RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 COG3Q96JB2 828 aa28.95■■■□□ 2.22
CDK5-204ENST00000485972 ZRANB1Q9UGI0 708 aa28.95■■■□□ 2.22
CDK5-204ENST00000485972 FMN2Q9NZ56 1722 aa28.95■■■□□ 2.22
CDK5-204ENST00000485972 SALL2Q9Y467 1007 aaPredicted RBP28.93■■■□□ 2.22
CDK5-204ENST00000485972 SSH2Q76I76 1423 aa28.9■■■□□ 2.22
CDK5-204ENST00000485972 RGPD8O14715 1765 aaPredicted RBP28.88■■■□□ 2.21
CDK5-204ENST00000485972 TTC21AQ8NDW8 1320 aa28.88■■■□□ 2.21
CDK5-204ENST00000485972 CCDC146Q8IYE0 955 aa28.88■■■□□ 2.21
CDK5-204ENST00000485972 POLKQ9UBT6 870 aa28.88■■■□□ 2.21
CDK5-204ENST00000485972 NRKQ7Z2Y5 1582 aa28.87■■■□□ 2.21
CDK5-204ENST00000485972 FBLN1P23142 703 aa28.87■■■□□ 2.21
CDK5-204ENST00000485972 PHF8Q9UPP1 1060 aa28.87■■■□□ 2.21
CDK5-204ENST00000485972 C19orf44Q9H6X5 657 aa28.85■■■□□ 2.21
CDK5-204ENST00000485972 AATKQ6ZMQ8 1374 aa28.85■■■□□ 2.21
CDK5-204ENST00000485972 NUDCQ9Y266 331 aa28.84■■■□□ 2.21
CDK5-204ENST00000485972 SHPRHQ149N8 1683 aa28.84■■■□□ 2.21
CDK5-204ENST00000485972 PNPLA6Q8IY17 1366 aa28.83■■■□□ 2.21
CDK5-204ENST00000485972 PPM1GO15355 546 aaPredicted RBP28.83■■■□□ 2.21
CDK5-204ENST00000485972 ESCO1Q5FWF5 840 aa28.83■■■□□ 2.21
CDK5-204ENST00000485972 SMG6Q86US8 1419 aaKnown RBP28.83■■■□□ 2.21
CDK5-204ENST00000485972 PDE3BQ13370 1112 aa28.82■■■□□ 2.2
CDK5-204ENST00000485972 TMEM94Q12767 1356 aa28.81■■■□□ 2.2
CDK5-204ENST00000485972 U2AF1L5P0DN76 240 aaPredicted RBP28.8■■■□□ 2.2
CDK5-204ENST00000485972 U2AF1Q01081 240 aaKnown RBP eCLIP28.8■■■□□ 2.2
CDK5-204ENST00000485972 COL3A1P02461 1466 aaPredicted RBP28.8■■■□□ 2.2
CDK5-204ENST00000485972 OVOS2A0A0J9YW53 1432 aa28.8■■■□□ 2.2
CDK5-204ENST00000485972 OVOS2Q6IE36 1432 aa28.8■■■□□ 2.2
CDK5-204ENST00000485972 DIAPH1O60610 1272 aaKnown RBP28.8■■■□□ 2.2
CDK5-204ENST00000485972 EMILIN1Q9Y6C2 1016 aa28.8■■■□□ 2.2
CDK5-204ENST00000485972 STRCQ7RTU9 1775 aa28.79■■■□□ 2.2
CDK5-204ENST00000485972 APAF1O14727 1248 aa28.79■■■□□ 2.2
CDK5-204ENST00000485972 NCOA3Q9Y6Q9 1424 aa28.79■■■□□ 2.2
CDK5-204ENST00000485972 U2SURPO15042 1029 aaKnown RBP28.78■■■□□ 2.2
CDK5-204ENST00000485972 RUNDC1Q96C34 613 aa28.78■■■□□ 2.2
CDK5-204ENST00000485972 RRS1Q15050 365 aaKnown RBP28.77■■■□□ 2.2
CDK5-204ENST00000485972 SUPT16HQ9Y5B9 1047 aaKnown RBP28.77■■■□□ 2.2
CDK5-204ENST00000485972 STRCP1A6NGW2 1772 aa28.76■■■□□ 2.19
CDK5-204ENST00000485972 USP31Q70CQ4 1352 aa28.75■■■□□ 2.19
CDK5-204ENST00000485972 ORAI2Q96SN7 254 aa28.75■■■□□ 2.19
CDK5-204ENST00000485972 ATF3P18847 181 aa28.75■■■□□ 2.19
CDK5-204ENST00000485972 PAK3O75914 559 aaPredicted RBP28.74■■■□□ 2.19
CDK5-204ENST00000485972 PSME1Q06323 249 aa28.74■■■□□ 2.19
CDK5-204ENST00000485972 NGEFQ8N5V2 710 aa28.73■■■□□ 2.19
CDK5-204ENST00000485972 NLRP6P59044 892 aa28.72■■■□□ 2.19
CDK5-204ENST00000485972 CDK12Q9NYV4 1490 aaPredicted RBP28.71■■■□□ 2.19
CDK5-204ENST00000485972 NEFLP07196 543 aa28.71■■■□□ 2.19
CDK5-204ENST00000485972 CDCA7LQ96GN5 454 aa28.71■■■□□ 2.19
CDK5-204ENST00000485972 C1orf167Q5SNV9 1468 aa28.7■■■□□ 2.19
CDK5-204ENST00000485972 ABTB2Q8N961 1025 aa28.7■■■□□ 2.19
CDK5-204ENST00000485972 MAP2P11137 1827 aaKnown RBP28.7■■■□□ 2.18
CDK5-204ENST00000485972 ZNF521Q96K83 1311 aa28.7■■■□□ 2.18
CDK5-204ENST00000485972 DCCP43146 1447 aa28.69■■■□□ 2.18
CDK5-204ENST00000485972 SOX12O15370 315 aa28.68■■■□□ 2.18
CDK5-204ENST00000485972 TCP11L2Q8N4U5 519 aa28.68■■■□□ 2.18
CDK5-204ENST00000485972 FOXO3O43524 673 aa28.67■■■□□ 2.18
CDK5-204ENST00000485972 CADPS2Q86UW7 1296 aa28.67■■■□□ 2.18
CDK5-204ENST00000485972 NUTM2GQ5VZR2 741 aa28.67■■■□□ 2.18
CDK5-204ENST00000485972 PIK3C2AO00443 1686 aa28.67■■■□□ 2.18
CDK5-204ENST00000485972 ZNF335Q9H4Z2 1342 aaPredicted RBP28.66■■■□□ 2.18
CDK5-204ENST00000485972 IL13P35225 146 aa28.66■■■□□ 2.18
CDK5-204ENST00000485972 MSH6P52701 1360 aa28.65■■■□□ 2.18
CDK5-204ENST00000485972 GOLGA2Q08379 1002 aa28.65■■■□□ 2.18
CDK5-204ENST00000485972 FKBP8Q14318 412 aa28.65■■■□□ 2.18
CDK5-204ENST00000485972 PNNQ9H307 717 aaKnown RBP28.65■■■□□ 2.18
CDK5-204ENST00000485972 DMRT2Q9Y5R5 561 aa28.65■■■□□ 2.18
CDK5-204ENST00000485972 PLEKHF1Q96S99 279 aa28.64■■■□□ 2.18
CDK5-204ENST00000485972 MST1RQ04912 1400 aa28.64■■■□□ 2.18
CDK5-204ENST00000485972 RRP7AQ9Y3A4 280 aaKnown RBP28.62■■■□□ 2.17
CDK5-204ENST00000485972 IQSEC2Q5JU85 1478 aa28.62■■■□□ 2.17
CDK5-204ENST00000485972 FCHSD2O94868 740 aa28.62■■■□□ 2.17
CDK5-204ENST00000485972 NEUROD2Q15784 382 aa28.62■■■□□ 2.17
CDK5-204ENST00000485972 MAP3K19Q56UN5 1328 aa28.62■■■□□ 2.17
CDK5-204ENST00000485972 XPCQ01831 940 aaPredicted RBP28.6■■■□□ 2.17
CDK5-204ENST00000485972 LRRC7Q96NW7 1537 aa28.6■■■□□ 2.17
CDK5-204ENST00000485972 WWC1Q8IX03 1113 aa28.6■■■□□ 2.17
CDK5-204ENST00000485972 MAPK8IP3Q9UPT6 1336 aa28.6■■■□□ 2.17
CDK5-204ENST00000485972 NCBP3Q53F19 620 aaKnown RBP28.59■■■□□ 2.17
CDK5-204ENST00000485972 KRT28Q7Z3Y7 464 aa28.59■■■□□ 2.17
CDK5-204ENST00000485972 SLFN5Q08AF3 891 aa28.57■■■□□ 2.16
CDK5-204ENST00000485972 EIF4A2Q14240 407 aaKnown RBP28.57■■■□□ 2.16
CDK5-204ENST00000485972 HSP90AB2PQ58FF8 381 aa28.57■■■□□ 2.16
CDK5-204ENST00000485972 RSPH6AQ9H0K4 717 aa28.57■■■□□ 2.16
CDK5-204ENST00000485972 KIF1AQ12756 1690 aa28.56■■■□□ 2.16
CDK5-204ENST00000485972 SBNO1A3KN83 1393 aa28.56■■■□□ 2.16
CDK5-204ENST00000485972 AMPHP49418 695 aa28.56■■■□□ 2.16
CDK5-204ENST00000485972 CCDC27Q2M243 656 aa28.56■■■□□ 2.16
CDK5-204ENST00000485972 HMOX1P09601 288 aa28.55■■■□□ 2.16
CDK5-204ENST00000485972 PHF23Q9BUL5 403 aaPredicted RBP28.55■■■□□ 2.16
CDK5-204ENST00000485972 PRKAR2BP31323 418 aa28.55■■■□□ 2.16
CDK5-204ENST00000485972 USP54Q70EL1 1684 aa28.54■■■□□ 2.16
CDK5-204ENST00000485972 FLT4P35916 1363 aa28.54■■■□□ 2.16
CDK5-204ENST00000485972 DUSP27Q5VZP5 1158 aa28.54■■■□□ 2.16
CDK5-204ENST00000485972 E9PSI1 815 aa28.53■■■□□ 2.16
CDK5-204ENST00000485972 NEFMP07197 916 aa28.53■■■□□ 2.16
CDK5-204ENST00000485972 TMPOP42166 694 aaKnown RBP28.53■■■□□ 2.16
CDK5-204ENST00000485972 RCAN3Q9UKA8 241 aa28.53■■■□□ 2.16
CDK5-204ENST00000485972 PEAK1Q9H792 1746 aa28.52■■■□□ 2.16
CDK5-204ENST00000485972 TRMT2AQ8IZ69 625 aaKnown RBP28.52■■■□□ 2.16
CDK5-204ENST00000485972 SPINK5Q9NQ38 1064 aaPredicted RBP28.52■■■□□ 2.16
CDK5-204ENST00000485972 LMOD2Q6P5Q4 547 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms