RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CABP1Q9NZU7 370 aa31.7■■■□□ 2.67
CDHR3-212ENST00000487084 ABCA3Q99758 1704 aa31.67■■■□□ 2.66
CDHR3-212ENST00000487084 SBNO2Q9Y2G9 1366 aa31.67■■■□□ 2.66
CDHR3-212ENST00000487084 TRPC5Q9UL62 973 aaPredicted RBP31.66■■■□□ 2.66
CDHR3-212ENST00000487084 NUTM2GQ5VZR2 741 aa31.65■■■□□ 2.66
CDHR3-212ENST00000487084 TIMELESSQ9UNS1 1208 aa31.65■■■□□ 2.66
CDHR3-212ENST00000487084 RBM6P78332 1123 aaKnown RBP31.64■■■□□ 2.66
CDHR3-212ENST00000487084 ATAD2Q6PL18 1390 aa31.63■■■□□ 2.65
CDHR3-212ENST00000487084 BCL9LQ86UU0 1499 aa31.62■■■□□ 2.65
CDHR3-212ENST00000487084 ATRNO75882 1429 aa31.6■■■□□ 2.65
CDHR3-212ENST00000487084 ABTB2Q8N961 1025 aa31.6■■■□□ 2.65
CDHR3-212ENST00000487084 SLIT2O94813 1529 aa31.59■■■□□ 2.65
CDHR3-212ENST00000487084 ST20-MTHFSA0A0A6YYL1 179 aa31.59■■■□□ 2.65
CDHR3-212ENST00000487084 UNC5CLQ8IV45 518 aa31.58■■■□□ 2.65
CDHR3-212ENST00000487084 CDK12Q9NYV4 1490 aaPredicted RBP31.58■■■□□ 2.65
CDHR3-212ENST00000487084 USP6P35125 1406 aa31.58■■■□□ 2.65
CDHR3-212ENST00000487084 FAM83GA6ND36 823 aa31.56■■■□□ 2.64
CDHR3-212ENST00000487084 USP47Q96K76 1375 aa31.56■■■□□ 2.64
CDHR3-212ENST00000487084 RGS12O14924 1447 aa31.55■■■□□ 2.64
CDHR3-212ENST00000487084 CRYBG1Q9Y4K1 1723 aa31.54■■■□□ 2.64
CDHR3-212ENST00000487084 BRD4O60885 1362 aaPredicted RBP31.54■■■□□ 2.64
CDHR3-212ENST00000487084 PLCH1Q4KWH8 1693 aa31.53■■■□□ 2.64
CDHR3-212ENST00000487084 TMC1Q8TDI8 760 aa31.52■■■□□ 2.64
CDHR3-212ENST00000487084 TESK2Q96S53 571 aa31.52■■■□□ 2.64
CDHR3-212ENST00000487084 PRDM11Q9NQV5 511 aa31.52■■■□□ 2.64
CDHR3-212ENST00000487084 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.51■■■□□ 2.63
CDHR3-212ENST00000487084 PHRF1Q9P1Y6 1649 aaKnown RBP31.5■■■□□ 2.63
CDHR3-212ENST00000487084 NLRP13Q86W25 1043 aa31.5■■■□□ 2.63
CDHR3-212ENST00000487084 GJD4Q96KN9 370 aaPredicted RBP31.5■■■□□ 2.63
CDHR3-212ENST00000487084 ZNF692Q9BU19 519 aaPredicted RBP31.5■■■□□ 2.63
CDHR3-212ENST00000487084 ZC3H6P61129 1189 aaKnown RBP31.49■■■□□ 2.63
CDHR3-212ENST00000487084 CCDC9Q9Y3X0 531 aaKnown RBP31.49■■■□□ 2.63
CDHR3-212ENST00000487084 KIAA0232Q92628 1395 aa31.48■■■□□ 2.63
CDHR3-212ENST00000487084 BTG4Q9NY30 223 aa31.48■■■□□ 2.63
CDHR3-212ENST00000487084 KTN1Q86UP2 1357 aaKnown RBP31.47■■■□□ 2.63
CDHR3-212ENST00000487084 NWD2Q9ULI1 1742 aa31.46■■■□□ 2.63
CDHR3-212ENST00000487084 COL14A1Q05707 1796 aaKnown RBP31.46■■■□□ 2.63
CDHR3-212ENST00000487084 NLRP6P59044 892 aa31.46■■■□□ 2.63
CDHR3-212ENST00000487084 USP19O94966 1318 aa31.46■■■□□ 2.63
CDHR3-212ENST00000487084 CPSF1Q10570 1443 aaKnown RBP31.45■■■□□ 2.63
CDHR3-212ENST00000487084 CHRNA2Q15822 529 aa31.45■■■□□ 2.63
CDHR3-212ENST00000487084 SSH2Q76I76 1423 aa31.45■■■□□ 2.63
CDHR3-212ENST00000487084 AKAP12Q02952 1782 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 SLC24A1O60721 1099 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 VPS72Q15906 364 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 SLC12A5Q9H2X9 1139 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 TTC21BQ7Z4L5 1316 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 NRKQ7Z2Y5 1582 aa31.43■■■□□ 2.62
CDHR3-212ENST00000487084 HDGFL2Q7Z4V5 671 aaPredicted RBP31.42■■■□□ 2.62
CDHR3-212ENST00000487084 PUS7Q96PZ0 661 aaKnown RBP31.42■■■□□ 2.62
CDHR3-212ENST00000487084 GLI3P10071 1580 aa31.4■■■□□ 2.62
CDHR3-212ENST00000487084 GCP02774 474 aa31.4■■■□□ 2.62
CDHR3-212ENST00000487084 TMF1P82094 1093 aa31.4■■■□□ 2.62
CDHR3-212ENST00000487084 PIK3C2AO00443 1686 aa31.39■■■□□ 2.62
CDHR3-212ENST00000487084 TTC21AQ8NDW8 1320 aa31.39■■■□□ 2.62
CDHR3-212ENST00000487084 NRAPQ86VF7 1730 aa31.38■■■□□ 2.61
CDHR3-212ENST00000487084 ZBTB7CA1YPR0 619 aa31.38■■■□□ 2.61
CDHR3-212ENST00000487084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.38■■■□□ 2.613e-7■■■■□ 24.1
CDHR3-212ENST00000487084 CD163L1Q9NR16 1453 aa31.38■■■□□ 2.61
CDHR3-212ENST00000487084 TERF2IPQ9NYB0 399 aa31.37■■■□□ 2.61
CDHR3-212ENST00000487084 MON2Q7Z3U7 1717 aa31.36■■■□□ 2.61
CDHR3-212ENST00000487084 STRN4Q9NRL3 753 aa31.35■■■□□ 2.61
CDHR3-212ENST00000487084 A0A1W2PP64 1363 aa31.34■■■□□ 2.61
CDHR3-212ENST00000487084 CPDO75976 1380 aa31.34■■■□□ 2.61
CDHR3-212ENST00000487084 NINLQ9Y2I6 1382 aa31.34■■■□□ 2.61
CDHR3-212ENST00000487084 SLIT3O75094 1523 aa31.33■■■□□ 2.61
CDHR3-212ENST00000487084 SOX12O15370 315 aa31.32■■■□□ 2.6
CDHR3-212ENST00000487084 A0A0G2JS52 829 aa31.31■■■□□ 2.6
CDHR3-212ENST00000487084 MYT1Q01538 1121 aa31.31■■■□□ 2.6
CDHR3-212ENST00000487084 UPF1Q92900 1129 aaKnown RBP eCLIP31.31■■■□□ 2.6
CDHR3-212ENST00000487084 EVA1CP58658 441 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 CDCA8Q53HL2 280 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 NME9Q86XW9 330 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 SEPT12Q8IYM1 358 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 EDC4Q6P2E9 1401 aaKnown RBP31.29■■■□□ 2.6
CDHR3-212ENST00000487084 FAM98CQ17RN3 349 aaKnown RBP31.28■■■□□ 2.6
CDHR3-212ENST00000487084 ZRANB1Q9UGI0 708 aa31.28■■■□□ 2.6
CDHR3-212ENST00000487084 SPATA31A5Q5VU36 1347 aa31.27■■■□□ 2.6
CDHR3-212ENST00000487084 SPATA31A7Q8IWB4 1347 aa31.27■■■□□ 2.6
CDHR3-212ENST00000487084 KCNH5Q8NCM2 988 aa31.27■■■□□ 2.6
CDHR3-212ENST00000487084 CAMTA1Q9Y6Y1 1673 aa31.25■■■□□ 2.59
CDHR3-212ENST00000487084 EIF4G2P78344 907 aaKnown RBP eCLIP31.24■■■□□ 2.59
CDHR3-212ENST00000487084 LMO7Q8WWI1 1683 aa31.24■■■□□ 2.59
CDHR3-212ENST00000487084 USP31Q70CQ4 1352 aa31.22■■■□□ 2.59
CDHR3-212ENST00000487084 ANKRD36BQ8N2N9 1353 aa31.22■■■□□ 2.59
CDHR3-212ENST00000487084 USP35Q9P2H5 1018 aa31.22■■■□□ 2.59
CDHR3-212ENST00000487084 ONECUT3O60422 494 aaPredicted RBP31.21■■■□□ 2.59
CDHR3-212ENST00000487084 SPATA31A1Q5TZJ5 1347 aa31.21■■■□□ 2.59
CDHR3-212ENST00000487084 AATKQ6ZMQ8 1374 aa31.2■■■□□ 2.59
CDHR3-212ENST00000487084 HSPA5P11021 654 aaKnown RBP31.2■■■□□ 2.59
CDHR3-212ENST00000487084 LARP1Q6PKG0 1096 aaKnown RBP31.2■■■□□ 2.59
CDHR3-212ENST00000487084 ARHGEF25Q86VW2 580 aa31.18■■■□□ 2.58
CDHR3-212ENST00000487084 POLR3GLQ9BT43 218 aa31.18■■■□□ 2.58
CDHR3-212ENST00000487084 COL5A2P05997 1499 aaPredicted RBP31.18■■■□□ 2.58
CDHR3-212ENST00000487084 NFAT5O94916 1531 aa31.18■■■□□ 2.58
CDHR3-212ENST00000487084 KRT27Q7Z3Y8 459 aa31.16■■■□□ 2.58
CDHR3-212ENST00000487084 BRWD3Q6RI45 1802 aa31.15■■■□□ 2.58
CDHR3-212ENST00000487084 USP54Q70EL1 1684 aa31.14■■■□□ 2.58
CDHR3-212ENST00000487084 AXIN2Q9Y2T1 843 aa31.13■■■□□ 2.57
CDHR3-212ENST00000487084 OVOS2A0A0J9YW53 1432 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms