RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
NFIA-213ENST00000493627 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
NFIA-213ENST00000493627 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
NFIA-213ENST00000493627 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
NFIA-213ENST00000493627 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
NFIA-213ENST00000493627 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
NFIA-213ENST00000493627 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
NFIA-213ENST00000493627 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
NFIA-213ENST00000493627 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
NFIA-213ENST00000493627 BTG4Q9NY30 223 aa13.22□□□□□ -0.29
NFIA-213ENST00000493627 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.29
NFIA-213ENST00000493627 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
NFIA-213ENST00000493627 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
NFIA-213ENST00000493627 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.29
NFIA-213ENST00000493627 A0A0G2JS52 829 aa13.2□□□□□ -0.3
NFIA-213ENST00000493627 MYT1Q01538 1121 aa13.2□□□□□ -0.3
NFIA-213ENST00000493627 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
NFIA-213ENST00000493627 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
NFIA-213ENST00000493627 KRT27Q7Z3Y8 459 aa13.19□□□□□ -0.3
NFIA-213ENST00000493627 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
NFIA-213ENST00000493627 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
NFIA-213ENST00000493627 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
NFIA-213ENST00000493627 ACEP12821 1306 aa13.18□□□□□ -0.3
NFIA-213ENST00000493627 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
NFIA-213ENST00000493627 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
NFIA-213ENST00000493627 NRKQ7Z2Y5 1582 aa13.18□□□□□ -0.3
NFIA-213ENST00000493627 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
NFIA-213ENST00000493627 QRICH2Q9H0J4 1663 aa13.17□□□□□ -0.3
NFIA-213ENST00000493627 THSD7AQ9UPZ6 1657 aa13.17□□□□□ -0.3
NFIA-213ENST00000493627 SPATA31A5Q5VU36 1347 aa13.16□□□□□ -0.3
NFIA-213ENST00000493627 SPATA31A7Q8IWB4 1347 aa13.16□□□□□ -0.3
NFIA-213ENST00000493627 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
NFIA-213ENST00000493627 SRPK2P78362 688 aaKnown RBP13.16□□□□□ -0.3
NFIA-213ENST00000493627 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
NFIA-213ENST00000493627 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
NFIA-213ENST00000493627 NUTM2GQ5VZR2 741 aa13.16□□□□□ -0.3
NFIA-213ENST00000493627 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
NFIA-213ENST00000493627 CHRNA2Q15822 529 aa13.15□□□□□ -0.3
NFIA-213ENST00000493627 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
NFIA-213ENST00000493627 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
NFIA-213ENST00000493627 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
NFIA-213ENST00000493627 USP19O94966 1318 aa13.13□□□□□ -0.31
NFIA-213ENST00000493627 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
NFIA-213ENST00000493627 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
NFIA-213ENST00000493627 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
NFIA-213ENST00000493627 CPDO75976 1380 aa13.12□□□□□ -0.31
NFIA-213ENST00000493627 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
NFIA-213ENST00000493627 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
NFIA-213ENST00000493627 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
NFIA-213ENST00000493627 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
NFIA-213ENST00000493627 BRD4O60885 1362 aaPredicted RBP13.11□□□□□ -0.31
NFIA-213ENST00000493627 BAG6P46379 1132 aa13.11□□□□□ -0.31
NFIA-213ENST00000493627 USP6P35125 1406 aa13.11□□□□□ -0.31
NFIA-213ENST00000493627 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
NFIA-213ENST00000493627 ROCK2O75116 1388 aaKnown RBP13.1□□□□□ -0.31
NFIA-213ENST00000493627 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
NFIA-213ENST00000493627 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
NFIA-213ENST00000493627 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
NFIA-213ENST00000493627 NLRP13Q86W25 1043 aa13.09□□□□□ -0.31
NFIA-213ENST00000493627 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
NFIA-213ENST00000493627 DISP2A7MBM2 1401 aa13.08□□□□□ -0.32
NFIA-213ENST00000493627 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
NFIA-213ENST00000493627 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
NFIA-213ENST00000493627 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
NFIA-213ENST00000493627 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
NFIA-213ENST00000493627 SLIT3O75094 1523 aa13.08□□□□□ -0.32
NFIA-213ENST00000493627 GCP02774 474 aa13.07□□□□□ -0.32
NFIA-213ENST00000493627 EVA1CP58658 441 aa13.07□□□□□ -0.32
NFIA-213ENST00000493627 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
NFIA-213ENST00000493627 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
NFIA-213ENST00000493627 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
NFIA-213ENST00000493627 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
NFIA-213ENST00000493627 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
NFIA-213ENST00000493627 LRP5O75197 1615 aa13.04□□□□□ -0.32
NFIA-213ENST00000493627 NLRP6P59044 892 aa13.04□□□□□ -0.32
NFIA-213ENST00000493627 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
NFIA-213ENST00000493627 ZBTB7CA1YPR0 619 aa13.03□□□□□ -0.32
NFIA-213ENST00000493627 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
NFIA-213ENST00000493627 TRIM37O94972 964 aa13.03□□□□□ -0.32
NFIA-213ENST00000493627 AATKQ6ZMQ8 1374 aa13.03□□□□□ -0.32
NFIA-213ENST00000493627 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
NFIA-213ENST00000493627 CRB1P82279 1406 aa13.03□□□□□ -0.32
NFIA-213ENST00000493627 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.32
NFIA-213ENST00000493627 AKAP12Q02952 1782 aa13.02□□□□□ -0.32
NFIA-213ENST00000493627 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
NFIA-213ENST00000493627 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.33
NFIA-213ENST00000493627 CPSF1Q10570 1443 aaKnown RBP13.02□□□□□ -0.33
NFIA-213ENST00000493627 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
NFIA-213ENST00000493627 PARD3Q8TEW0 1356 aa13.01□□□□□ -0.33
NFIA-213ENST00000493627 LRRC37A3O60309 1634 aa13□□□□□ -0.33
NFIA-213ENST00000493627 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
NFIA-213ENST00000493627 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
NFIA-213ENST00000493627 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
NFIA-213ENST00000493627 COL18A1P39060 1754 aa12.99□□□□□ -0.33
NFIA-213ENST00000493627 KTN1Q86UP2 1357 aaKnown RBP12.99□□□□□ -0.33
NFIA-213ENST00000493627 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
NFIA-213ENST00000493627 MSH5O43196 834 aa12.99□□□□□ -0.33
NFIA-213ENST00000493627 CARD11Q9BXL7 1154 aa12.99□□□□□ -0.33
NFIA-213ENST00000493627 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
NFIA-213ENST00000493627 NFAT5O94916 1531 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms