RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 TOPAZ1Q8N9V7 1692 aa17.16■□□□□ 0.34
PDS5B-208ENST00000493653 GPRASP1Q5JY77 1395 aa17.16■□□□□ 0.34
PDS5B-208ENST00000493653 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
PDS5B-208ENST00000493653 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
PDS5B-208ENST00000493653 GJD4Q96KN9 370 aaPredicted RBP17.16■□□□□ 0.34
PDS5B-208ENST00000493653 NRAPQ86VF7 1730 aa17.16■□□□□ 0.34
PDS5B-208ENST00000493653 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
PDS5B-208ENST00000493653 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
PDS5B-208ENST00000493653 NGDNQ8NEJ9 315 aaKnown RBP17.11■□□□□ 0.33
PDS5B-208ENST00000493653 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
PDS5B-208ENST00000493653 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
PDS5B-208ENST00000493653 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
PDS5B-208ENST00000493653 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
PDS5B-208ENST00000493653 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
PDS5B-208ENST00000493653 VPS72Q15906 364 aa17.08■□□□□ 0.32
PDS5B-208ENST00000493653 NUDT16Q96DE0 195 aaKnown RBP17.07■□□□□ 0.32
PDS5B-208ENST00000493653 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
PDS5B-208ENST00000493653 SRCAPQ6ZRS2 3230 aa17.06■□□□□ 0.32
PDS5B-208ENST00000493653 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
PDS5B-208ENST00000493653 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
PDS5B-208ENST00000493653 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
PDS5B-208ENST00000493653 TRPM1Q7Z4N2 1603 aa17.05■□□□□ 0.32
PDS5B-208ENST00000493653 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
PDS5B-208ENST00000493653 POLR3AO14802 1390 aaPredicted RBP17.04■□□□□ 0.32
PDS5B-208ENST00000493653 A0A0G2JS52 829 aa17.04■□□□□ 0.32
PDS5B-208ENST00000493653 MYT1Q01538 1121 aa17.04■□□□□ 0.32
PDS5B-208ENST00000493653 SEPT12Q8IYM1 358 aa17.04■□□□□ 0.32
PDS5B-208ENST00000493653 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
PDS5B-208ENST00000493653 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
PDS5B-208ENST00000493653 CENPJQ9HC77 1338 aaPredicted RBP17.03■□□□□ 0.32
PDS5B-208ENST00000493653 FKBP8Q14318 412 aa17.03■□□□□ 0.32
PDS5B-208ENST00000493653 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
PDS5B-208ENST00000493653 PRDM11Q9NQV5 511 aa17.02■□□□□ 0.32
PDS5B-208ENST00000493653 PPIP5K1Q6PFW1 1433 aa17.02■□□□□ 0.31
PDS5B-208ENST00000493653 ACEP12821 1306 aa17.01■□□□□ 0.31
PDS5B-208ENST00000493653 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
PDS5B-208ENST00000493653 THSD7AQ9UPZ6 1657 aa17.01■□□□□ 0.31
PDS5B-208ENST00000493653 SRPK2P78362 688 aaKnown RBP17■□□□□ 0.31
PDS5B-208ENST00000493653 NUTM2GQ5VZR2 741 aa17■□□□□ 0.31
PDS5B-208ENST00000493653 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
PDS5B-208ENST00000493653 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
PDS5B-208ENST00000493653 L3MBTL2Q969R5 705 aa16.99■□□□□ 0.31
PDS5B-208ENST00000493653 CCDC61Q9Y6R9 512 aa16.99■□□□□ 0.31
PDS5B-208ENST00000493653 KRT27Q7Z3Y8 459 aa16.98■□□□□ 0.31
PDS5B-208ENST00000493653 SIN3AQ96ST3 1273 aa16.97■□□□□ 0.31
PDS5B-208ENST00000493653 CABP2Q9NPB3 220 aa16.97■□□□□ 0.31
PDS5B-208ENST00000493653 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
PDS5B-208ENST00000493653 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
PDS5B-208ENST00000493653 ONECUT3O60422 494 aaPredicted RBP16.96■□□□□ 0.31
PDS5B-208ENST00000493653 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
PDS5B-208ENST00000493653 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
PDS5B-208ENST00000493653 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.3
PDS5B-208ENST00000493653 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.3
PDS5B-208ENST00000493653 LMO7Q8WWI1 1683 aa16.95■□□□□ 0.3
PDS5B-208ENST00000493653 NEUROD1Q13562 356 aa16.95■□□□□ 0.3
PDS5B-208ENST00000493653 ZRANB1Q9UGI0 708 aa16.95■□□□□ 0.3
PDS5B-208ENST00000493653 USP19O94966 1318 aa16.95■□□□□ 0.3
PDS5B-208ENST00000493653 RGPD1P0DJD0 1748 aa16.94■□□□□ 0.3
PDS5B-208ENST00000493653 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
PDS5B-208ENST00000493653 SF3B2Q13435 895 aaKnown RBP16.94■□□□□ 0.3
PDS5B-208ENST00000493653 DEFB132Q7Z7B7 95 aa16.94■□□□□ 0.3
PDS5B-208ENST00000493653 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
PDS5B-208ENST00000493653 ABTB2Q8N961 1025 aa16.93■□□□□ 0.3
PDS5B-208ENST00000493653 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
PDS5B-208ENST00000493653 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
PDS5B-208ENST00000493653 USP6P35125 1406 aa16.93■□□□□ 0.3
PDS5B-208ENST00000493653 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
PDS5B-208ENST00000493653 TNS1Q9HBL0 1735 aaKnown RBP16.91■□□□□ 0.3
PDS5B-208ENST00000493653 SPATA31A1Q5TZJ5 1347 aa16.91■□□□□ 0.3
PDS5B-208ENST00000493653 CAMTA1Q9Y6Y1 1673 aa16.91■□□□□ 0.3
PDS5B-208ENST00000493653 SLIT3O75094 1523 aa16.91■□□□□ 0.3
PDS5B-208ENST00000493653 CPDO75976 1380 aa16.9■□□□□ 0.3
PDS5B-208ENST00000493653 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
PDS5B-208ENST00000493653 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
PDS5B-208ENST00000493653 AKAP12Q02952 1782 aa16.89■□□□□ 0.29
PDS5B-208ENST00000493653 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
PDS5B-208ENST00000493653 COL5A2P05997 1499 aaPredicted RBP16.88■□□□□ 0.29
PDS5B-208ENST00000493653 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
PDS5B-208ENST00000493653 USP35Q9P2H5 1018 aa16.88■□□□□ 0.29
PDS5B-208ENST00000493653 NLRP13Q86W25 1043 aa16.87■□□□□ 0.29
PDS5B-208ENST00000493653 BAG6P46379 1132 aa16.86■□□□□ 0.29
PDS5B-208ENST00000493653 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
PDS5B-208ENST00000493653 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
PDS5B-208ENST00000493653 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
PDS5B-208ENST00000493653 GCP02774 474 aa16.84■□□□□ 0.29
PDS5B-208ENST00000493653 EVA1CP58658 441 aa16.84■□□□□ 0.29
PDS5B-208ENST00000493653 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
PDS5B-208ENST00000493653 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
PDS5B-208ENST00000493653 DISP2A7MBM2 1401 aa16.83■□□□□ 0.28
PDS5B-208ENST00000493653 NLRP6P59044 892 aa16.83■□□□□ 0.28
PDS5B-208ENST00000493653 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
PDS5B-208ENST00000493653 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
PDS5B-208ENST00000493653 LRRC37A3O60309 1634 aa16.82■□□□□ 0.28
PDS5B-208ENST00000493653 CPSF1Q10570 1443 aaKnown RBP16.82■□□□□ 0.28
PDS5B-208ENST00000493653 SBNO2Q9Y2G9 1366 aa16.82■□□□□ 0.28
PDS5B-208ENST00000493653 LRP5O75197 1615 aa16.81■□□□□ 0.28
PDS5B-208ENST00000493653 CRB1P82279 1406 aa16.81■□□□□ 0.28
PDS5B-208ENST00000493653 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
PDS5B-208ENST00000493653 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
PDS5B-208ENST00000493653 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms