RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 KIF7Q2M1P5 1343 aa21.95■■□□□ 1.1
TRA2A-208ENST00000490942 A0A1W2PP64 1363 aa21.95■■□□□ 1.1
TRA2A-208ENST00000490942 KTN1Q86UP2 1357 aaKnown RBP21.95■■□□□ 1.1
TRA2A-208ENST00000490942 PNPLA6Q8IY17 1366 aa21.95■■□□□ 1.1
TRA2A-208ENST00000490942 TTC21AQ8NDW8 1320 aa21.94■■□□□ 1.1
TRA2A-208ENST00000490942 MYOM1P52179 1685 aa21.93■■□□□ 1.1
TRA2A-208ENST00000490942 EDC4Q6P2E9 1401 aaKnown RBP21.93■■□□□ 1.1
TRA2A-208ENST00000490942 MON2Q7Z3U7 1717 aa21.93■■□□□ 1.1
TRA2A-208ENST00000490942 COL22A1Q8NFW1 1626 aaPredicted RBP21.93■■□□□ 1.1
TRA2A-208ENST00000490942 CCDC7Q96M83 1385 aa21.93■■□□□ 1.1
TRA2A-208ENST00000490942 ALS2Q96Q42 1657 aa21.91■■□□□ 1.1
TRA2A-208ENST00000490942 NRKQ7Z2Y5 1582 aa21.91■■□□□ 1.1
TRA2A-208ENST00000490942 WASHC2AQ641Q2 1341 aa21.9■■□□□ 1.1
TRA2A-208ENST00000490942 TTC21BQ7Z4L5 1316 aa21.9■■□□□ 1.1
TRA2A-208ENST00000490942 MED1Q15648 1581 aaPredicted RBP21.89■■□□□ 1.09
TRA2A-208ENST00000490942 PAK3O75914 559 aaPredicted RBP21.88■■□□□ 1.09
TRA2A-208ENST00000490942 ABTB2Q8N961 1025 aa21.86■■□□□ 1.09
TRA2A-208ENST00000490942 POLR3GLQ9BT43 218 aa21.86■■□□□ 1.09
TRA2A-208ENST00000490942 USP31Q70CQ4 1352 aa21.86■■□□□ 1.09
TRA2A-208ENST00000490942 NLRP13Q86W25 1043 aa21.85■■□□□ 1.09
TRA2A-208ENST00000490942 USP19O94966 1318 aa21.83■■□□□ 1.09
TRA2A-208ENST00000490942 LMOD2Q6P5Q4 547 aa21.83■■□□□ 1.09
TRA2A-208ENST00000490942 CARD14Q9BXL6 1004 aa21.82■■□□□ 1.08
TRA2A-208ENST00000490942 PANK3Q9H999 370 aa21.82■■□□□ 1.08
TRA2A-208ENST00000490942 PIK3C2AO00443 1686 aa21.81■■□□□ 1.08
TRA2A-208ENST00000490942 USP54Q70EL1 1684 aa21.81■■□□□ 1.08
TRA2A-208ENST00000490942 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
TRA2A-208ENST00000490942 NLRP6P59044 892 aa21.79■■□□□ 1.08
TRA2A-208ENST00000490942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.79■■□□□ 1.08
TRA2A-208ENST00000490942 CGNL1Q0VF96 1302 aa21.79■■□□□ 1.08
TRA2A-208ENST00000490942 SLIT3O75094 1523 aa21.78■■□□□ 1.08
TRA2A-208ENST00000490942 CRYBG1Q9Y4K1 1723 aa21.77■■□□□ 1.08
TRA2A-208ENST00000490942 LRP6O75581 1613 aa21.77■■□□□ 1.08
TRA2A-208ENST00000490942 KCNH5Q8NCM2 988 aa21.77■■□□□ 1.08
TRA2A-208ENST00000490942 OVOS2A0A0J9YW53 1432 aa21.77■■□□□ 1.08
TRA2A-208ENST00000490942 OVOS2Q6IE36 1432 aa21.77■■□□□ 1.08
TRA2A-208ENST00000490942 NSD2O96028 1365 aa21.76■■□□□ 1.07
TRA2A-208ENST00000490942 FYB1O15117 783 aa21.76■■□□□ 1.07
TRA2A-208ENST00000490942 NME9Q86XW9 330 aa21.76■■□□□ 1.07
TRA2A-208ENST00000490942 ABCA3Q99758 1704 aa21.76■■□□□ 1.07
TRA2A-208ENST00000490942 PER1O15534 1290 aaPredicted RBP21.74■■□□□ 1.07
TRA2A-208ENST00000490942 GCP02774 474 aa21.74■■□□□ 1.07
TRA2A-208ENST00000490942 HAP1P54257 671 aaPredicted RBP21.74■■□□□ 1.07
TRA2A-208ENST00000490942 KNSTRNQ9Y448 316 aa21.74■■□□□ 1.07
TRA2A-208ENST00000490942 CPDO75976 1380 aa21.74■■□□□ 1.07
TRA2A-208ENST00000490942 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
TRA2A-208ENST00000490942 NUTM2BA6NNL0 878 aaPredicted RBP21.73■■□□□ 1.07
TRA2A-208ENST00000490942 NUTM2EB1AL46 878 aaPredicted RBP21.73■■□□□ 1.07
TRA2A-208ENST00000490942 NUTM2GQ5VZR2 741 aa21.73■■□□□ 1.07
TRA2A-208ENST00000490942 NUTM2AQ8IVF1 878 aaPredicted RBP21.73■■□□□ 1.07
TRA2A-208ENST00000490942 CABLES1Q8TDN4 633 aa21.73■■□□□ 1.07
TRA2A-208ENST00000490942 COG3Q96JB2 828 aa21.73■■□□□ 1.07
TRA2A-208ENST00000490942 NPC1L1Q9UHC9 1359 aa21.73■■□□□ 1.07
TRA2A-208ENST00000490942 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
TRA2A-208ENST00000490942 MARF1Q9Y4F3 1742 aaKnown RBP21.71■■□□□ 1.07
TRA2A-208ENST00000490942 KIF20BQ96Q89 1820 aa21.7■■□□□ 1.06
TRA2A-208ENST00000490942 MEX3CQ5U5Q3 659 aaKnown RBP21.69■■□□□ 1.06
TRA2A-208ENST00000490942 ADAMTS2O95450 1211 aa21.68■■□□□ 1.06
TRA2A-208ENST00000490942 AMER1Q5JTC6 1135 aaPredicted RBP21.68■■□□□ 1.06
TRA2A-208ENST00000490942 FNBP4Q8N3X1 1017 aaPredicted RBP21.68■■□□□ 1.06
TRA2A-208ENST00000490942 NFAT5O94916 1531 aa21.68■■□□□ 1.06
TRA2A-208ENST00000490942 GGNBP2Q9H3C7 697 aa21.67■■□□□ 1.06
TRA2A-208ENST00000490942 ZRANB1Q9UGI0 708 aa21.67■■□□□ 1.06
TRA2A-208ENST00000490942 ABCC6O95255 1503 aa21.66■■□□□ 1.06
TRA2A-208ENST00000490942 KIAA0232Q92628 1395 aa21.65■■□□□ 1.06
TRA2A-208ENST00000490942 ARHGEF25Q86VW2 580 aa21.65■■□□□ 1.06
TRA2A-208ENST00000490942 PRDM11Q9NQV5 511 aa21.65■■□□□ 1.06
TRA2A-208ENST00000490942 SLIT2O94813 1529 aa21.65■■□□□ 1.06
TRA2A-208ENST00000490942 COL14A1Q05707 1796 aaKnown RBP21.64■■□□□ 1.06
TRA2A-208ENST00000490942 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.06
TRA2A-208ENST00000490942 NGLY1Q96IV0 654 aa21.64■■□□□ 1.05
TRA2A-208ENST00000490942 ANKRD26Q9UPS8 1709 aa21.63■■□□□ 1.05
TRA2A-208ENST00000490942 KIF24Q5T7B8 1368 aa21.63■■□□□ 1.05
TRA2A-208ENST00000490942 FAM83GA6ND36 823 aa21.63■■□□□ 1.05
TRA2A-208ENST00000490942 C8orf37Q96NL8 207 aa21.63■■□□□ 1.05
TRA2A-208ENST00000490942 ZC3H6P61129 1189 aaKnown RBP21.62■■□□□ 1.05
TRA2A-208ENST00000490942 ZNF772Q68DY9 489 aaPredicted RBP21.62■■□□□ 1.05
TRA2A-208ENST00000490942 NWD2Q9ULI1 1742 aa21.61■■□□□ 1.05
TRA2A-208ENST00000490942 PLEKHG5O94827 1062 aa21.61■■□□□ 1.05
TRA2A-208ENST00000490942 AFF2P51816 1311 aa21.59■■□□□ 1.05
TRA2A-208ENST00000490942 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
TRA2A-208ENST00000490942 RTL1A6NKG5 1358 aa21.59■■□□□ 1.05
TRA2A-208ENST00000490942 BCL9LQ86UU0 1499 aa21.58■■□□□ 1.05
TRA2A-208ENST00000490942 MORC1Q86VD1 984 aa21.58■■□□□ 1.05
TRA2A-208ENST00000490942 LMO7Q8WWI1 1683 aa21.58■■□□□ 1.05
TRA2A-208ENST00000490942 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.04
TRA2A-208ENST00000490942 UNC5CLQ8IV45 518 aa21.57■■□□□ 1.04
TRA2A-208ENST00000490942 USP21Q9UK80 565 aa21.57■■□□□ 1.04
TRA2A-208ENST00000490942 BLMP54132 1417 aaPredicted RBP21.56■■□□□ 1.04
TRA2A-208ENST00000490942 BTG4Q9NY30 223 aa21.56■■□□□ 1.04
TRA2A-208ENST00000490942 PLCH1Q4KWH8 1693 aa21.56■■□□□ 1.04
TRA2A-208ENST00000490942 MAP3K19Q56UN5 1328 aa21.55■■□□□ 1.04
TRA2A-208ENST00000490942 SOX12O15370 315 aa21.55■■□□□ 1.04
TRA2A-208ENST00000490942 COL18A1P39060 1754 aa21.55■■□□□ 1.04
TRA2A-208ENST00000490942 CHRNA2Q15822 529 aa21.54■■□□□ 1.04
TRA2A-208ENST00000490942 IP6K1Q92551 441 aa21.54■■□□□ 1.04
TRA2A-208ENST00000490942 RGS17Q9UGC6 210 aaPredicted RBP21.54■■□□□ 1.04
TRA2A-208ENST00000490942 TRPC5Q9UL62 973 aaPredicted RBP21.54■■□□□ 1.04
TRA2A-208ENST00000490942 CAMTA1Q9Y6Y1 1673 aa21.53■■□□□ 1.04
TRA2A-208ENST00000490942 SMG6Q86US8 1419 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms