RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 TIMELESSQ9UNS1 1208 aa33.53■■■□□ 2.96
RHBDD3-205ENST00000488106 PLEKHG3A1L390 1219 aa33.52■■■□□ 2.96
RHBDD3-205ENST00000488106 HAP1P54257 671 aaPredicted RBP33.52■■■□□ 2.96
RHBDD3-205ENST00000488106 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.5■■■□□ 2.95
RHBDD3-205ENST00000488106 MON2Q7Z3U7 1717 aa33.47■■■□□ 2.95
RHBDD3-205ENST00000488106 NWD2Q9ULI1 1742 aa33.47■■■□□ 2.95
RHBDD3-205ENST00000488106 CABP1Q9NZU7 370 aa33.46■■■□□ 2.95
RHBDD3-205ENST00000488106 ATAD2Q6PL18 1390 aa33.45■■■□□ 2.94
RHBDD3-205ENST00000488106 USP47Q96K76 1375 aa33.45■■■□□ 2.94
RHBDD3-205ENST00000488106 NRKQ7Z2Y5 1582 aa33.43■■■□□ 2.94
RHBDD3-205ENST00000488106 ST20-MTHFSA0A0A6YYL1 179 aa33.42■■■□□ 2.94
RHBDD3-205ENST00000488106 USP21Q9UK80 565 aa33.42■■■□□ 2.94
RHBDD3-205ENST00000488106 USP6P35125 1406 aa33.41■■■□□ 2.94
RHBDD3-205ENST00000488106 PIK3C2AO00443 1686 aa33.41■■■□□ 2.94
RHBDD3-205ENST00000488106 COL14A1Q05707 1796 aaKnown RBP33.4■■■□□ 2.94
RHBDD3-205ENST00000488106 NUTM2GQ5VZR2 741 aa33.39■■■□□ 2.94
RHBDD3-205ENST00000488106 FNBP4Q8N3X1 1017 aaPredicted RBP33.39■■■□□ 2.94
RHBDD3-205ENST00000488106 NRAPQ86VF7 1730 aa33.39■■■□□ 2.94
RHBDD3-205ENST00000488106 SLIT2O94813 1529 aa33.38■■■□□ 2.93
RHBDD3-205ENST00000488106 QTRT2Q9H974 415 aaKnown RBP33.37■■■□□ 2.93
RHBDD3-205ENST00000488106 BCL9LQ86UU0 1499 aa33.37■■■□□ 2.93
RHBDD3-205ENST00000488106 RXRBP28702 533 aa33.36■■■□□ 2.93
RHBDD3-205ENST00000488106 TESK2Q96S53 571 aa33.36■■■□□ 2.93
RHBDD3-205ENST00000488106 ATRNO75882 1429 aa33.34■■■□□ 2.93
RHBDD3-205ENST00000488106 ABTB2Q8N961 1025 aa33.33■■■□□ 2.93
RHBDD3-205ENST00000488106 BRD4O60885 1362 aaPredicted RBP33.33■■■□□ 2.93
RHBDD3-205ENST00000488106 TRPC5Q9UL62 973 aaPredicted RBP33.31■■■□□ 2.92
RHBDD3-205ENST00000488106 CDK12Q9NYV4 1490 aaPredicted RBP33.31■■■□□ 2.92
RHBDD3-205ENST00000488106 CPSF1Q10570 1443 aaKnown RBP33.29■■■□□ 2.92
RHBDD3-205ENST00000488106 SSH2Q76I76 1423 aa33.29■■■□□ 2.92
RHBDD3-205ENST00000488106 RBM6P78332 1123 aaKnown RBP33.29■■■□□ 2.92
RHBDD3-205ENST00000488106 TMC1Q8TDI8 760 aa33.29■■■□□ 2.92
RHBDD3-205ENST00000488106 KTN1Q86UP2 1357 aaKnown RBP33.28■■■□□ 2.92
RHBDD3-205ENST00000488106 CD163L1Q9NR16 1453 aa33.28■■■□□ 2.92
RHBDD3-205ENST00000488106 RGS12O14924 1447 aa33.28■■■□□ 2.92
RHBDD3-205ENST00000488106 GLI3P10071 1580 aa33.26■■■□□ 2.91
RHBDD3-205ENST00000488106 FAM83GA6ND36 823 aa33.25■■■□□ 2.91
RHBDD3-205ENST00000488106 UNC5CLQ8IV45 518 aa33.25■■■□□ 2.91
RHBDD3-205ENST00000488106 ZNF692Q9BU19 519 aaPredicted RBP33.25■■■□□ 2.91
RHBDD3-205ENST00000488106 USP19O94966 1318 aa33.24■■■□□ 2.91
RHBDD3-205ENST00000488106 MYOM1P52179 1685 aa33.23■■■□□ 2.91
RHBDD3-205ENST00000488106 KIAA0232Q92628 1395 aa33.23■■■□□ 2.91
RHBDD3-205ENST00000488106 SLC24A1O60721 1099 aa33.22■■■□□ 2.91
RHBDD3-205ENST00000488106 NLRP13Q86W25 1043 aa33.22■■■□□ 2.91
RHBDD3-205ENST00000488106 SLC12A5Q9H2X9 1139 aa33.22■■■□□ 2.91
RHBDD3-205ENST00000488106 PRDM11Q9NQV5 511 aa33.22■■■□□ 2.91
RHBDD3-205ENST00000488106 USP54Q70EL1 1684 aa33.22■■■□□ 2.91
RHBDD3-205ENST00000488106 SLIT3O75094 1523 aa33.22■■■□□ 2.91
RHBDD3-205ENST00000488106 BRWD3Q6RI45 1802 aa33.21■■■□□ 2.91
RHBDD3-205ENST00000488106 TMF1P82094 1093 aa33.21■■■□□ 2.91
RHBDD3-205ENST00000488106 PUS7Q96PZ0 661 aaKnown RBP33.21■■■□□ 2.91
RHBDD3-205ENST00000488106 TTC21BQ7Z4L5 1316 aa33.21■■■□□ 2.91
RHBDD3-205ENST00000488106 ZC3H6P61129 1189 aaKnown RBP33.2■■■□□ 2.91
RHBDD3-205ENST00000488106 NLRP6P59044 892 aa33.19■■■□□ 2.9
RHBDD3-205ENST00000488106 LMO7Q8WWI1 1683 aa33.19■■■□□ 2.9
RHBDD3-205ENST00000488106 A0A1W2PP64 1363 aa33.19■■■□□ 2.9
RHBDD3-205ENST00000488106 HDGFL2Q7Z4V5 671 aaPredicted RBP33.18■■■□□ 2.9
RHBDD3-205ENST00000488106 BTG4Q9NY30 223 aa33.18■■■□□ 2.9
RHBDD3-205ENST00000488106 NINLQ9Y2I6 1382 aa33.18■■■□□ 2.9
RHBDD3-205ENST00000488106 RGPD5Q99666 1765 aa33.17■■■□□ 2.9
RHBDD3-205ENST00000488106 TTC21AQ8NDW8 1320 aa33.17■■■□□ 2.9
RHBDD3-205ENST00000488106 CHRNA2Q15822 529 aa33.16■■■□□ 2.9
RHBDD3-205ENST00000488106 GJD4Q96KN9 370 aaPredicted RBP33.15■■■□□ 2.9
RHBDD3-205ENST00000488106 LTN1O94822 1766 aa33.14■■■□□ 2.9
RHBDD3-205ENST00000488106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.14■■■□□ 2.9
RHBDD3-205ENST00000488106 TERF2IPQ9NYB0 399 aa33.14■■■□□ 2.9
RHBDD3-205ENST00000488106 CCDC9Q9Y3X0 531 aaKnown RBP33.14■■■□□ 2.9
RHBDD3-205ENST00000488106 EDC4Q6P2E9 1401 aaKnown RBP33.13■■■□□ 2.89
RHBDD3-205ENST00000488106 GCP02774 474 aa33.12■■■□□ 2.89
RHBDD3-205ENST00000488106 KIF20BQ96Q89 1820 aa33.12■■■□□ 2.89
RHBDD3-205ENST00000488106 VPS72Q15906 364 aa33.11■■■□□ 2.89
RHBDD3-205ENST00000488106 CPDO75976 1380 aa33.1■■■□□ 2.89
RHBDD3-205ENST00000488106 COL18A1P39060 1754 aa33.1■■■□□ 2.89
RHBDD3-205ENST00000488106 CAMTA1Q9Y6Y1 1673 aa33.08■■■□□ 2.89
RHBDD3-205ENST00000488106 ZBTB7CA1YPR0 619 aa33.08■■■□□ 2.89
RHBDD3-205ENST00000488106 EIF4G2P78344 907 aaKnown RBP eCLIP33.08■■■□□ 2.89
RHBDD3-205ENST00000488106 NFAT5O94916 1531 aa33.07■■■□□ 2.89
RHBDD3-205ENST00000488106 CDCA8Q53HL2 280 aa33.07■■■□□ 2.88
RHBDD3-205ENST00000488106 EP400Q96L91 3159 aa33.07■■■□□ 2.88
RHBDD3-205ENST00000488106 SOX12O15370 315 aa33.06■■■□□ 2.88
RHBDD3-205ENST00000488106 HSPA5P11021 654 aaKnown RBP33.06■■■□□ 2.88
RHBDD3-205ENST00000488106 NME9Q86XW9 330 aa33.06■■■□□ 2.88
RHBDD3-205ENST00000488106 ANKRD36BQ8N2N9 1353 aa33.06■■■□□ 2.88
RHBDD3-205ENST00000488106 ZRANB1Q9UGI0 708 aa33.05■■■□□ 2.88
RHBDD3-205ENST00000488106 STRN4Q9NRL3 753 aa33.03■■■□□ 2.88
RHBDD3-205ENST00000488106 USP31Q70CQ4 1352 aa33.01■■■□□ 2.88
RHBDD3-205ENST00000488106 COL5A2P05997 1499 aaPredicted RBP32.99■■■□□ 2.87
RHBDD3-205ENST00000488106 THSD7AQ9UPZ6 1657 aa32.98■■■□□ 2.87
RHBDD3-205ENST00000488106 OVOS2A0A0J9YW53 1432 aa32.98■■■□□ 2.87
RHBDD3-205ENST00000488106 OVOS2Q6IE36 1432 aa32.98■■■□□ 2.87
RHBDD3-205ENST00000488106 KCNH5Q8NCM2 988 aa32.98■■■□□ 2.87
RHBDD3-205ENST00000488106 SPATA31A5Q5VU36 1347 aa32.98■■■□□ 2.87
RHBDD3-205ENST00000488106 SPATA31A7Q8IWB4 1347 aa32.98■■■□□ 2.87
RHBDD3-205ENST00000488106 WNK3Q9BYP7 1800 aa32.98■■■□□ 2.87
RHBDD3-205ENST00000488106 POLR3GLQ9BT43 218 aa32.97■■■□□ 2.87
RHBDD3-205ENST00000488106 AATKQ6ZMQ8 1374 aa32.96■■■□□ 2.87
RHBDD3-205ENST00000488106 A0A0G2JS52 829 aa32.95■■■□□ 2.87
RHBDD3-205ENST00000488106 EVA1CP58658 441 aa32.95■■■□□ 2.87
RHBDD3-205ENST00000488106 MYT1Q01538 1121 aa32.95■■■□□ 2.87
RHBDD3-205ENST00000488106 FAM98CQ17RN3 349 aaKnown RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms