RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 QRICH2Q9H0J4 1663 aa14.98□□□□□ -0.01
SCAMP4-208ENST00000489554 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
SCAMP4-208ENST00000489554 UNC5CLQ8IV45 518 aa14.98□□□□□ -0.01
SCAMP4-208ENST00000489554 ACEP12821 1306 aa14.97□□□□□ -0.01
SCAMP4-208ENST00000489554 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
SCAMP4-208ENST00000489554 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
SCAMP4-208ENST00000489554 EVC2Q86UK5 1308 aa14.96□□□□□ -0.01
SCAMP4-208ENST00000489554 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
SCAMP4-208ENST00000489554 PPIP5K1Q6PFW1 1433 aa14.96□□□□□ -0.01
SCAMP4-208ENST00000489554 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-208ENST00000489554 CABP2Q9NPB3 220 aa14.96□□□□□ -0.01
SCAMP4-208ENST00000489554 GJD4Q96KN9 370 aaPredicted RBP14.95□□□□□ -0.02
SCAMP4-208ENST00000489554 UPF1Q92900 1129 aaKnown RBP eCLIP14.94□□□□□ -0.02
SCAMP4-208ENST00000489554 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
SCAMP4-208ENST00000489554 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
SCAMP4-208ENST00000489554 FAM83GA6ND36 823 aa14.93□□□□□ -0.02
SCAMP4-208ENST00000489554 NWD2Q9ULI1 1742 aa14.92□□□□□ -0.02
SCAMP4-208ENST00000489554 VPS72Q15906 364 aa14.92□□□□□ -0.02
SCAMP4-208ENST00000489554 SBNO2Q9Y2G9 1366 aa14.92□□□□□ -0.02
SCAMP4-208ENST00000489554 PLCH1Q4KWH8 1693 aa14.91□□□□□ -0.02
SCAMP4-208ENST00000489554 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
SCAMP4-208ENST00000489554 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
SCAMP4-208ENST00000489554 CRYBG1Q9Y4K1 1723 aa14.9□□□□□ -0.02
SCAMP4-208ENST00000489554 ABTB2Q8N961 1025 aa14.9□□□□□ -0.02
SCAMP4-208ENST00000489554 COL14A1Q05707 1796 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-208ENST00000489554 PRDM11Q9NQV5 511 aa14.89□□□□□ -0.03
SCAMP4-208ENST00000489554 BTG4Q9NY30 223 aa14.89□□□□□ -0.03
SCAMP4-208ENST00000489554 USP6P35125 1406 aa14.89□□□□□ -0.03
SCAMP4-208ENST00000489554 GLI3P10071 1580 aa14.89□□□□□ -0.03
SCAMP4-208ENST00000489554 NUTM2GQ5VZR2 741 aa14.88□□□□□ -0.03
SCAMP4-208ENST00000489554 NLRP13Q86W25 1043 aa14.88□□□□□ -0.03
SCAMP4-208ENST00000489554 CCDC9Q9Y3X0 531 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-208ENST00000489554 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
SCAMP4-208ENST00000489554 PHRF1Q9P1Y6 1649 aaKnown RBP14.87□□□□□ -0.03
SCAMP4-208ENST00000489554 USP19O94966 1318 aa14.87□□□□□ -0.03
SCAMP4-208ENST00000489554 KIAA0232Q92628 1395 aa14.86□□□□□ -0.03
SCAMP4-208ENST00000489554 NRAPQ86VF7 1730 aa14.86□□□□□ -0.03
SCAMP4-208ENST00000489554 ONECUT3O60422 494 aaPredicted RBP14.85□□□□□ -0.03
SCAMP4-208ENST00000489554 SSH2Q76I76 1423 aa14.84□□□□□ -0.03
SCAMP4-208ENST00000489554 ZC3H6P61129 1189 aaKnown RBP14.84□□□□□ -0.03
SCAMP4-208ENST00000489554 SEPT12Q8IYM1 358 aa14.84□□□□□ -0.03
SCAMP4-208ENST00000489554 NRKQ7Z2Y5 1582 aa14.84□□□□□ -0.03
SCAMP4-208ENST00000489554 CPDO75976 1380 aa14.84□□□□□ -0.03
SCAMP4-208ENST00000489554 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
SCAMP4-208ENST00000489554 GCP02774 474 aa14.83□□□□□ -0.04
SCAMP4-208ENST00000489554 NLRP6P59044 892 aa14.83□□□□□ -0.04
SCAMP4-208ENST00000489554 CPSF1Q10570 1443 aaKnown RBP14.83□□□□□ -0.04
SCAMP4-208ENST00000489554 CHRNA2Q15822 529 aa14.82□□□□□ -0.04
SCAMP4-208ENST00000489554 PUS7Q96PZ0 661 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-208ENST00000489554 SPATA31A5Q5VU36 1347 aa14.82□□□□□ -0.04
SCAMP4-208ENST00000489554 SPATA31A7Q8IWB4 1347 aa14.82□□□□□ -0.04
SCAMP4-208ENST00000489554 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
SCAMP4-208ENST00000489554 CCDC125Q86Z20 511 aa14.81□□□□□ -0.04
SCAMP4-208ENST00000489554 TTC21BQ7Z4L5 1316 aa14.81□□□□□ -0.04
SCAMP4-208ENST00000489554 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-208ENST00000489554 A0A0G2JS52 829 aa14.8□□□□□ -0.04
SCAMP4-208ENST00000489554 MYT1Q01538 1121 aa14.8□□□□□ -0.04
SCAMP4-208ENST00000489554 FAM98CQ17RN3 349 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-208ENST00000489554 SLIT3O75094 1523 aa14.8□□□□□ -0.04
SCAMP4-208ENST00000489554 ST20-MTHFSA0A0A6YYL1 179 aa14.79□□□□□ -0.04
SCAMP4-208ENST00000489554 EVA1CP58658 441 aa14.79□□□□□ -0.04
SCAMP4-208ENST00000489554 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
SCAMP4-208ENST00000489554 KRT27Q7Z3Y8 459 aa14.79□□□□□ -0.04
SCAMP4-208ENST00000489554 USP47Q96K76 1375 aa14.79□□□□□ -0.04
SCAMP4-208ENST00000489554 TESK2Q96S53 571 aa14.79□□□□□ -0.04
SCAMP4-208ENST00000489554 STRN4Q9NRL3 753 aa14.79□□□□□ -0.04
SCAMP4-208ENST00000489554 PIK3C2AO00443 1686 aa14.78□□□□□ -0.04
SCAMP4-208ENST00000489554 SPATA31A1Q5TZJ5 1347 aa14.78□□□□□ -0.04
SCAMP4-208ENST00000489554 HDGFL2Q7Z4V5 671 aaPredicted RBP14.78□□□□□ -0.04
SCAMP4-208ENST00000489554 TMC1Q8TDI8 760 aa14.78□□□□□ -0.04
SCAMP4-208ENST00000489554 NINLQ9Y2I6 1382 aa14.77□□□□□ -0.04
SCAMP4-208ENST00000489554 HSPA5P11021 654 aaKnown RBP14.77□□□□□ -0.05
SCAMP4-208ENST00000489554 KCNH5Q8NCM2 988 aa14.77□□□□□ -0.05
SCAMP4-208ENST00000489554 TERF2IPQ9NYB0 399 aa14.77□□□□□ -0.05
SCAMP4-208ENST00000489554 LMO7Q8WWI1 1683 aa14.77□□□□□ -0.05
SCAMP4-208ENST00000489554 CAMTA1Q9Y6Y1 1673 aa14.77□□□□□ -0.05
SCAMP4-208ENST00000489554 AATKQ6ZMQ8 1374 aa14.76□□□□□ -0.05
SCAMP4-208ENST00000489554 CD163L1Q9NR16 1453 aa14.76□□□□□ -0.05
SCAMP4-208ENST00000489554 BLMP54132 1417 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-208ENST00000489554 MON2Q7Z3U7 1717 aa14.75□□□□□ -0.05
SCAMP4-208ENST00000489554 SLC12A5Q9H2X9 1139 aa14.75□□□□□ -0.05
SCAMP4-208ENST00000489554 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
SCAMP4-208ENST00000489554 ZBTB7CA1YPR0 619 aa14.74□□□□□ -0.05
SCAMP4-208ENST00000489554 BARGINQ6ZT62 677 aa14.74□□□□□ -0.05
SCAMP4-208ENST00000489554 COL5A2P05997 1499 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-208ENST00000489554 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
SCAMP4-208ENST00000489554 EDC4Q6P2E9 1401 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-208ENST00000489554 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
SCAMP4-208ENST00000489554 EIF4G2P78344 907 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCAMP4-208ENST00000489554 TMF1P82094 1093 aa14.73□□□□□ -0.05
SCAMP4-208ENST00000489554 LARP1Q6PKG0 1096 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-208ENST00000489554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCAMP4-208ENST00000489554 THRAP3Q9Y2W1 955 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-208ENST00000489554 A0A1W2PP64 1363 aa14.73□□□□□ -0.05
SCAMP4-208ENST00000489554 SF3B2Q13435 895 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-208ENST00000489554 ARHGEF25Q86VW2 580 aa14.72□□□□□ -0.05
SCAMP4-208ENST00000489554 TCP11L2Q8N4U5 519 aa14.72□□□□□ -0.05
SCAMP4-208ENST00000489554 USP35Q9P2H5 1018 aa14.72□□□□□ -0.05
SCAMP4-208ENST00000489554 CDCA8Q53HL2 280 aa14.71□□□□□ -0.05
SCAMP4-208ENST00000489554 CRB1P82279 1406 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms