RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 PRDM11Q9NQV5 511 aa27.33■■□□□ 1.97
GMDS-205ENST00000486793 PLCH1Q4KWH8 1693 aa27.32■■□□□ 1.96
GMDS-205ENST00000486793 SPATA31A5Q5VU36 1347 aa27.32■■□□□ 1.96
GMDS-205ENST00000486793 SPATA31A7Q8IWB4 1347 aa27.32■■□□□ 1.96
GMDS-205ENST00000486793 NWD2Q9ULI1 1742 aa27.32■■□□□ 1.96
GMDS-205ENST00000486793 TRPM3Q9HCF6 1732 aaPredicted RBP27.31■■□□□ 1.96
GMDS-205ENST00000486793 ABCA3Q99758 1704 aa27.3■■□□□ 1.96
GMDS-205ENST00000486793 NUTM2GQ5VZR2 741 aa27.29■■□□□ 1.96
GMDS-205ENST00000486793 BRWD3Q6RI45 1802 aa27.28■■□□□ 1.96
GMDS-205ENST00000486793 CHRNA2Q15822 529 aa27.28■■□□□ 1.96
GMDS-205ENST00000486793 NBPF8Q3BBV2 869 aa27.28■■□□□ 1.96
GMDS-205ENST00000486793 FAM182BQ5T319 152 aa27.28■■□□□ 1.96
GMDS-205ENST00000486793 CCDC61Q9Y6R9 512 aa27.28■■□□□ 1.96
GMDS-205ENST00000486793 ATP7BP35670 1465 aa27.27■■□□□ 1.96
GMDS-205ENST00000486793 ACEP12821 1306 aa27.27■■□□□ 1.96
GMDS-205ENST00000486793 NBPF1Q3BBV0 1214 aa27.27■■□□□ 1.96
GMDS-205ENST00000486793 ALS2Q96Q42 1657 aa27.27■■□□□ 1.96
GMDS-205ENST00000486793 KIAA0232Q92628 1395 aa27.26■■□□□ 1.95
GMDS-205ENST00000486793 BAG6P46379 1132 aa27.26■■□□□ 1.95
GMDS-205ENST00000486793 ZC3H6P61129 1189 aaKnown RBP27.26■■□□□ 1.95
GMDS-205ENST00000486793 PLEKHG3A1L390 1219 aa27.24■■□□□ 1.95
GMDS-205ENST00000486793 COL14A1Q05707 1796 aaKnown RBP27.23■■□□□ 1.95
GMDS-205ENST00000486793 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
GMDS-205ENST00000486793 POLR3AO14802 1390 aaPredicted RBP27.22■■□□□ 1.95
GMDS-205ENST00000486793 SPATA31A1Q5TZJ5 1347 aa27.21■■□□□ 1.95
GMDS-205ENST00000486793 EN1Q05925 392 aaPredicted RBP27.21■■□□□ 1.95
GMDS-205ENST00000486793 NRAPQ86VF7 1730 aa27.21■■□□□ 1.95
GMDS-205ENST00000486793 PSDA5PKW4 1024 aaPredicted RBP27.19■■□□□ 1.94
GMDS-205ENST00000486793 ABTB2Q8N961 1025 aa27.19■■□□□ 1.94
GMDS-205ENST00000486793 ARHGEF28Q8N1W1 1705 aaKnown RBP27.17■■□□□ 1.94
GMDS-205ENST00000486793 EVA1CP58658 441 aa27.17■■□□□ 1.94
GMDS-205ENST00000486793 SRPK2P78362 688 aaKnown RBP27.16■■□□□ 1.94
GMDS-205ENST00000486793 USP35Q9P2H5 1018 aa27.16■■□□□ 1.94
GMDS-205ENST00000486793 CABP2Q9NPB3 220 aa27.15■■□□□ 1.94
GMDS-205ENST00000486793 CENPJQ9HC77 1338 aaPredicted RBP27.13■■□□□ 1.93
GMDS-205ENST00000486793 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
GMDS-205ENST00000486793 CRYBG1Q9Y4K1 1723 aa27.11■■□□□ 1.93
GMDS-205ENST00000486793 LARP1Q6PKG0 1096 aaKnown RBP27.11■■□□□ 1.93
GMDS-205ENST00000486793 TRIM37O94972 964 aa27.1■■□□□ 1.93
GMDS-205ENST00000486793 GCP02774 474 aa27.1■■□□□ 1.93
GMDS-205ENST00000486793 BARGINQ6ZT62 677 aa27.1■■□□□ 1.93
GMDS-205ENST00000486793 NLRP13Q86W25 1043 aa27.1■■□□□ 1.93
GMDS-205ENST00000486793 EZH2Q15910 746 aaKnown RBP27.09■■□□□ 1.93
GMDS-205ENST00000486793 USP19O94966 1318 aa27.09■■□□□ 1.93
GMDS-205ENST00000486793 PPIP5K1Q6PFW1 1433 aa27.08■■□□□ 1.93
GMDS-205ENST00000486793 CABP1Q9NZU7 370 aa27.08■■□□□ 1.93
GMDS-205ENST00000486793 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
GMDS-205ENST00000486793 ITSN1Q15811 1721 aa27.07■■□□□ 1.92
GMDS-205ENST00000486793 PDE3BQ13370 1112 aa27.07■■□□□ 1.92
GMDS-205ENST00000486793 R3HDM1Q15032 1099 aaKnown RBP27.07■■□□□ 1.92
GMDS-205ENST00000486793 L3MBTL2Q969R5 705 aa27.07■■□□□ 1.92
GMDS-205ENST00000486793 THSD7AQ9UPZ6 1657 aa27.07■■□□□ 1.92
GMDS-205ENST00000486793 CPDO75976 1380 aa27.07■■□□□ 1.92
GMDS-205ENST00000486793 TCP11L2Q8N4U5 519 aa27.06■■□□□ 1.92
GMDS-205ENST00000486793 CAMKK2Q96RR4 588 aa27.06■■□□□ 1.92
GMDS-205ENST00000486793 APBA3O96018 575 aa27.05■■□□□ 1.92
GMDS-205ENST00000486793 DISP2A7MBM2 1401 aa27.05■■□□□ 1.92
GMDS-205ENST00000486793 CAMTA1Q9Y6Y1 1673 aa27.04■■□□□ 1.92
GMDS-205ENST00000486793 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
GMDS-205ENST00000486793 PHRF1Q9P1Y6 1649 aaKnown RBP27.02■■□□□ 1.92
GMDS-205ENST00000486793 NLRP6P59044 892 aa27.02■■□□□ 1.92
GMDS-205ENST00000486793 TOPAZ1Q8N9V7 1692 aa27.01■■□□□ 1.92
GMDS-205ENST00000486793 SIN3AQ96ST3 1273 aa27.01■■□□□ 1.91
GMDS-205ENST00000486793 BRD4O60885 1362 aaPredicted RBP27■■□□□ 1.91
GMDS-205ENST00000486793 ZBTB7CA1YPR0 619 aa27■■□□□ 1.91
GMDS-205ENST00000486793 THRAP3Q9Y2W1 955 aaKnown RBP27■■□□□ 1.91
GMDS-205ENST00000486793 NRKQ7Z2Y5 1582 aa26.97■■□□□ 1.91
GMDS-205ENST00000486793 RGPD1P0DJD0 1748 aa26.96■■□□□ 1.91
GMDS-205ENST00000486793 EVC2Q86UK5 1308 aa26.95■■□□□ 1.91
GMDS-205ENST00000486793 USP6P35125 1406 aa26.95■■□□□ 1.9
GMDS-205ENST00000486793 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
GMDS-205ENST00000486793 LRP5O75197 1615 aa26.94■■□□□ 1.9
GMDS-205ENST00000486793 PARD3Q8TEW0 1356 aa26.93■■□□□ 1.9
GMDS-205ENST00000486793 COL5A2P05997 1499 aaPredicted RBP26.93■■□□□ 1.9
GMDS-205ENST00000486793 AATKQ6ZMQ8 1374 aa26.92■■□□□ 1.9
GMDS-205ENST00000486793 LMO7Q8WWI1 1683 aa26.91■■□□□ 1.9
GMDS-205ENST00000486793 ZNF692Q9BU19 519 aaPredicted RBP26.9■■□□□ 1.9
GMDS-205ENST00000486793 AXIN2Q9Y2T1 843 aa26.9■■□□□ 1.9
GMDS-205ENST00000486793 CRB1P82279 1406 aa26.9■■□□□ 1.9
GMDS-205ENST00000486793 TOM1L2Q6ZVM7 507 aa26.89■■□□□ 1.9
GMDS-205ENST00000486793 TNS1Q9HBL0 1735 aaKnown RBP26.88■■□□□ 1.89
GMDS-205ENST00000486793 TTC21BQ7Z4L5 1316 aa26.88■■□□□ 1.89
GMDS-205ENST00000486793 ROCK2O75116 1388 aaKnown RBP26.87■■□□□ 1.89
GMDS-205ENST00000486793 NBPF14Q5TI25 921 aa26.87■■□□□ 1.89
GMDS-205ENST00000486793 C11orf95C9JLR9 678 aaPredicted RBP26.86■■□□□ 1.89
GMDS-205ENST00000486793 DDB1Q16531 1140 aa26.85■■□□□ 1.89
GMDS-205ENST00000486793 ARHGEF25Q86VW2 580 aa26.85■■□□□ 1.89
GMDS-205ENST00000486793 SOX12O15370 315 aa26.84■■□□□ 1.89
GMDS-205ENST00000486793 QRICH2Q9H0J4 1663 aa26.83■■□□□ 1.89
GMDS-205ENST00000486793 KCNH5Q8NCM2 988 aa26.83■■□□□ 1.89
GMDS-205ENST00000486793 SLIT3O75094 1523 aa26.83■■□□□ 1.89
GMDS-205ENST00000486793 WDR17Q8IZU2 1322 aa26.82■■□□□ 1.88
GMDS-205ENST00000486793 TTC21AQ8NDW8 1320 aa26.79■■□□□ 1.88
GMDS-205ENST00000486793 OVOS2A0A0G2JMS6 1433 aa26.79■■□□□ 1.88
GMDS-205ENST00000486793 OVOS2A0A0J9YW53 1432 aa26.79■■□□□ 1.88
GMDS-205ENST00000486793 OVOS2Q6IE36 1432 aa26.79■■□□□ 1.88
GMDS-205ENST00000486793 CSB-PGBD3P0DP91 1061 aa26.78■■□□□ 1.88
GMDS-205ENST00000486793 PTF1AQ7RTS3 328 aa26.78■■□□□ 1.88
GMDS-205ENST00000486793 MARCH10Q8NA82 808 aaPredicted RBP26.78■■□□□ 1.88
GMDS-205ENST00000486793 PLSCR1O15162 318 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms