RNA–Protein interactions for RNA: ENST00000489203.2

NSFL1C-209, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-209ENST00000489203 ABCA3Q99758 1704 aa31.31■■■□□ 2.6
NSFL1C-209ENST00000489203 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.3■■■□□ 2.6
NSFL1C-209ENST00000489203 GJD4Q96KN9 370 aaPredicted RBP31.29■■■□□ 2.6
NSFL1C-209ENST00000489203 EVC2Q86UK5 1308 aa31.28■■■□□ 2.6
NSFL1C-209ENST00000489203 FAM83GA6ND36 823 aa31.28■■■□□ 2.6
NSFL1C-209ENST00000489203 UPF1Q92900 1129 aaKnown RBP eCLIP31.28■■■□□ 2.6
NSFL1C-209ENST00000489203 PLEKHG5O94827 1062 aa31.27■■■□□ 2.6
NSFL1C-209ENST00000489203 PPIP5K1Q6PFW1 1433 aa31.26■■■□□ 2.6
NSFL1C-209ENST00000489203 CARD11Q9BXL7 1154 aa31.23■■■□□ 2.59
NSFL1C-209ENST00000489203 NWD2Q9ULI1 1742 aa31.23■■■□□ 2.59
NSFL1C-209ENST00000489203 RALGAPBQ86X10 1494 aa31.22■■■□□ 2.59
NSFL1C-209ENST00000489203 BRD4O60885 1362 aaPredicted RBP31.22■■■□□ 2.59
NSFL1C-209ENST00000489203 VPS72Q15906 364 aa31.22■■■□□ 2.59
NSFL1C-209ENST00000489203 CABP1Q9NZU7 370 aa31.22■■■□□ 2.59
NSFL1C-209ENST00000489203 CRYBG1Q9Y4K1 1723 aa31.21■■■□□ 2.59
NSFL1C-209ENST00000489203 SBNO2Q9Y2G9 1366 aa31.19■■■□□ 2.58
NSFL1C-209ENST00000489203 PLCH1Q4KWH8 1693 aa31.18■■■□□ 2.58
NSFL1C-209ENST00000489203 ABTB2Q8N961 1025 aa31.16■■■□□ 2.58
NSFL1C-209ENST00000489203 GLI3P10071 1580 aa31.16■■■□□ 2.58
NSFL1C-209ENST00000489203 BTG4Q9NY30 223 aa31.15■■■□□ 2.58
NSFL1C-209ENST00000489203 COL14A1Q05707 1796 aaKnown RBP31.15■■■□□ 2.58
NSFL1C-209ENST00000489203 ONECUT3O60422 494 aaPredicted RBP31.14■■■□□ 2.58
NSFL1C-209ENST00000489203 NUTM2GQ5VZR2 741 aa31.13■■■□□ 2.57
NSFL1C-209ENST00000489203 ZNF692Q9BU19 519 aaPredicted RBP31.12■■■□□ 2.57
NSFL1C-209ENST00000489203 PRDM11Q9NQV5 511 aa31.12■■■□□ 2.57
NSFL1C-209ENST00000489203 ATAD2Q6PL18 1390 aa31.12■■■□□ 2.57
NSFL1C-209ENST00000489203 USP6P35125 1406 aa31.12■■■□□ 2.57
NSFL1C-209ENST00000489203 SSH2Q76I76 1423 aa31.1■■■□□ 2.57
NSFL1C-209ENST00000489203 USP19O94966 1318 aa31.1■■■□□ 2.57
NSFL1C-209ENST00000489203 NLRP13Q86W25 1043 aa31.1■■■□□ 2.57
NSFL1C-209ENST00000489203 KIAA0232Q92628 1395 aa31.09■■■□□ 2.57
NSFL1C-209ENST00000489203 NRAPQ86VF7 1730 aa31.09■■■□□ 2.57
NSFL1C-209ENST00000489203 PHRF1Q9P1Y6 1649 aaKnown RBP31.09■■■□□ 2.57
NSFL1C-209ENST00000489203 CLSPNQ9HAW4 1339 aa31.08■■■□□ 2.57
NSFL1C-209ENST00000489203 CCDC9Q9Y3X0 531 aaKnown RBP31.07■■■□□ 2.56
NSFL1C-209ENST00000489203 TIMELESSQ9UNS1 1208 aa31.06■■■□□ 2.56
NSFL1C-209ENST00000489203 ZC3H6P61129 1189 aaKnown RBP31.05■■■□□ 2.56
NSFL1C-209ENST00000489203 SEPT12Q8IYM1 358 aa31.04■■■□□ 2.56
NSFL1C-209ENST00000489203 PUS7Q96PZ0 661 aaKnown RBP31.04■■■□□ 2.56
NSFL1C-209ENST00000489203 CPDO75976 1380 aa31.04■■■□□ 2.56
NSFL1C-209ENST00000489203 GCP02774 474 aa31.03■■■□□ 2.56
NSFL1C-209ENST00000489203 CPSF1Q10570 1443 aaKnown RBP31.03■■■□□ 2.56
NSFL1C-209ENST00000489203 SPATA31A5Q5VU36 1347 aa31.01■■■□□ 2.56
NSFL1C-209ENST00000489203 SPATA31A7Q8IWB4 1347 aa31.01■■■□□ 2.56
NSFL1C-209ENST00000489203 NLRP6P59044 892 aa31.01■■■□□ 2.55
NSFL1C-209ENST00000489203 CHRNA2Q15822 529 aa31.01■■■□□ 2.55
NSFL1C-209ENST00000489203 PCGF6Q9BYE7 350 aa31.01■■■□□ 2.55
NSFL1C-209ENST00000489203 NRKQ7Z2Y5 1582 aa31■■■□□ 2.55
NSFL1C-209ENST00000489203 TTC21BQ7Z4L5 1316 aa31■■■□□ 2.55
NSFL1C-209ENST00000489203 SLC24A1O60721 1099 aa31■■■□□ 2.55
NSFL1C-209ENST00000489203 EP400Q96L91 3159 aa30.99■■■□□ 2.55
NSFL1C-209ENST00000489203 AKAP12Q02952 1782 aa30.99■■■□□ 2.55
NSFL1C-209ENST00000489203 CCDC125Q86Z20 511 aa30.98■■■□□ 2.55
NSFL1C-209ENST00000489203 TESK2Q96S53 571 aa30.98■■■□□ 2.55
NSFL1C-209ENST00000489203 TTC21AQ8NDW8 1320 aa30.98■■■□□ 2.55
NSFL1C-209ENST00000489203 ST20-MTHFSA0A0A6YYL1 179 aa30.97■■■□□ 2.55
NSFL1C-209ENST00000489203 FAM98CQ17RN3 349 aaKnown RBP30.95■■■□□ 2.55
NSFL1C-209ENST00000489203 BRWD3Q6RI45 1802 aa30.95■■■□□ 2.55
NSFL1C-209ENST00000489203 KTN1Q86UP2 1357 aaKnown RBP30.94■■■□□ 2.54
NSFL1C-209ENST00000489203 SLIT3O75094 1523 aa30.94■■■□□ 2.54
NSFL1C-209ENST00000489203 PIK3C2AO00443 1686 aa30.93■■■□□ 2.54
NSFL1C-209ENST00000489203 SPATA31A1Q5TZJ5 1347 aa30.93■■■□□ 2.54
NSFL1C-209ENST00000489203 KRT27Q7Z3Y8 459 aa30.92■■■□□ 2.54
NSFL1C-209ENST00000489203 CAMTA1Q9Y6Y1 1673 aa30.91■■■□□ 2.54
NSFL1C-209ENST00000489203 EVA1CP58658 441 aa30.91■■■□□ 2.54
NSFL1C-209ENST00000489203 LMO7Q8WWI1 1683 aa30.9■■■□□ 2.54
NSFL1C-209ENST00000489203 CD163L1Q9NR16 1453 aa30.9■■■□□ 2.54
NSFL1C-209ENST00000489203 SLC12A5Q9H2X9 1139 aa30.9■■■□□ 2.54
NSFL1C-209ENST00000489203 STRN4Q9NRL3 753 aa30.9■■■□□ 2.54
NSFL1C-209ENST00000489203 TMC1Q8TDI8 760 aa30.89■■■□□ 2.54
NSFL1C-209ENST00000489203 AATKQ6ZMQ8 1374 aa30.88■■■□□ 2.53
NSFL1C-209ENST00000489203 MON2Q7Z3U7 1717 aa30.87■■■□□ 2.53
NSFL1C-209ENST00000489203 HDGFL2Q7Z4V5 671 aaPredicted RBP30.87■■■□□ 2.53
NSFL1C-209ENST00000489203 KCNH5Q8NCM2 988 aa30.87■■■□□ 2.53
NSFL1C-209ENST00000489203 TERF2IPQ9NYB0 399 aa30.86■■■□□ 2.53
NSFL1C-209ENST00000489203 USP47Q96K76 1375 aa30.85■■■□□ 2.53
NSFL1C-209ENST00000489203 A0A0G2JS52 829 aa30.85■■■□□ 2.53
NSFL1C-209ENST00000489203 MYT1Q01538 1121 aa30.85■■■□□ 2.53
NSFL1C-209ENST00000489203 USP31Q70CQ4 1352 aa30.84■■■□□ 2.53
NSFL1C-209ENST00000489203 NINLQ9Y2I6 1382 aa30.84■■■□□ 2.53
NSFL1C-209ENST00000489203 LARP1Q6PKG0 1096 aaKnown RBP30.84■■■□□ 2.53
NSFL1C-209ENST00000489203 BARGINQ6ZT62 677 aa30.84■■■□□ 2.53
NSFL1C-209ENST00000489203 THSD7AQ9UPZ6 1657 aa30.84■■■□□ 2.53
NSFL1C-209ENST00000489203 BLMP54132 1417 aaPredicted RBP30.83■■■□□ 2.53
NSFL1C-209ENST00000489203 ARHGEF25Q86VW2 580 aa30.83■■■□□ 2.53
NSFL1C-209ENST00000489203 COL5A2P05997 1499 aaPredicted RBP30.82■■■□□ 2.52
NSFL1C-209ENST00000489203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.8■■■□□ 2.52
NSFL1C-209ENST00000489203 THRAP3Q9Y2W1 955 aaKnown RBP30.8■■■□□ 2.52
NSFL1C-209ENST00000489203 EDC4Q6P2E9 1401 aaKnown RBP30.8■■■□□ 2.52
NSFL1C-209ENST00000489203 A0A1W2PP64 1363 aa30.79■■■□□ 2.52
NSFL1C-209ENST00000489203 TMF1P82094 1093 aa30.79■■■□□ 2.52
NSFL1C-209ENST00000489203 TCP11L2Q8N4U5 519 aa30.79■■■□□ 2.52
NSFL1C-209ENST00000489203 COL18A1P39060 1754 aa30.79■■■□□ 2.52
NSFL1C-209ENST00000489203 USP35Q9P2H5 1018 aa30.77■■■□□ 2.52
NSFL1C-209ENST00000489203 ZBTB7CA1YPR0 619 aa30.76■■■□□ 2.51
NSFL1C-209ENST00000489203 NME9Q86XW9 330 aa30.76■■■□□ 2.51
NSFL1C-209ENST00000489203 CCER1Q8TC90 406 aaPredicted RBP30.76■■■□□ 2.51
NSFL1C-209ENST00000489203 ZRANB1Q9UGI0 708 aa30.76■■■□□ 2.51
NSFL1C-209ENST00000489203 AXIN2Q9Y2T1 843 aa30.76■■■□□ 2.51
NSFL1C-209ENST00000489203 USP54Q70EL1 1684 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms