RNA–Protein interactions for RNA: ENST00000489203.2

NSFL1C-209, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-209ENST00000489203 NISCHQ9Y2I1 1504 aa54.07■■■■■ 6.25
NSFL1C-209ENST00000489203 CCDC180Q9P1Z9 1646 aa48.22■■■■■ 5.31
NSFL1C-209ENST00000489203 ABCC9O60706 1549 aa47.61■■■■■ 5.21
NSFL1C-209ENST00000489203 RB1CC1Q8TDY2 1594 aa45.62■■■■■ 4.89
NSFL1C-209ENST00000489203 NACADO15069 1562 aa45.5■■■■■ 4.87
NSFL1C-209ENST00000489203 DCAF8L2P0C7V8 631 aa45.31■■■■■ 4.84
NSFL1C-209ENST00000489203 MYO15BQ96JP2 1530 aa45.14■■■■■ 4.82
NSFL1C-209ENST00000489203 ZCCHC6Q5VYS8 1495 aaKnown RBP44.91■■■■■ 4.78
NSFL1C-209ENST00000489203 DCAF1Q9Y4B6 1507 aa44.76■■■■■ 4.76
NSFL1C-209ENST00000489203 UNC13AQ9UPW8 1703 aa44.52■■■■■ 4.72
NSFL1C-209ENST00000489203 PABPN1Q86U42 306 aaKnown RBP eCLIP44.44■■■■■ 4.7
NSFL1C-209ENST00000489203 BICRAQ9NZM4 1560 aa44.27■■■■■ 4.68
NSFL1C-209ENST00000489203 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
NSFL1C-209ENST00000489203 SCRIBQ14160 1630 aa43.89■■■■■ 4.62
NSFL1C-209ENST00000489203 SHROOM4Q9ULL8 1493 aa43.82■■■■■ 4.6
NSFL1C-209ENST00000489203 EIF4G1Q04637 1599 aaKnown RBP43.12■■■■■ 4.49
NSFL1C-209ENST00000489203 CC2D2AQ9P2K1 1620 aa43.06■■■■■ 4.48
NSFL1C-209ENST00000489203 CECR2Q9BXF3 1484 aa42.87■■■■■ 4.45
NSFL1C-209ENST00000489203 NCAPD3P42695 1498 aa42.04■■■■■ 4.32
NSFL1C-209ENST00000489203 SMARCA4P51532 1647 aa42■■■■■ 4.31
NSFL1C-209ENST00000489203 ATAD2BQ9ULI0 1458 aa41.95■■■■■ 4.31
NSFL1C-209ENST00000489203 BAZ1AQ9NRL2 1556 aaPredicted RBP41.91■■■■■ 4.3
NSFL1C-209ENST00000489203 SMARCA2P51531 1590 aa41.85■■■■■ 4.29
NSFL1C-209ENST00000489203 HMGXB3Q12766 1538 aa41.72■■■■■ 4.27
NSFL1C-209ENST00000489203 PEG3Q9GZU2 1588 aa41.66■■■■■ 4.26
NSFL1C-209ENST00000489203 MROH2BQ7Z745 1585 aa41.63■■■■■ 4.25
NSFL1C-209ENST00000489203 BAZ1BQ9UIG0 1483 aaKnown RBP41.53■■■■■ 4.24
NSFL1C-209ENST00000489203 WIZO95785 1651 aa41.11■■■■■ 4.17
NSFL1C-209ENST00000489203 NESP48681 1621 aa41.07■■■■■ 4.16
NSFL1C-209ENST00000489203 ERCC6Q03468 1493 aa41.06■■■■■ 4.16
NSFL1C-209ENST00000489203 RSF1Q96T23 1441 aaPredicted RBP41.02■■■■■ 4.16
NSFL1C-209ENST00000489203 LAMC3Q9Y6N6 1575 aa40.93■■■■■ 4.14
NSFL1C-209ENST00000489203 CUX2O14529 1486 aa40.86■■■■■ 4.13
NSFL1C-209ENST00000489203 CADPSQ9ULU8 1353 aa40.77■■■■■ 4.12
NSFL1C-209ENST00000489203 PDS5BQ9NTI5 1447 aa40.71■■■■■ 4.11
NSFL1C-209ENST00000489203 TOP2AP11388 1531 aaKnown RBP40.68■■■■■ 4.1
NSFL1C-209ENST00000489203 THOC2Q8NI27 1593 aaKnown RBP40.53■■■■■ 4.08
NSFL1C-209ENST00000489203 KIF21AQ7Z4S6 1674 aa40.52■■■■■ 4.08
NSFL1C-209ENST00000489203 DNAJC5Q9H3Z4 198 aa40.42■■■■■ 4.06
NSFL1C-209ENST00000489203 CFTRP13569 1480 aa40.42■■■■■ 4.06
NSFL1C-209ENST00000489203 MRC2Q9UBG0 1479 aa40.27■■■■■ 4.04
NSFL1C-209ENST00000489203 CCDC88BA6NC98 1476 aa40.25■■■■■ 4.03
NSFL1C-209ENST00000489203 FANCD2Q9BXW9 1451 aa40.25■■■■■ 4.03
NSFL1C-209ENST00000489203 CEP164Q9UPV0 1460 aa40.22■■■■■ 4.03
NSFL1C-209ENST00000489203 WDR62O43379 1518 aa40.16■■■■■ 4.02
NSFL1C-209ENST00000489203 PRDM2Q13029 1718 aa39.96■■■■□ 3.99
NSFL1C-209ENST00000489203 URB2Q14146 1524 aaKnown RBP39.86■■■■□ 3.97
NSFL1C-209ENST00000489203 ABCC8Q09428 1581 aa39.59■■■■□ 3.93
NSFL1C-209ENST00000489203 SUPT5HO00267 1087 aaKnown RBP39.58■■■■□ 3.93
NSFL1C-209ENST00000489203 TOPBP1Q92547 1522 aa39.55■■■■□ 3.92
NSFL1C-209ENST00000489203 DNMBPQ6XZF7 1577 aa39.45■■■■□ 3.91
NSFL1C-209ENST00000489203 IFT140Q96RY7 1462 aa39.43■■■■□ 3.9
NSFL1C-209ENST00000489203 ZNF608Q9ULD9 1512 aaPredicted RBP39.27■■■■□ 3.88
NSFL1C-209ENST00000489203 POLA1P09884 1462 aaPredicted RBP39.19■■■■□ 3.86
NSFL1C-209ENST00000489203 TARBP1Q13395 1621 aaKnown RBP39.15■■■■□ 3.86
NSFL1C-209ENST00000489203 OSCARQ8IYS5 282 aa39.13■■■■□ 3.85
NSFL1C-209ENST00000489203 CUX1P39880 1505 aa39.08■■■■□ 3.85
NSFL1C-209ENST00000489203 SOGA1O94964 1423 aa39.05■■■■□ 3.84
NSFL1C-209ENST00000489203 EIF4G3O43432 1585 aaKnown RBP39.04■■■■□ 3.84
NSFL1C-209ENST00000489203 AQRO60306 1485 aaKnown RBP eCLIP39.01■■■■□ 3.842e-7■■□□□ 12.8
NSFL1C-209ENST00000489203 RAD54L2Q9Y4B4 1467 aa39.01■■■■□ 3.84
NSFL1C-209ENST00000489203 FGD5Q6ZNL6 1462 aa39■■■■□ 3.83
NSFL1C-209ENST00000489203 TDRD9Q8NDG6 1382 aaKnown RBP38.86■■■■□ 3.81
NSFL1C-209ENST00000489203 WDR97A6NE52 1622 aa38.85■■■■□ 3.81
NSFL1C-209ENST00000489203 TRIM41Q8WV44 630 aa38.79■■■■□ 3.8
NSFL1C-209ENST00000489203 WRNQ14191 1432 aaPredicted RBP eCLIP38.67■■■■□ 3.78
NSFL1C-209ENST00000489203 ABCA10Q8WWZ4 1543 aa38.65■■■■□ 3.78
NSFL1C-209ENST00000489203 GRIN2BQ13224 1484 aa38.63■■■■□ 3.77
NSFL1C-209ENST00000489203 CHD1O14646 1710 aa38.62■■■■□ 3.77
NSFL1C-209ENST00000489203 TOP2BQ02880 1626 aa38.62■■■■□ 3.77
NSFL1C-209ENST00000489203 BIVM-ERCC5R4GMW8 1640 aa38.6■■■■□ 3.77
NSFL1C-209ENST00000489203 FBLN2P98095 1184 aa38.6■■■■□ 3.77
NSFL1C-209ENST00000489203 SNAPC4Q5SXM2 1469 aa38.6■■■■□ 3.77
NSFL1C-209ENST00000489203 MAGI1Q96QZ7 1491 aaPredicted RBP38.58■■■■□ 3.77
NSFL1C-209ENST00000489203 GAPVD1Q14C86 1478 aa38.57■■■■□ 3.76
NSFL1C-209ENST00000489203 SYNJ1O43426 1573 aa38.55■■■■□ 3.76
NSFL1C-209ENST00000489203 ABCA5Q8WWZ7 1642 aa38.49■■■■□ 3.75
NSFL1C-209ENST00000489203 CHMP7Q8WUX9 453 aaPredicted RBP38.48■■■■□ 3.75
NSFL1C-209ENST00000489203 RIMBP3CA6NJZ7 1639 aa38.45■■■■□ 3.75
NSFL1C-209ENST00000489203 RIMBP3BA6NNM3 1639 aa38.45■■■■□ 3.75
NSFL1C-209ENST00000489203 RIMBP3Q9UFD9 1639 aa38.45■■■■□ 3.75
NSFL1C-209ENST00000489203 SYNJ2O15056 1496 aa38.43■■■■□ 3.74
NSFL1C-209ENST00000489203 PBRM1Q86U86 1689 aa38.43■■■■□ 3.74
NSFL1C-209ENST00000489203 ARHGEF11O15085 1522 aa38.42■■■■□ 3.74
NSFL1C-209ENST00000489203 CLASP1Q7Z460 1538 aa38.27■■■■□ 3.72
NSFL1C-209ENST00000489203 ERICH3Q5RHP9 1530 aa38.17■■■■□ 3.7
NSFL1C-209ENST00000489203 ADAMTS12P58397 1594 aa38.14■■■■□ 3.7
NSFL1C-209ENST00000489203 CYB5RLQ6IPT4 315 aa38.13■■■■□ 3.69
NSFL1C-209ENST00000489203 FHAD1B1AJZ9 1412 aa38.12■■■■□ 3.69
NSFL1C-209ENST00000489203 GRIN2AQ12879 1464 aa38.11■■■■□ 3.69
NSFL1C-209ENST00000489203 ARAP1Q96P48 1450 aa38.08■■■■□ 3.69
NSFL1C-209ENST00000489203 NUP160Q12769 1436 aa38.01■■■■□ 3.68
NSFL1C-209ENST00000489203 CEP170Q5SW79 1584 aa37.91■■■■□ 3.66
NSFL1C-209ENST00000489203 KIF27Q86VH2 1401 aa37.91■■■■□ 3.66
NSFL1C-209ENST00000489203 IGF1RP08069 1367 aa37.87■■■■□ 3.65
NSFL1C-209ENST00000489203 SHROOM2Q13796 1616 aa37.73■■■■□ 3.63
NSFL1C-209ENST00000489203 CUL7Q14999 1698 aa37.69■■■■□ 3.62
NSFL1C-209ENST00000489203 ERCC6L2Q5T890 1561 aa37.67■■■■□ 3.62
NSFL1C-209ENST00000489203 JPH4Q96JJ6 628 aa37.65■■■■□ 3.62
NSFL1C-209ENST00000489203 CARMIL1Q5VZK9 1371 aa37.6■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms