RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
SPTA1-206ENST00000484520 H3BM21 787 aa8.45□□□□□ -1.06
SPTA1-206ENST00000484520 CTHP32929 405 aa8.45□□□□□ -1.06
SPTA1-206ENST00000484520 AMHR2Q16671 573 aa8.45□□□□□ -1.06
SPTA1-206ENST00000484520 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
SPTA1-206ENST00000484520 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
SPTA1-206ENST00000484520 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
SPTA1-206ENST00000484520 MPNDQ8N594 471 aa8.44□□□□□ -1.06
SPTA1-206ENST00000484520 ZSCAN1Q8NBB4 408 aa8.44□□□□□ -1.06
SPTA1-206ENST00000484520 FAM181BA6NEQ2 426 aa8.43□□□□□ -1.06
SPTA1-206ENST00000484520 ZMYND10O75800 440 aa8.43□□□□□ -1.06
SPTA1-206ENST00000484520 TIMP2P16035 220 aa8.43□□□□□ -1.06
SPTA1-206ENST00000484520 WDR4P57081 412 aaKnown RBP8.43□□□□□ -1.06
SPTA1-206ENST00000484520 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
SPTA1-206ENST00000484520 ERBB4Q15303 1308 aa8.43□□□□□ -1.06
SPTA1-206ENST00000484520 CCDC180Q9P1Z9 1646 aa8.43□□□□□ -1.06
SPTA1-206ENST00000484520 SCARF1Q14162 830 aa8.42□□□□□ -1.06
SPTA1-206ENST00000484520 LYPD8Q6UX82 237 aa8.42□□□□□ -1.06
SPTA1-206ENST00000484520 PURBQ96QR8 312 aaKnown RBP8.42□□□□□ -1.06
SPTA1-206ENST00000484520 PCDHB15Q9Y5E8 787 aa8.42□□□□□ -1.06
SPTA1-206ENST00000484520 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
SPTA1-206ENST00000484520 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
SPTA1-206ENST00000484520 ADH1CP00326 375 aa8.41□□□□□ -1.06
SPTA1-206ENST00000484520 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
SPTA1-206ENST00000484520 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
SPTA1-206ENST00000484520 FOXJ1Q92949 421 aa8.41□□□□□ -1.06
SPTA1-206ENST00000484520 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
SPTA1-206ENST00000484520 GJA5P36382 358 aa8.4□□□□□ -1.06
SPTA1-206ENST00000484520 ARID5BQ14865 1188 aa8.4□□□□□ -1.06
SPTA1-206ENST00000484520 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.06
SPTA1-206ENST00000484520 KLF16Q9BXK1 252 aaPredicted RBP8.4□□□□□ -1.06
SPTA1-206ENST00000484520 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.06
SPTA1-206ENST00000484520 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
SPTA1-206ENST00000484520 HRCP23327 699 aa8.39□□□□□ -1.07
SPTA1-206ENST00000484520 DIXDC1Q155Q3 683 aa8.38□□□□□ -1.07
SPTA1-206ENST00000484520 CDK15Q96Q40 435 aa8.38□□□□□ -1.07
SPTA1-206ENST00000484520 SPTLC1O15269 473 aa8.37□□□□□ -1.07
SPTA1-206ENST00000484520 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-206ENST00000484520 PARP9Q8IXQ6 854 aa8.37□□□□□ -1.07
SPTA1-206ENST00000484520 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
SPTA1-206ENST00000484520 ZFAND3Q9H8U3 227 aa8.37□□□□□ -1.07
SPTA1-206ENST00000484520 ZIC2O95409 532 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-206ENST00000484520 AGERQ15109 404 aa8.36□□□□□ -1.07
SPTA1-206ENST00000484520 CABLES1Q8TDN4 633 aa8.36□□□□□ -1.07
SPTA1-206ENST00000484520 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
SPTA1-206ENST00000484520 NR3C2P08235 984 aa8.35□□□□□ -1.07
SPTA1-206ENST00000484520 CSPP1Q1MSJ5 1256 aa8.35□□□□□ -1.07
SPTA1-206ENST00000484520 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
SPTA1-206ENST00000484520 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
SPTA1-206ENST00000484520 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
SPTA1-206ENST00000484520 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
SPTA1-206ENST00000484520 NR5A1Q13285 461 aa8.34□□□□□ -1.07
SPTA1-206ENST00000484520 TRIM66O15016 1216 aa8.33□□□□□ -1.08
SPTA1-206ENST00000484520 MAN1A2O60476 641 aa8.33□□□□□ -1.08
SPTA1-206ENST00000484520 GRM5P41594 1212 aa8.33□□□□□ -1.08
SPTA1-206ENST00000484520 PRPF38BQ5VTL8 546 aaKnown RBP8.33□□□□□ -1.08
SPTA1-206ENST00000484520 TSC1Q92574 1164 aa8.33□□□□□ -1.08
SPTA1-206ENST00000484520 VSIG8P0DPA2 414 aa8.32□□□□□ -1.08
SPTA1-206ENST00000484520 BPHLQ86WA6 291 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-206ENST00000484520 BMP2P12643 396 aa8.3□□□□□ -1.08
SPTA1-206ENST00000484520 LIMD1Q9UGP4 676 aa8.3□□□□□ -1.08
SPTA1-206ENST00000484520 NUTM2BA6NNL0 878 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-206ENST00000484520 NUTM2EB1AL46 878 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-206ENST00000484520 UPP2O95045 317 aa8.29□□□□□ -1.08
SPTA1-206ENST00000484520 QPCTQ16769 361 aa8.29□□□□□ -1.08
SPTA1-206ENST00000484520 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-206ENST00000484520 NUTM2AQ8IVF1 878 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-206ENST00000484520 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
SPTA1-206ENST00000484520 PPFIA3O75145 1194 aa8.28□□□□□ -1.08
SPTA1-206ENST00000484520 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
SPTA1-206ENST00000484520 MEIOBQ8N635 442 aa8.28□□□□□ -1.08
SPTA1-206ENST00000484520 AK7Q96M32 723 aa8.28□□□□□ -1.08
SPTA1-206ENST00000484520 FSHRP23945 695 aa8.27□□□□□ -1.09
SPTA1-206ENST00000484520 ARMC2Q8NEN0 867 aa8.27□□□□□ -1.09
SPTA1-206ENST00000484520 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
SPTA1-206ENST00000484520 LILRB3O75022 631 aa8.26□□□□□ -1.09
SPTA1-206ENST00000484520 SH3RF1Q7Z6J0 888 aa8.26□□□□□ -1.09
SPTA1-206ENST00000484520 DNMT3LQ9UJW3 386 aa8.26□□□□□ -1.09
SPTA1-206ENST00000484520 SOS2Q07890 1332 aaPredicted RBP8.26□□□□□ -1.09
SPTA1-206ENST00000484520 MAGEB6P1A0A0J9YX57 407 aa8.25□□□□□ -1.09
SPTA1-206ENST00000484520 VASH1Q7L8A9 365 aaPredicted RBP8.25□□□□□ -1.09
SPTA1-206ENST00000484520 TUSC1Q2TAM9 212 aa8.24□□□□□ -1.09
SPTA1-206ENST00000484520 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
SPTA1-206ENST00000484520 NBPF14Q5TI25 921 aa8.24□□□□□ -1.09
SPTA1-206ENST00000484520 SH3BP5LQ7L8J4 393 aa8.24□□□□□ -1.09
SPTA1-206ENST00000484520 MAP4K5Q9Y4K4 846 aa8.24□□□□□ -1.09
SPTA1-206ENST00000484520 TRMT44Q8IYL2 757 aaKnown RBP8.23□□□□□ -1.09
SPTA1-206ENST00000484520 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
SPTA1-206ENST00000484520 TSEN34Q9BSV6 310 aaKnown RBP8.23□□□□□ -1.09
SPTA1-206ENST00000484520 PDE4DQ08499 809 aa8.22□□□□□ -1.09
SPTA1-206ENST00000484520 CCDC116Q8IYX3 515 aa8.22□□□□□ -1.09
SPTA1-206ENST00000484520 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
SPTA1-206ENST00000484520 EMILIN1Q9Y6C2 1016 aa8.22□□□□□ -1.09
SPTA1-206ENST00000484520 GPR161Q8N6U8 529 aaKnown RBP8.2□□□□□ -1.1
SPTA1-206ENST00000484520 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
SPTA1-206ENST00000484520 TTLL8A6PVC2 850 aa8.19□□□□□ -1.1
SPTA1-206ENST00000484520 CLK2P49760 499 aaKnown RBP8.19□□□□□ -1.1
SPTA1-206ENST00000484520 CBLBQ13191 982 aa8.19□□□□□ -1.1
SPTA1-206ENST00000484520 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.19□□□□□ -1.1
SPTA1-206ENST00000484520 ERFEQ4G0M1 354 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms