RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 SETQ01105 290 aaPredicted RBP16.36■□□□□ 0.21
TRIM11-204ENST00000493030 R3HCC1Q9Y3T6 440 aaKnown RBP16.36■□□□□ 0.21
TRIM11-204ENST00000493030 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
TRIM11-204ENST00000493030 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 OFD1O75665 1012 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 NEK4P51957 841 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 PDILTQ8N807 584 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 KIF21BO75037 1637 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
TRIM11-204ENST00000493030 RNF214Q8ND24 703 aa16.35■□□□□ 0.21
TRIM11-204ENST00000493030 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
TRIM11-204ENST00000493030 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
TRIM11-204ENST00000493030 ODF2Q5BJF6 829 aa16.35■□□□□ 0.21
TRIM11-204ENST00000493030 CABP1Q9NZU7 370 aa16.35■□□□□ 0.21
TRIM11-204ENST00000493030 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
TRIM11-204ENST00000493030 NESP48681 1621 aa16.35■□□□□ 0.21
TRIM11-204ENST00000493030 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
TRIM11-204ENST00000493030 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
TRIM11-204ENST00000493030 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
TRIM11-204ENST00000493030 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
TRIM11-204ENST00000493030 GNAI2P04899 355 aa16.34■□□□□ 0.21
TRIM11-204ENST00000493030 NAT10Q9H0A0 1025 aaKnown RBP16.34■□□□□ 0.21
TRIM11-204ENST00000493030 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
TRIM11-204ENST00000493030 TTC39AQ5SRH9 613 aa16.34■□□□□ 0.21
TRIM11-204ENST00000493030 PDZRN3Q9UPQ7 1066 aa16.34■□□□□ 0.21
TRIM11-204ENST00000493030 ZFYVE27Q5T4F4 411 aa16.33■□□□□ 0.21
TRIM11-204ENST00000493030 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.21
TRIM11-204ENST00000493030 ZNF771Q7L3S4 317 aaPredicted RBP16.33■□□□□ 0.21
TRIM11-204ENST00000493030 SIL1Q9H173 461 aa16.33■□□□□ 0.21
TRIM11-204ENST00000493030 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
TRIM11-204ENST00000493030 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
TRIM11-204ENST00000493030 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
TRIM11-204ENST00000493030 MNS1Q8NEH6 495 aa16.33■□□□□ 0.2
TRIM11-204ENST00000493030 CABP4P57796 275 aa16.33■□□□□ 0.2
TRIM11-204ENST00000493030 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
TRIM11-204ENST00000493030 KRI1Q8N9T8 703 aaKnown RBP16.32■□□□□ 0.2
TRIM11-204ENST00000493030 CCDC158Q5M9N0 1113 aa16.32■□□□□ 0.2
TRIM11-204ENST00000493030 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
TRIM11-204ENST00000493030 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
TRIM11-204ENST00000493030 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
TRIM11-204ENST00000493030 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
TRIM11-204ENST00000493030 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
TRIM11-204ENST00000493030 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
TRIM11-204ENST00000493030 ZNF530Q6P9A1 599 aaPredicted RBP16.31■□□□□ 0.2
TRIM11-204ENST00000493030 TTLL5Q6EMB2 1281 aa16.31■□□□□ 0.2
TRIM11-204ENST00000493030 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
TRIM11-204ENST00000493030 HIP1O00291 1037 aa16.31■□□□□ 0.2
TRIM11-204ENST00000493030 MYL6BP14649 208 aa16.31■□□□□ 0.2
TRIM11-204ENST00000493030 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
TRIM11-204ENST00000493030 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
TRIM11-204ENST00000493030 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
TRIM11-204ENST00000493030 TOPBP1Q92547 1522 aa16.3■□□□□ 0.2
TRIM11-204ENST00000493030 BCAR3O75815 825 aa16.3■□□□□ 0.2
TRIM11-204ENST00000493030 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
TRIM11-204ENST00000493030 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
TRIM11-204ENST00000493030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.24e-6■■■■■ 46.9
TRIM11-204ENST00000493030 PRG4Q92954 1404 aaPredicted RBP16.3■□□□□ 0.2
TRIM11-204ENST00000493030 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
TRIM11-204ENST00000493030 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
TRIM11-204ENST00000493030 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
TRIM11-204ENST00000493030 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
TRIM11-204ENST00000493030 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
TRIM11-204ENST00000493030 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
TRIM11-204ENST00000493030 TMEM132AQ24JP5 1023 aa16.29■□□□□ 0.2
TRIM11-204ENST00000493030 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
TRIM11-204ENST00000493030 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
TRIM11-204ENST00000493030 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
TRIM11-204ENST00000493030 MAP4K4O95819 1239 aaPredicted RBP16.28■□□□□ 0.2
TRIM11-204ENST00000493030 FIBPO43427 364 aa16.28■□□□□ 0.2
TRIM11-204ENST00000493030 TEX35Q5T0J7 233 aa16.28■□□□□ 0.2
TRIM11-204ENST00000493030 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
TRIM11-204ENST00000493030 TRIM5Q9C035 493 aa16.28■□□□□ 0.2
TRIM11-204ENST00000493030 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
TRIM11-204ENST00000493030 STK3Q13188 491 aa16.27■□□□□ 0.2
TRIM11-204ENST00000493030 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
TRIM11-204ENST00000493030 SCAPERQ9BY12 1400 aa16.27■□□□□ 0.2
TRIM11-204ENST00000493030 PRPF40AO75400 957 aaKnown RBP16.27■□□□□ 0.19
TRIM11-204ENST00000493030 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.19
TRIM11-204ENST00000493030 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.27■□□□□ 0.19
TRIM11-204ENST00000493030 SMC2O95347 1197 aa16.27■□□□□ 0.19
TRIM11-204ENST00000493030 PDCP20941 246 aa16.27■□□□□ 0.19
TRIM11-204ENST00000493030 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
TRIM11-204ENST00000493030 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
TRIM11-204ENST00000493030 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
TRIM11-204ENST00000493030 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
TRIM11-204ENST00000493030 CCT4P50991 539 aaKnown RBP16.26■□□□□ 0.19
TRIM11-204ENST00000493030 STK38Q15208 465 aa16.26■□□□□ 0.19
TRIM11-204ENST00000493030 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
TRIM11-204ENST00000493030 ARGLU1Q9NWB6 273 aaPredicted RBP16.26■□□□□ 0.19
TRIM11-204ENST00000493030 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
TRIM11-204ENST00000493030 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
TRIM11-204ENST00000493030 KRT18P05783 430 aaKnown RBP16.25■□□□□ 0.19
TRIM11-204ENST00000493030 TXLNAP40222 546 aa16.25■□□□□ 0.19
TRIM11-204ENST00000493030 RRS1Q15050 365 aaKnown RBP16.25■□□□□ 0.19
TRIM11-204ENST00000493030 AK7Q96M32 723 aa16.25■□□□□ 0.19
TRIM11-204ENST00000493030 XPCQ01831 940 aaPredicted RBP16.25■□□□□ 0.19
TRIM11-204ENST00000493030 RABEP1Q15276 862 aa16.25■□□□□ 0.19
TRIM11-204ENST00000493030 TRAK2O60296 914 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms