RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 POLR3AO14802 1390 aaPredicted RBP9.33□□□□□ -0.92
PDAP1-203ENST00000488214 MSH6P52701 1360 aa9.33□□□□□ -0.92
PDAP1-203ENST00000488214 LTN1O94822 1766 aa9.32□□□□□ -0.92
PDAP1-203ENST00000488214 MST1RQ04912 1400 aa9.32□□□□□ -0.92
PDAP1-203ENST00000488214 NCOA3Q9Y6Q9 1424 aa9.32□□□□□ -0.92
PDAP1-203ENST00000488214 NGDNQ8NEJ9 315 aaKnown RBP9.32□□□□□ -0.92
PDAP1-203ENST00000488214 C1orf167Q5SNV9 1468 aa9.32□□□□□ -0.92
PDAP1-203ENST00000488214 OVOS2A0A0J9YW53 1432 aa9.31□□□□□ -0.92
PDAP1-203ENST00000488214 OVOS2Q6IE36 1432 aa9.31□□□□□ -0.92
PDAP1-203ENST00000488214 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
PDAP1-203ENST00000488214 NME9Q86XW9 330 aa9.31□□□□□ -0.92
PDAP1-203ENST00000488214 BLMP54132 1417 aaPredicted RBP9.31□□□□□ -0.92
PDAP1-203ENST00000488214 ALS2Q96Q42 1657 aa9.3□□□□□ -0.92
PDAP1-203ENST00000488214 COL3A1P02461 1466 aaPredicted RBP9.3□□□□□ -0.92
PDAP1-203ENST00000488214 FYB1O15117 783 aa9.3□□□□□ -0.92
PDAP1-203ENST00000488214 HNRNPUQ00839 825 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDAP1-203ENST00000488214 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
PDAP1-203ENST00000488214 PHF8Q9UPP1 1060 aa9.3□□□□□ -0.92
PDAP1-203ENST00000488214 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
PDAP1-203ENST00000488214 SSH2Q76I76 1423 aa9.3□□□□□ -0.92
PDAP1-203ENST00000488214 TTC21BQ7Z4L5 1316 aa9.3□□□□□ -0.92
PDAP1-203ENST00000488214 CDK12Q9NYV4 1490 aaPredicted RBP9.29□□□□□ -0.92
PDAP1-203ENST00000488214 ATF3P18847 181 aa9.29□□□□□ -0.92
PDAP1-203ENST00000488214 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
PDAP1-203ENST00000488214 C19orf44Q9H6X5 657 aa9.29□□□□□ -0.92
PDAP1-203ENST00000488214 SMG6Q86US8 1419 aaKnown RBP9.29□□□□□ -0.92
PDAP1-203ENST00000488214 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
PDAP1-203ENST00000488214 PHRF1Q9P1Y6 1649 aaKnown RBP9.28□□□□□ -0.92
PDAP1-203ENST00000488214 WDR43Q15061 677 aaKnown RBP eCLIP9.28□□□□□ -0.92
PDAP1-203ENST00000488214 PNISRQ8TF01 805 aaKnown RBP9.28□□□□□ -0.92
PDAP1-203ENST00000488214 COG3Q96JB2 828 aa9.28□□□□□ -0.92
PDAP1-203ENST00000488214 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
PDAP1-203ENST00000488214 DMRT2Q9Y5R5 561 aa9.28□□□□□ -0.92
PDAP1-203ENST00000488214 TTC21AQ8NDW8 1320 aa9.28□□□□□ -0.92
PDAP1-203ENST00000488214 LTBP4Q8N2S1 1624 aa9.27□□□□□ -0.92
PDAP1-203ENST00000488214 CFAP53Q96M91 514 aa9.27□□□□□ -0.93
PDAP1-203ENST00000488214 ABCA3Q99758 1704 aa9.27□□□□□ -0.93
PDAP1-203ENST00000488214 CRYBG1Q9Y4K1 1723 aa9.27□□□□□ -0.93
PDAP1-203ENST00000488214 CADPS2Q86UW7 1296 aa9.26□□□□□ -0.93
PDAP1-203ENST00000488214 ORAI2Q96SN7 254 aa9.26□□□□□ -0.93
PDAP1-203ENST00000488214 SCAF1Q9H7N4 1312 aaKnown RBP9.26□□□□□ -0.93
PDAP1-203ENST00000488214 PAK3O75914 559 aaPredicted RBP9.25□□□□□ -0.93
PDAP1-203ENST00000488214 MTHFSP49914 203 aa9.25□□□□□ -0.93
PDAP1-203ENST00000488214 ROBO1Q9Y6N7 1651 aa9.25□□□□□ -0.93
PDAP1-203ENST00000488214 SLIT3O75094 1523 aa9.25□□□□□ -0.93
PDAP1-203ENST00000488214 NFAT5O94916 1531 aa9.25□□□□□ -0.93
PDAP1-203ENST00000488214 INSRP06213 1382 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 USP31Q70CQ4 1352 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 PXDNQ92626 1479 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 SOX12O15370 315 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
PDAP1-203ENST00000488214 RGPD1P0DJD0 1748 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 ZBED9Q6R2W3 1325 aa9.24□□□□□ -0.93
PDAP1-203ENST00000488214 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
PDAP1-203ENST00000488214 PPM1GO15355 546 aaPredicted RBP9.23□□□□□ -0.93
PDAP1-203ENST00000488214 PSME1Q06323 249 aa9.23□□□□□ -0.93
PDAP1-203ENST00000488214 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
PDAP1-203ENST00000488214 EMILIN1Q9Y6C2 1016 aa9.23□□□□□ -0.93
PDAP1-203ENST00000488214 TNS3Q68CZ2 1445 aa9.22□□□□□ -0.93
PDAP1-203ENST00000488214 IQSEC2Q5JU85 1478 aa9.22□□□□□ -0.93
PDAP1-203ENST00000488214 FOXO3O43524 673 aa9.22□□□□□ -0.93
PDAP1-203ENST00000488214 FBLN1P23142 703 aa9.22□□□□□ -0.93
PDAP1-203ENST00000488214 RRS1Q15050 365 aaKnown RBP9.22□□□□□ -0.93
PDAP1-203ENST00000488214 RGPD5Q99666 1765 aa9.22□□□□□ -0.93
PDAP1-203ENST00000488214 NLRP6P59044 892 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 CCDC146Q8IYE0 955 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 ABTB2Q8N961 1025 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 POLKQ9UBT6 870 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 ADAMTS8Q9UP79 889 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 NPHP3Q7Z494 1330 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 RGPD2P0DJD1 1756 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 PNPLA6Q8IY17 1366 aa9.21□□□□□ -0.94
PDAP1-203ENST00000488214 PHLPP1O60346 1717 aa9.2□□□□□ -0.94
PDAP1-203ENST00000488214 U2SURPO15042 1029 aaKnown RBP9.2□□□□□ -0.94
PDAP1-203ENST00000488214 LMOD2Q6P5Q4 547 aa9.2□□□□□ -0.94
PDAP1-203ENST00000488214 KRT28Q7Z3Y7 464 aa9.2□□□□□ -0.94
PDAP1-203ENST00000488214 DLG5Q8TDM6 1919 aa9.2□□□□□ -0.94
PDAP1-203ENST00000488214 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
PDAP1-203ENST00000488214 FLT4P35916 1363 aa9.2□□□□□ -0.94
PDAP1-203ENST00000488214 AHDC1Q5TGY3 1603 aaPredicted RBP9.2□□□□□ -0.94
PDAP1-203ENST00000488214 DIAPH1O60610 1272 aaKnown RBP9.19□□□□□ -0.94
PDAP1-203ENST00000488214 PLEKHG5O94827 1062 aa9.19□□□□□ -0.94
PDAP1-203ENST00000488214 BRINP3Q76B58 766 aa9.19□□□□□ -0.94
PDAP1-203ENST00000488214 DDX17Q92841 729 aaKnown RBP9.19□□□□□ -0.94
PDAP1-203ENST00000488214 NUDCQ9Y266 331 aa9.19□□□□□ -0.94
PDAP1-203ENST00000488214 MAP3K19Q56UN5 1328 aa9.19□□□□□ -0.94
PDAP1-203ENST00000488214 RTL1A6NKG5 1358 aa9.19□□□□□ -0.94
PDAP1-203ENST00000488214 FAM208AQ9UK61 1670 aaKnown RBP9.19□□□□□ -0.94
PDAP1-203ENST00000488214 U2AF1L5P0DN76 240 aaPredicted RBP9.18□□□□□ -0.94
PDAP1-203ENST00000488214 U2AF1Q01081 240 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDAP1-203ENST00000488214 SALL2Q9Y467 1007 aaPredicted RBP9.18□□□□□ -0.94
PDAP1-203ENST00000488214 CAMTA1Q9Y6Y1 1673 aa9.17□□□□□ -0.94
PDAP1-203ENST00000488214 ARHGEF10O15013 1369 aa9.17□□□□□ -0.94
PDAP1-203ENST00000488214 USP19O94966 1318 aa9.17□□□□□ -0.94
PDAP1-203ENST00000488214 ZBTB7CA1YPR0 619 aa9.17□□□□□ -0.94
PDAP1-203ENST00000488214 AMPHP49418 695 aa9.17□□□□□ -0.94
PDAP1-203ENST00000488214 SLAIN2Q9P270 581 aa9.17□□□□□ -0.94
PDAP1-203ENST00000488214 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms