221ENST00000493795 CFAP45Q9UL16 551 aa9.32□□□□□ -0.92
BRCA1-221ENST00000493795 AAMPQ13685 434 aa9.31□□□□□ -0.92
BRCA1-221ENST00000493795 TRIM21P19474 475 aaKnown RBP9.31□□□□□ -0.92
BRCA1-221ENST00000493795 TICAM2Q86XR7 235 aa9.31□□□□□ -0.92
BRCA1-221ENST00000493795 KLHL34Q8N239 644 aa9.31□□□□□ -0.92
BRCA1-221ENST00000493795 FEZ1Q99689 392 aa9.31□□□□□ -0.92
BRCA1-221ENST00000493795 GBP3Q9H0R5 595 aa9.31□□□□□ -0.92
BRCA1-221ENST00000493795 NUTM2DQ5VT03 806 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-221ENST00000493795 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
BRCA1-221ENST00000493795 ERICH4A6NGS2 130 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 PRPF40AO75400 957 aaKnown RBP9.3□□□□□ -0.92
BRCA1-221ENST00000493795 CCDC148Q8NFR7 591 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 ZHX3Q9H4I2 956 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 CETN2P41208 172 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 PANK3Q9H999 370 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 UQCRHLA0A096LP55 91 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 UQCRHP07919 91 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 ERCC6Q03468 1493 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 ANKRD18BA2A2Z9 1011 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 DIAPH1O60610 1272 aaKnown RBP9.3□□□□□ -0.92
BRCA1-221ENST00000493795 CFAP57Q96MR6 1250 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 LNPKQ9C0E8 428 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 DNAI2Q9GZS0 605 aa9.3□□□□□ -0.92
BRCA1-221ENST00000493795 BCCIPQ9P287 314 aaKnown RBP eCLIP9.3□□□□□ -0.92
BRCA1-221ENST00000493795 ZBED9Q6R2W3 1325 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 EFCAB2Q5VUJ9 269 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 TNMDQ9H2S6 317 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 TRAK1Q9UPV9 953 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 DCAF8L1A6NGE4 600 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 ANAPC15P60006 121 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 AEBP1Q8IUX7 1158 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 FAM177A1Q8N128 213 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-221ENST00000493795 DDX11Q96FC9 970 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 DDX23Q9BUQ8 820 aaKnown RBP9.29□□□□□ -0.92
BRCA1-221ENST00000493795 UBTFL1P0CB47 393 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-221ENST00000493795 RIPK4P57078 832 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 PDCL2Q8N4E4 241 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 CRACR2AQ9BSW2 395 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 SMC1AQ14683 1233 aaKnown RBP9.29□□□□□ -0.92
BRCA1-221ENST00000493795 MICALCLQ6ZW33 695 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 UACAQ9BZF9 1416 aa9.29□□□□□ -0.92
BRCA1-221ENST00000493795 FIBPO43427 364 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 CCDC57Q2TAC2 916 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 KIAA1328Q86T90 577 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 SSR1P43307 286 aaKnown RBP9.28□□□□□ -0.92
BRCA1-221ENST00000493795 GNAI1P63096 354 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 TSPYL4Q9UJ04 414 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 NOL7Q9UMY1 257 aaKnown RBP9.28□□□□□ -0.92
BRCA1-221ENST00000493795 FMN1Q68DA7 1419 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 CEBPZQ03701 1054 aaKnown RBP9.28□□□□□ -0.92
BRCA1-221ENST00000493795 ERC1Q8IUD2 1116 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 BMP2KQ9NSY1 1161 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-221ENST00000493795 EPB41L2O43491 1005 aaKnown RBP9.28□□□□□ -0.92
BRCA1-221ENST00000493795 SOGA3Q5TF21 947 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 WASHC2CQ9Y4E1 1318 aa9.28□□□□□ -0.92
BRCA1-221ENST00000493795 GCOM1H8Y6P7 765 aaPredicted RBP9.27□□□□□ -0.92
BRCA1-221ENST00000493795 MYZAPP0CAP1 466 aa9.27□□□□□ -0.92
BRCA1-221ENST00000493795 MATR3P43243 847 aaKnown RBP eCLIP9.27□□□□□ -0.92
BRCA1-221ENST00000493795 DNAJC2Q99543 621 aaKnown RBP9.27□□□□□ -0.92
BRCA1-221ENST00000493795 MCM3P25205 808 aa9.27□□□□□ -0.93
BRCA1-221ENST00000493795 FAM107BQ9H098 131 aa9.27□□□□□ -0.93
BRCA1-221ENST00000493795 CCDC113Q9H0I3 377 aa9.27□□□□□ -0.93
BRCA1-221ENST00000493795 MAP9Q49MG5 647 aa9.27□□□□□ -0.93
BRCA1-221ENST00000493795 PPM1FP49593 454 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-221ENST00000493795 ANKRD1Q15327 319 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 RSPH4AQ5TD94 716 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 ZNF397Q8NF99 534 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-221ENST00000493795 RAB3GAP2Q9H2M9 1393 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 APAF1O14727 1248 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 ME1P48163 572 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 SMTNL1A8MU46 457 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 MPHOSPH10O00566 681 aaKnown RBP9.26□□□□□ -0.93
BRCA1-221ENST00000493795 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 UBXN4Q92575 508 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 L3MBTL2Q969R5 705 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 CCDC69A6NI79 296 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 RRP9O43818 475 aaKnown RBP9.26□□□□□ -0.93
BRCA1-221ENST00000493795 NEK4P51957 841 aa9.26□□□□□ -0.93
BRCA1-221ENST00000493795 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.26□□□□□ -0.93
BRCA1-221ENST00000493795 GNL3LQ9NVN8 582 aaKnown RBP9.26□□□□□ -0.93
BRCA1-221ENST00000493795 CARMIL2Q6F5E8 1435 aa9.25□□□□□ -0.93
BRCA1-221ENST00000493795 EIF5P55010 431 aaKnown RBP9.25□□□□□ -0.93
BRCA1-221ENST00000493795 AIMP1Q12904 312 aaKnown RBP9.25□□□□□ -0.93
BRCA1-221ENST00000493795 TTC39AQ5SRH9 613 aa9.25□□□□□ -0.93
BRCA1-221ENST00000493795 CEP57L1Q8IYX8 460 aa9.25□□□□□ -0.93
BRCA1-221ENST00000493795 IBSPP21815 317 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-221ENST00000493795 MAPK8IP2Q13387 824 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms