RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ONECUT3O60422 494 aaPredicted RBP21.54■■□□□ 1.04
CDC42SE1-205ENST00000491825 NGDNQ8NEJ9 315 aaKnown RBP21.54■■□□□ 1.04
CDC42SE1-205ENST00000491825 NUDT16Q96DE0 195 aaKnown RBP21.54■■□□□ 1.04
CDC42SE1-205ENST00000491825 NRAPQ86VF7 1730 aa21.54■■□□□ 1.04
CDC42SE1-205ENST00000491825 CCDC125Q86Z20 511 aa21.53■■□□□ 1.04
CDC42SE1-205ENST00000491825 SEPT12Q8IYM1 358 aa21.53■■□□□ 1.04
CDC42SE1-205ENST00000491825 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
CDC42SE1-205ENST00000491825 NBPF1Q3BBV0 1214 aa21.52■■□□□ 1.04
CDC42SE1-205ENST00000491825 POLR3AO14802 1390 aaPredicted RBP21.51■■□□□ 1.03
CDC42SE1-205ENST00000491825 TOPAZ1Q8N9V7 1692 aa21.51■■□□□ 1.03
CDC42SE1-205ENST00000491825 CDK19Q9BWU1 502 aa21.51■■□□□ 1.03
CDC42SE1-205ENST00000491825 ITSN1Q15811 1721 aa21.51■■□□□ 1.03
CDC42SE1-205ENST00000491825 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
CDC42SE1-205ENST00000491825 BLMP54132 1417 aaPredicted RBP21.5■■□□□ 1.03
CDC42SE1-205ENST00000491825 COL14A1Q05707 1796 aaKnown RBP21.5■■□□□ 1.03
CDC42SE1-205ENST00000491825 BTG4Q9NY30 223 aa21.49■■□□□ 1.03
CDC42SE1-205ENST00000491825 BRWD3Q6RI45 1802 aa21.48■■□□□ 1.03
CDC42SE1-205ENST00000491825 PAK3O75914 559 aaPredicted RBP21.47■■□□□ 1.03
CDC42SE1-205ENST00000491825 CCDC9Q9Y3X0 531 aaKnown RBP21.47■■□□□ 1.03
CDC42SE1-205ENST00000491825 CCDC61Q9Y6R9 512 aa21.46■■□□□ 1.03
CDC42SE1-205ENST00000491825 PLEKHG3A1L390 1219 aa21.45■■□□□ 1.02
CDC42SE1-205ENST00000491825 ACEP12821 1306 aa21.45■■□□□ 1.02
CDC42SE1-205ENST00000491825 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
CDC42SE1-205ENST00000491825 PHRF1Q9P1Y6 1649 aaKnown RBP21.44■■□□□ 1.02
CDC42SE1-205ENST00000491825 NBPF8Q3BBV2 869 aa21.43■■□□□ 1.02
CDC42SE1-205ENST00000491825 SPATA31A5Q5VU36 1347 aa21.43■■□□□ 1.02
CDC42SE1-205ENST00000491825 SPATA31A7Q8IWB4 1347 aa21.43■■□□□ 1.02
CDC42SE1-205ENST00000491825 KIAA0232Q92628 1395 aa21.43■■□□□ 1.02
CDC42SE1-205ENST00000491825 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
CDC42SE1-205ENST00000491825 CENPJQ9HC77 1338 aaPredicted RBP21.42■■□□□ 1.02
CDC42SE1-205ENST00000491825 PRDM11Q9NQV5 511 aa21.42■■□□□ 1.02
CDC42SE1-205ENST00000491825 ZRANB1Q9UGI0 708 aa21.42■■□□□ 1.02
CDC42SE1-205ENST00000491825 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
CDC42SE1-205ENST00000491825 DEFB132Q7Z7B7 95 aa21.39■■□□□ 1.01
CDC42SE1-205ENST00000491825 NRKQ7Z2Y5 1582 aa21.39■■□□□ 1.01
CDC42SE1-205ENST00000491825 PPIP5K1Q6PFW1 1433 aa21.38■■□□□ 1.01
CDC42SE1-205ENST00000491825 USP19O94966 1318 aa21.38■■□□□ 1.01
CDC42SE1-205ENST00000491825 NUTM2GQ5VZR2 741 aa21.38■■□□□ 1.01
CDC42SE1-205ENST00000491825 CHRNA2Q15822 529 aa21.37■■□□□ 1.01
CDC42SE1-205ENST00000491825 SPATA31A1Q5TZJ5 1347 aa21.36■■□□□ 1.01
CDC42SE1-205ENST00000491825 A0A0G2JS52 829 aa21.36■■□□□ 1.01
CDC42SE1-205ENST00000491825 SRPK2P78362 688 aaKnown RBP21.36■■□□□ 1.01
CDC42SE1-205ENST00000491825 MYT1Q01538 1121 aa21.36■■□□□ 1.01
CDC42SE1-205ENST00000491825 CABP2Q9NPB3 220 aa21.36■■□□□ 1.01
CDC42SE1-205ENST00000491825 QRICH2Q9H0J4 1663 aa21.35■■□□□ 1.01
CDC42SE1-205ENST00000491825 ZC3H6P61129 1189 aaKnown RBP21.35■■□□□ 1.01
CDC42SE1-205ENST00000491825 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
CDC42SE1-205ENST00000491825 CPDO75976 1380 aa21.35■■□□□ 1.01
CDC42SE1-205ENST00000491825 SF3B2Q13435 895 aaKnown RBP21.33■■□□□ 1.01
CDC42SE1-205ENST00000491825 ABTB2Q8N961 1025 aa21.33■■□□□ 1.01
CDC42SE1-205ENST00000491825 BRD4O60885 1362 aaPredicted RBP21.33■■□□□ 1
CDC42SE1-205ENST00000491825 SSH2Q76I76 1423 aa21.32■■□□□ 1
CDC42SE1-205ENST00000491825 LMO7Q8WWI1 1683 aa21.32■■□□□ 1
CDC42SE1-205ENST00000491825 CAMTA1Q9Y6Y1 1673 aa21.31■■□□□ 1
CDC42SE1-205ENST00000491825 USP6P35125 1406 aa21.31■■□□□ 1
CDC42SE1-205ENST00000491825 FAM182BQ5T319 152 aa21.3■■□□□ 1
CDC42SE1-205ENST00000491825 STRN4Q9NRL3 753 aa21.29■■□□□ 1
CDC42SE1-205ENST00000491825 CABP1Q9NZU7 370 aa21.29■■□□□ 1
CDC42SE1-205ENST00000491825 GCP02774 474 aa21.28■■□□□ 1
CDC42SE1-205ENST00000491825 NLRP13Q86W25 1043 aa21.28■■□□□ 1
CDC42SE1-205ENST00000491825 DISP2A7MBM2 1401 aa21.28■■□□□ 1
CDC42SE1-205ENST00000491825 BAG6P46379 1132 aa21.27■■□□□ 1
CDC42SE1-205ENST00000491825 SLIT3O75094 1523 aa21.27■■□□□ 1
CDC42SE1-205ENST00000491825 BARGINQ6ZT62 677 aa21.26■□□□□ 0.99
CDC42SE1-205ENST00000491825 EVC2Q86UK5 1308 aa21.26■□□□□ 0.99
CDC42SE1-205ENST00000491825 RGPD1P0DJD0 1748 aa21.25■□□□□ 0.99
CDC42SE1-205ENST00000491825 LARP1Q6PKG0 1096 aaKnown RBP21.25■□□□□ 0.99
CDC42SE1-205ENST00000491825 COL5A2P05997 1499 aaPredicted RBP21.25■□□□□ 0.99
CDC42SE1-205ENST00000491825 TNS1Q9HBL0 1735 aaKnown RBP21.24■□□□□ 0.99
CDC42SE1-205ENST00000491825 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
CDC42SE1-205ENST00000491825 USP35Q9P2H5 1018 aa21.23■□□□□ 0.99
CDC42SE1-205ENST00000491825 PIK3C2AO00443 1686 aa21.22■□□□□ 0.99
CDC42SE1-205ENST00000491825 EVA1CP58658 441 aa21.21■□□□□ 0.99
CDC42SE1-205ENST00000491825 EN1Q05925 392 aaPredicted RBP21.21■□□□□ 0.99
CDC42SE1-205ENST00000491825 TCP11L2Q8N4U5 519 aa21.21■□□□□ 0.99
CDC42SE1-205ENST00000491825 NLRP6P59044 892 aa21.2■□□□□ 0.98
CDC42SE1-205ENST00000491825 AATKQ6ZMQ8 1374 aa21.2■□□□□ 0.98
CDC42SE1-205ENST00000491825 SBNO2Q9Y2G9 1366 aa21.2■□□□□ 0.98
CDC42SE1-205ENST00000491825 CPSF1Q10570 1443 aaKnown RBP21.2■□□□□ 0.98
CDC42SE1-205ENST00000491825 FAM196AQ6ZSG2 479 aa21.19■□□□□ 0.98
CDC42SE1-205ENST00000491825 THRAP3Q9Y2W1 955 aaKnown RBP21.18■□□□□ 0.98
CDC42SE1-205ENST00000491825 CRB1P82279 1406 aa21.18■□□□□ 0.98
CDC42SE1-205ENST00000491825 TTC21BQ7Z4L5 1316 aa21.17■□□□□ 0.98
CDC42SE1-205ENST00000491825 LRP5O75197 1615 aa21.17■□□□□ 0.98
CDC42SE1-205ENST00000491825 TRIM37O94972 964 aa21.16■□□□□ 0.98
CDC42SE1-205ENST00000491825 ZNF692Q9BU19 519 aaPredicted RBP21.16■□□□□ 0.98
CDC42SE1-205ENST00000491825 USP47Q96K76 1375 aa21.15■□□□□ 0.98
CDC42SE1-205ENST00000491825 PSDA5PKW4 1024 aaPredicted RBP21.15■□□□□ 0.98
CDC42SE1-205ENST00000491825 CAMKK2Q96RR4 588 aa21.15■□□□□ 0.98
CDC42SE1-205ENST00000491825 COL18A1P39060 1754 aa21.15■□□□□ 0.98
CDC42SE1-205ENST00000491825 AKAP12Q02952 1782 aa21.15■□□□□ 0.98
CDC42SE1-205ENST00000491825 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
CDC42SE1-205ENST00000491825 PDE3BQ13370 1112 aa21.14■□□□□ 0.97
CDC42SE1-205ENST00000491825 EZH2Q15910 746 aaKnown RBP21.14■□□□□ 0.97
CDC42SE1-205ENST00000491825 TTC21AQ8NDW8 1320 aa21.13■□□□□ 0.97
CDC42SE1-205ENST00000491825 PARD3Q8TEW0 1356 aa21.12■□□□□ 0.97
CDC42SE1-205ENST00000491825 ARHGEF25Q86VW2 580 aa21.12■□□□□ 0.97
CDC42SE1-205ENST00000491825 AXIN2Q9Y2T1 843 aa21.12■□□□□ 0.97
CDC42SE1-205ENST00000491825 NFAT5O94916 1531 aa21.12■□□□□ 0.97
CDC42SE1-205ENST00000491825 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms