RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, human

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-206	ENST00000484388	PBXIP1	Q96AQ6	731 aa		4.09	□□□□□ -1.75
ABCA4-206	ENST00000484388	GPSM3	Q9Y4H4	160 aa		4.09	□□□□□ -1.75
ABCA4-206	ENST00000484388	PALM3	A6NDB9	673 aa	Predicted RBP	4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	ZPR1	O75312	459 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	ADH1B	P00325	375 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	FBXO45	P0C2W1	286 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	MCCD1	P59942	119 aa	Predicted RBP	4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	COPS2	P61201	443 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	SRPK2	P78362	688 aa	Known RBP	4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	KCNH2	Q12809	1159 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	ZNF592	Q92610	1267 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	KCTD12	Q96CX2	325 aa	Known RBP	4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	UCN2	Q96RP3	112 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	NUDT12	Q9BQG2	462 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	MAP10	Q9P2G4	905 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	ACIN1	Q9UKV3	1341 aa	Known RBP	4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	MYT1L	Q9UL68	1186 aa		4.08	□□□□□ -1.76
ABCA4-206	ENST00000484388	POTEM	A6NI47	508 aa		4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	CTH	P32929	405 aa		4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	TRIM26	Q12899	539 aa	Predicted RBP	4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	PDXDC2P	Q6P474	469 aa		4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	RETREG2	Q8NC44	543 aa		4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	NFATC2IP	Q8NCF5	419 aa		4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	MTR	Q99707	1265 aa		4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	IL21	Q9HBE4	155 aa		4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	TFIP11	Q9UBB9	837 aa	Known RBP	4.07	□□□□□ -1.76
ABCA4-206	ENST00000484388	PTK2	Q05397	1052 aa		4.06	□□□□□ -1.76
ABCA4-206	ENST00000484388	TJAP1	Q5JTD0	557 aa		4.06	□□□□□ -1.76
ABCA4-206	ENST00000484388	NBPF14	Q5TI25	921 aa		4.06	□□□□□ -1.76
ABCA4-206	ENST00000484388	KCTD17	Q8N5Z5	321 aa		4.06	□□□□□ -1.76
ABCA4-206	ENST00000484388	PRDM9	Q9NQV7	894 aa		4.06	□□□□□ -1.76
ABCA4-206	ENST00000484388	ATP9B	O43861	1147 aa		4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	TLL1	O43897	1013 aa		4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	LMOD1	P29536	600 aa	Predicted RBP	4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	TBC1D9	Q6ZT07	1266 aa		4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	CDAN1	Q8IWY9	1227 aa		4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	SLC6A16	Q9GZN6	736 aa		4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	PCDH10	Q9P2E7	1040 aa		4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	UST	Q9Y2C2	406 aa		4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	MAFB	Q9Y5Q3	323 aa	Predicted RBP	4.05	□□□□□ -1.76
ABCA4-206	ENST00000484388	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	ZBTB7C	A1YPR0	619 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	ATG7	O95352	703 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	RFX1	P22670	979 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	SH3BP5L	Q7L8J4	393 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	PLEKHM2	Q8IWE5	1019 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	OCSTAMP	Q9BR26	566 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	UNC93B1	Q9H1C4	597 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	PODXL2	Q9NZ53	605 aa		4.04	□□□□□ -1.76
ABCA4-206	ENST00000484388	LZTS3	O60299	673 aa	Predicted RBP	4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	CSB-PGBD3	P0DP91	1061 aa		4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	PTPN5	P54829	565 aa		4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	KANK4	Q5T7N3	995 aa	Predicted RBP	4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	PHTF2	Q8N3S3	785 aa		4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	ZNF516	Q92618	1163 aa		4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	ARHGAP9	Q9BRR9	750 aa		4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	CEP126	Q9P2H0	1117 aa		4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	CHIC2	Q9UKJ5	165 aa		4.03	□□□□□ -1.76
ABCA4-206	ENST00000484388	ELOA	Q14241	798 aa	Known RBP	4.02	□□□□□ -1.77
ABCA4-206	ENST00000484388	POTEG	Q6S5H5	508 aa		4.02	□□□□□ -1.77
ABCA4-206	ENST00000484388	SH3RF1	Q7Z6J0	888 aa		4.02	□□□□□ -1.77
ABCA4-206	ENST00000484388	CCDC24	Q8N4L8	307 aa		4.02	□□□□□ -1.77
ABCA4-206	ENST00000484388	ADAM32	Q8TC27	787 aa		4.02	□□□□□ -1.77
ABCA4-206	ENST00000484388	USP17L5	A8MUK1	530 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	PATL2	C9JE40	543 aa	Known RBP	4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	PIK3CD	O00329	1044 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	SKI	P12755	728 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	MAP7D1	Q3KQU3	841 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	SLFNL1	Q499Z3	407 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	ZBTB33	Q86T24	672 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	BPHL	Q86WA6	291 aa	Predicted RBP	4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	FAM174A	Q8TBP5	190 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	VRTN	Q9H8Y1	702 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	PCDHB9	Q9Y5E1	797 aa		4.01	□□□□□ -1.77
ABCA4-206	ENST00000484388	USP17L3	A6NCW0	530 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	USP17L4	A6NCW7	530 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	BRD1	O95696	1058 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	ITGBL1	O95965	494 aa	Predicted RBP	4	□□□□□ -1.77
ABCA4-206	ENST00000484388	S1PR4	O95977	384 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	USP17L2	Q6R6M4	530 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	USP17L1	Q7RTZ2	530 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	DZIP3	Q86Y13	1208 aa	Known RBP	4	□□□□□ -1.77
ABCA4-206	ENST00000484388	RNF135	Q8IUD6	432 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	ZNF511	Q8NB15	262 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	NKX2-3	Q8TAU0	364 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	BAP1	Q92560	729 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	HCST	Q9UBK5	93 aa		4	□□□□□ -1.77
ABCA4-206	ENST00000484388	FCF1	Q9Y324	198 aa	Known RBP	4	□□□□□ -1.77
ABCA4-206	ENST00000484388	TMEM88B	A6NKF7	163 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	FAM196B	A6NMK8	535 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	ATP5J2-PTCD1	G3V325	749 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	KCNC4	Q03721	635 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	KCNA1	Q09470	495 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	CDCA8	Q53HL2	280 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	TRAF7	Q6Q0C0	670 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	CCDC125	Q86Z20	511 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	TRMT44	Q8IYL2	757 aa	Known RBP	3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	PLPP7	Q8NBV4	271 aa		3.99	□□□□□ -1.77
ABCA4-206	ENST00000484388	C1QTNF2	Q9BXJ5	285 aa		3.99	□□□□□ -1.77

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