RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 ABCA3Q99758 1704 aa33.09■■■□□ 2.89
STRADB-209ENST00000488196 RXRBP28702 533 aa33.07■■■□□ 2.88
STRADB-209ENST00000488196 TIMELESSQ9UNS1 1208 aa33.07■■■□□ 2.88
STRADB-209ENST00000488196 SBNO2Q9Y2G9 1366 aa33.06■■■□□ 2.88
STRADB-209ENST00000488196 NUTM2GQ5VZR2 741 aa33.02■■■□□ 2.88
STRADB-209ENST00000488196 BCL9LQ86UU0 1499 aa33.01■■■□□ 2.88
STRADB-209ENST00000488196 ST20-MTHFSA0A0A6YYL1 179 aa33■■■□□ 2.87
STRADB-209ENST00000488196 TRPC5Q9UL62 973 aaPredicted RBP32.99■■■□□ 2.87
STRADB-209ENST00000488196 RBM6P78332 1123 aaKnown RBP32.98■■■□□ 2.87
STRADB-209ENST00000488196 CRYBG1Q9Y4K1 1723 aa32.98■■■□□ 2.87
STRADB-209ENST00000488196 ATAD2Q6PL18 1390 aa32.97■■■□□ 2.87
STRADB-209ENST00000488196 SLIT2O94813 1529 aa32.97■■■□□ 2.87
STRADB-209ENST00000488196 ATRNO75882 1429 aa32.96■■■□□ 2.87
STRADB-209ENST00000488196 ABTB2Q8N961 1025 aa32.96■■■□□ 2.87
STRADB-209ENST00000488196 FAM83GA6ND36 823 aa32.95■■■□□ 2.87
STRADB-209ENST00000488196 TESK2Q96S53 571 aa32.95■■■□□ 2.87
STRADB-209ENST00000488196 USP6P35125 1406 aa32.94■■■□□ 2.86
STRADB-209ENST00000488196 UNC5CLQ8IV45 518 aa32.93■■■□□ 2.86
STRADB-209ENST00000488196 USP47Q96K76 1375 aa32.93■■■□□ 2.86
STRADB-209ENST00000488196 PLCH1Q4KWH8 1693 aa32.91■■■□□ 2.86
STRADB-209ENST00000488196 CDK12Q9NYV4 1490 aaPredicted RBP32.91■■■□□ 2.86
STRADB-209ENST00000488196 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.9■■■□□ 2.86
STRADB-209ENST00000488196 AKAP12Q02952 1782 aa32.89■■■□□ 2.86
STRADB-209ENST00000488196 PHRF1Q9P1Y6 1649 aaKnown RBP32.89■■■□□ 2.86
STRADB-209ENST00000488196 BRD4O60885 1362 aaPredicted RBP32.89■■■□□ 2.86
STRADB-209ENST00000488196 RGS12O14924 1447 aa32.88■■■□□ 2.85
STRADB-209ENST00000488196 SSH2Q76I76 1423 aa32.87■■■□□ 2.85
STRADB-209ENST00000488196 TMC1Q8TDI8 760 aa32.87■■■□□ 2.85
STRADB-209ENST00000488196 ZNF692Q9BU19 519 aaPredicted RBP32.87■■■□□ 2.85
STRADB-209ENST00000488196 NWD2Q9ULI1 1742 aa32.86■■■□□ 2.85
STRADB-209ENST00000488196 CPSF1Q10570 1443 aaKnown RBP32.85■■■□□ 2.85
STRADB-209ENST00000488196 NLRP13Q86W25 1043 aa32.85■■■□□ 2.85
STRADB-209ENST00000488196 GJD4Q96KN9 370 aaPredicted RBP32.85■■■□□ 2.85
STRADB-209ENST00000488196 PRDM11Q9NQV5 511 aa32.85■■■□□ 2.85
STRADB-209ENST00000488196 COL14A1Q05707 1796 aaKnown RBP32.84■■■□□ 2.85
STRADB-209ENST00000488196 ZC3H6P61129 1189 aaKnown RBP32.84■■■□□ 2.85
STRADB-209ENST00000488196 SLC12A5Q9H2X9 1139 aa32.84■■■□□ 2.85
STRADB-209ENST00000488196 KIAA0232Q92628 1395 aa32.83■■■□□ 2.85
STRADB-209ENST00000488196 USP19O94966 1318 aa32.83■■■□□ 2.85
STRADB-209ENST00000488196 BTG4Q9NY30 223 aa32.83■■■□□ 2.85
STRADB-209ENST00000488196 KTN1Q86UP2 1357 aaKnown RBP32.83■■■□□ 2.85
STRADB-209ENST00000488196 TTC21BQ7Z4L5 1316 aa32.82■■■□□ 2.84
STRADB-209ENST00000488196 NLRP6P59044 892 aa32.82■■■□□ 2.84
STRADB-209ENST00000488196 PUS7Q96PZ0 661 aaKnown RBP32.82■■■□□ 2.84
STRADB-209ENST00000488196 CHRNA2Q15822 529 aa32.81■■■□□ 2.84
STRADB-209ENST00000488196 PIK3C2AO00443 1686 aa32.8■■■□□ 2.84
STRADB-209ENST00000488196 CD163L1Q9NR16 1453 aa32.8■■■□□ 2.84
STRADB-209ENST00000488196 NRKQ7Z2Y5 1582 aa32.79■■■□□ 2.84
STRADB-209ENST00000488196 SLC24A1O60721 1099 aa32.79■■■□□ 2.84
STRADB-209ENST00000488196 VPS72Q15906 364 aa32.79■■■□□ 2.84
STRADB-209ENST00000488196 NRAPQ86VF7 1730 aa32.79■■■□□ 2.84
STRADB-209ENST00000488196 GLI3P10071 1580 aa32.79■■■□□ 2.84
STRADB-209ENST00000488196 MON2Q7Z3U7 1717 aa32.78■■■□□ 2.84
STRADB-209ENST00000488196 GCP02774 474 aa32.77■■■□□ 2.84
STRADB-209ENST00000488196 CCDC9Q9Y3X0 531 aaKnown RBP32.77■■■□□ 2.84
STRADB-209ENST00000488196 TMF1P82094 1093 aa32.76■■■□□ 2.83
STRADB-209ENST00000488196 HDGFL2Q7Z4V5 671 aaPredicted RBP32.75■■■□□ 2.83
STRADB-209ENST00000488196 TTC21AQ8NDW8 1320 aa32.75■■■□□ 2.83
STRADB-209ENST00000488196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.74■■■□□ 2.83
STRADB-209ENST00000488196 TERF2IPQ9NYB0 399 aa32.71■■■□□ 2.83
STRADB-209ENST00000488196 SLIT3O75094 1523 aa32.71■■■□□ 2.83
STRADB-209ENST00000488196 A0A1W2PP64 1363 aa32.7■■■□□ 2.83
STRADB-209ENST00000488196 CPDO75976 1380 aa32.7■■■□□ 2.83
STRADB-209ENST00000488196 ZRANB1Q9UGI0 708 aa32.69■■■□□ 2.82
STRADB-209ENST00000488196 ZBTB7CA1YPR0 619 aa32.68■■■□□ 2.82
STRADB-209ENST00000488196 NME9Q86XW9 330 aa32.67■■■□□ 2.82
STRADB-209ENST00000488196 STRN4Q9NRL3 753 aa32.67■■■□□ 2.82
STRADB-209ENST00000488196 NINLQ9Y2I6 1382 aa32.67■■■□□ 2.82
STRADB-209ENST00000488196 UPF1Q92900 1129 aaKnown RBP eCLIP32.66■■■□□ 2.82
STRADB-209ENST00000488196 SOX12O15370 315 aa32.65■■■□□ 2.82
STRADB-209ENST00000488196 EDC4Q6P2E9 1401 aaKnown RBP32.65■■■□□ 2.82
STRADB-209ENST00000488196 CAMTA1Q9Y6Y1 1673 aa32.65■■■□□ 2.82
STRADB-209ENST00000488196 LMO7Q8WWI1 1683 aa32.63■■■□□ 2.81
STRADB-209ENST00000488196 SPATA31A5Q5VU36 1347 aa32.63■■■□□ 2.81
STRADB-209ENST00000488196 SPATA31A7Q8IWB4 1347 aa32.63■■■□□ 2.81
STRADB-209ENST00000488196 SEPT12Q8IYM1 358 aa32.63■■■□□ 2.81
STRADB-209ENST00000488196 CDCA8Q53HL2 280 aa32.62■■■□□ 2.81
STRADB-209ENST00000488196 EVA1CP58658 441 aa32.61■■■□□ 2.81
STRADB-209ENST00000488196 FAM98CQ17RN3 349 aaKnown RBP32.61■■■□□ 2.81
STRADB-209ENST00000488196 BRWD3Q6RI45 1802 aa32.61■■■□□ 2.81
STRADB-209ENST00000488196 ONECUT3O60422 494 aaPredicted RBP32.6■■■□□ 2.81
STRADB-209ENST00000488196 HSPA5P11021 654 aaKnown RBP32.6■■■□□ 2.81
STRADB-209ENST00000488196 EIF4G2P78344 907 aaKnown RBP eCLIP32.6■■■□□ 2.81
STRADB-209ENST00000488196 USP31Q70CQ4 1352 aa32.59■■■□□ 2.81
STRADB-209ENST00000488196 KCNH5Q8NCM2 988 aa32.59■■■□□ 2.81
STRADB-209ENST00000488196 ANKRD36BQ8N2N9 1353 aa32.58■■■□□ 2.81
STRADB-209ENST00000488196 AATKQ6ZMQ8 1374 aa32.57■■■□□ 2.8
STRADB-209ENST00000488196 A0A0G2JS52 829 aa32.56■■■□□ 2.8
STRADB-209ENST00000488196 MYT1Q01538 1121 aa32.56■■■□□ 2.8
STRADB-209ENST00000488196 LARP1Q6PKG0 1096 aaKnown RBP32.56■■■□□ 2.8
STRADB-209ENST00000488196 ARHGEF25Q86VW2 580 aa32.56■■■□□ 2.8
STRADB-209ENST00000488196 SPATA31A1Q5TZJ5 1347 aa32.55■■■□□ 2.8
STRADB-209ENST00000488196 USP54Q70EL1 1684 aa32.55■■■□□ 2.8
STRADB-209ENST00000488196 NFAT5O94916 1531 aa32.55■■■□□ 2.8
STRADB-209ENST00000488196 COL18A1P39060 1754 aa32.55■■■□□ 2.8
STRADB-209ENST00000488196 USP35Q9P2H5 1018 aa32.54■■■□□ 2.8
STRADB-209ENST00000488196 COL5A2P05997 1499 aaPredicted RBP32.53■■■□□ 2.8
STRADB-209ENST00000488196 AXIN2Q9Y2T1 843 aa32.52■■■□□ 2.8
STRADB-209ENST00000488196 MYOM1P52179 1685 aa32.51■■■□□ 2.79
STRADB-209ENST00000488196 POLR3GLQ9BT43 218 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms