RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SBNO1A3KN83 1393 aa14.8□□□□□ -0.04
TRAPPC12-222ENST00000493792 WASLO00401 505 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC12-222ENST00000493792 ADGRB2O60241 1585 aa14.79□□□□□ -0.04
TRAPPC12-222ENST00000493792 KIF1AQ12756 1690 aa14.79□□□□□ -0.04
TRAPPC12-222ENST00000493792 TNS3Q68CZ2 1445 aa14.79□□□□□ -0.04
TRAPPC12-222ENST00000493792 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
TRAPPC12-222ENST00000493792 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC12-222ENST00000493792 USP32Q8NFA0 1604 aa14.78□□□□□ -0.04
TRAPPC12-222ENST00000493792 ANKARQ7Z5J8 1434 aa14.78□□□□□ -0.04
TRAPPC12-222ENST00000493792 EIF3AQ14152 1382 aaKnown RBP14.78□□□□□ -0.04
TRAPPC12-222ENST00000493792 EZH2Q15910 746 aaKnown RBP14.77□□□□□ -0.05
TRAPPC12-222ENST00000493792 CAMKK2Q96RR4 588 aa14.77□□□□□ -0.05
TRAPPC12-222ENST00000493792 BTG4Q9NY30 223 aa14.77□□□□□ -0.05
TRAPPC12-222ENST00000493792 LMOD2Q6P5Q4 547 aa14.76□□□□□ -0.05
TRAPPC12-222ENST00000493792 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
TRAPPC12-222ENST00000493792 QRICH2Q9H0J4 1663 aa14.76□□□□□ -0.05
TRAPPC12-222ENST00000493792 A0A0G2JS52 829 aa14.75□□□□□ -0.05
TRAPPC12-222ENST00000493792 SRPK2P78362 688 aaKnown RBP14.75□□□□□ -0.05
TRAPPC12-222ENST00000493792 MYT1Q01538 1121 aa14.75□□□□□ -0.05
TRAPPC12-222ENST00000493792 CDK19Q9BWU1 502 aa14.75□□□□□ -0.05
TRAPPC12-222ENST00000493792 TULP4Q9NRJ4 1543 aa14.75□□□□□ -0.05
TRAPPC12-222ENST00000493792 DISP2A7MBM2 1401 aa14.75□□□□□ -0.05
TRAPPC12-222ENST00000493792 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
TRAPPC12-222ENST00000493792 SPATA31A5Q5VU36 1347 aa14.74□□□□□ -0.05
TRAPPC12-222ENST00000493792 SPATA31A7Q8IWB4 1347 aa14.74□□□□□ -0.05
TRAPPC12-222ENST00000493792 PRR36Q9H6K5 1346 aa14.73□□□□□ -0.05
TRAPPC12-222ENST00000493792 NUDT16Q96DE0 195 aaKnown RBP14.73□□□□□ -0.05
TRAPPC12-222ENST00000493792 GPRASP1Q5JY77 1395 aa14.73□□□□□ -0.05
TRAPPC12-222ENST00000493792 NGDNQ8NEJ9 315 aaKnown RBP14.72□□□□□ -0.05
TRAPPC12-222ENST00000493792 CABP2Q9NPB3 220 aa14.71□□□□□ -0.05
TRAPPC12-222ENST00000493792 TIMELESSQ9UNS1 1208 aa14.71□□□□□ -0.05
TRAPPC12-222ENST00000493792 NWD2Q9ULI1 1742 aa14.71□□□□□ -0.05
TRAPPC12-222ENST00000493792 EVC2Q86UK5 1308 aa14.7□□□□□ -0.06
TRAPPC12-222ENST00000493792 TRIM37O94972 964 aa14.7□□□□□ -0.06
TRAPPC12-222ENST00000493792 YY1P25490 414 aa14.7□□□□□ -0.06
TRAPPC12-222ENST00000493792 ITSN1Q15811 1721 aa14.69□□□□□ -0.06
TRAPPC12-222ENST00000493792 FAM196AQ6ZSG2 479 aa14.69□□□□□ -0.06
TRAPPC12-222ENST00000493792 ATP7BP35670 1465 aa14.69□□□□□ -0.06
TRAPPC12-222ENST00000493792 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC12-222ENST00000493792 PLCH1Q4KWH8 1693 aa14.68□□□□□ -0.06
TRAPPC12-222ENST00000493792 APBA3O96018 575 aa14.67□□□□□ -0.06
TRAPPC12-222ENST00000493792 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
TRAPPC12-222ENST00000493792 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
TRAPPC12-222ENST00000493792 PPIP5K1Q6PFW1 1433 aa14.65□□□□□ -0.06
TRAPPC12-222ENST00000493792 ACEP12821 1306 aa14.65□□□□□ -0.06
TRAPPC12-222ENST00000493792 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
TRAPPC12-222ENST00000493792 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
TRAPPC12-222ENST00000493792 PRDM11Q9NQV5 511 aa14.64□□□□□ -0.07
TRAPPC12-222ENST00000493792 NRAPQ86VF7 1730 aa14.63□□□□□ -0.07
TRAPPC12-222ENST00000493792 TRPM3Q9HCF6 1732 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC12-222ENST00000493792 PARD3Q8TEW0 1356 aa14.63□□□□□ -0.07
TRAPPC12-222ENST00000493792 USP47Q96K76 1375 aa14.63□□□□□ -0.07
TRAPPC12-222ENST00000493792 CABP1Q9NZU7 370 aa14.63□□□□□ -0.07
TRAPPC12-222ENST00000493792 CHRNA2Q15822 529 aa14.62□□□□□ -0.07
TRAPPC12-222ENST00000493792 THSD7AQ9UPZ6 1657 aa14.61□□□□□ -0.07
TRAPPC12-222ENST00000493792 ABCA3Q99758 1704 aa14.61□□□□□ -0.07
TRAPPC12-222ENST00000493792 PLEKHG3A1L390 1219 aa14.61□□□□□ -0.07
TRAPPC12-222ENST00000493792 BARGINQ6ZT62 677 aa14.61□□□□□ -0.07
TRAPPC12-222ENST00000493792 ALS2Q96Q42 1657 aa14.61□□□□□ -0.07
TRAPPC12-222ENST00000493792 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC12-222ENST00000493792 KIAA0232Q92628 1395 aa14.6□□□□□ -0.07
TRAPPC12-222ENST00000493792 SBNO2Q9Y2G9 1366 aa14.6□□□□□ -0.07
TRAPPC12-222ENST00000493792 NBPF14Q5TI25 921 aa14.6□□□□□ -0.07
TRAPPC12-222ENST00000493792 TMC1Q8TDI8 760 aa14.6□□□□□ -0.07
TRAPPC12-222ENST00000493792 STRN4Q9NRL3 753 aa14.6□□□□□ -0.07
TRAPPC12-222ENST00000493792 RGPD1P0DJD0 1748 aa14.6□□□□□ -0.07
TRAPPC12-222ENST00000493792 KCNQ2O43526 872 aa14.59□□□□□ -0.07
TRAPPC12-222ENST00000493792 NUTM2GQ5VZR2 741 aa14.59□□□□□ -0.07
TRAPPC12-222ENST00000493792 SPON1Q9HCB6 807 aa14.59□□□□□ -0.07
TRAPPC12-222ENST00000493792 COL14A1Q05707 1796 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-222ENST00000493792 TNS1Q9HBL0 1735 aaKnown RBP14.58□□□□□ -0.07
TRAPPC12-222ENST00000493792 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.08
TRAPPC12-222ENST00000493792 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
TRAPPC12-222ENST00000493792 SLC24A1O60721 1099 aa14.57□□□□□ -0.08
TRAPPC12-222ENST00000493792 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
TRAPPC12-222ENST00000493792 TMF1P82094 1093 aa14.56□□□□□ -0.08
TRAPPC12-222ENST00000493792 LARP1Q6PKG0 1096 aaKnown RBP14.56□□□□□ -0.08
TRAPPC12-222ENST00000493792 ABTB2Q8N961 1025 aa14.56□□□□□ -0.08
TRAPPC12-222ENST00000493792 TESK2Q96S53 571 aa14.56□□□□□ -0.08
TRAPPC12-222ENST00000493792 EVA1CP58658 441 aa14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 TCP11L2Q8N4U5 519 aa14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 PPP1R1BQ9UD71 204 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 NINLQ9Y2I6 1382 aa14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 USP6P35125 1406 aa14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 CRYBG1Q9Y4K1 1723 aa14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 UTRNP46939 3433 aa14.54□□□□□ -0.08
TRAPPC12-222ENST00000493792 KTN1Q86UP2 1357 aaKnown RBP14.53□□□□□ -0.08
TRAPPC12-222ENST00000493792 EIF4G2P78344 907 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAPPC12-222ENST00000493792 HDGFL2Q7Z4V5 671 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC12-222ENST00000493792 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
TRAPPC12-222ENST00000493792 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
TRAPPC12-222ENST00000493792 SSH2Q76I76 1423 aa14.52□□□□□ -0.08
TRAPPC12-222ENST00000493792 PLSCR1O15162 318 aa14.52□□□□□ -0.09
TRAPPC12-222ENST00000493792 PROM2Q8N271 834 aa14.52□□□□□ -0.09
TRAPPC12-222ENST00000493792 PDGFDQ9GZP0 370 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC12-222ENST00000493792 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC12-222ENST00000493792 USP19O94966 1318 aa14.51□□□□□ -0.09
TRAPPC12-222ENST00000493792 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
TRAPPC12-222ENST00000493792 HSPA5P11021 654 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms