RNA–Protein interactions for RNA: ENST00000483558.5

PKD1-215, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 577 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-215ENST00000483558 C1QTNF8P60827 252 aa25.57■■□□□ 1.68
PKD1-215ENST00000483558 NRXN1Q9ULB1 1477 aa25.57■■□□□ 1.68
PKD1-215ENST00000483558 SAFB2Q14151 953 aaKnown RBP eCLIP25.55■■□□□ 1.68
PKD1-215ENST00000483558 SPATA31A1Q5TZJ5 1347 aa25.55■■□□□ 1.68
PKD1-215ENST00000483558 RGL3Q3MIN7 710 aa25.54■■□□□ 1.68
PKD1-215ENST00000483558 STRN4Q9NRL3 753 aa25.54■■□□□ 1.68
PKD1-215ENST00000483558 USP35Q9P2H5 1018 aa25.54■■□□□ 1.68
PKD1-215ENST00000483558 KNDC1Q76NI1 1749 aa25.52■■□□□ 1.68
PKD1-215ENST00000483558 PRDM11Q9NQV5 511 aa25.52■■□□□ 1.68
PKD1-215ENST00000483558 PDE3BQ13370 1112 aa25.51■■□□□ 1.67
PKD1-215ENST00000483558 CHRNA2Q15822 529 aa25.5■■□□□ 1.67
PKD1-215ENST00000483558 YTHDC2Q9H6S0 1430 aaKnown RBP25.49■■□□□ 1.67
PKD1-215ENST00000483558 PDGFDQ9GZP0 370 aaPredicted RBP25.48■■□□□ 1.67
PKD1-215ENST00000483558 TRPM3Q9HCF6 1732 aaPredicted RBP25.48■■□□□ 1.67
PKD1-215ENST00000483558 UTRNP46939 3433 aa25.48■■□□□ 1.67
PKD1-215ENST00000483558 RRBP1Q9P2E9 1410 aaKnown RBP25.47■■□□□ 1.67
PKD1-215ENST00000483558 ALS2Q96Q42 1657 aa25.45■■□□□ 1.67
PKD1-215ENST00000483558 CHD4Q14839 1912 aa25.45■■□□□ 1.67
PKD1-215ENST00000483558 NRKQ7Z2Y5 1582 aa25.44■■□□□ 1.66
PKD1-215ENST00000483558 PAK3O75914 559 aaPredicted RBP25.44■■□□□ 1.66
PKD1-215ENST00000483558 ZBTB7AO95365 584 aa25.44■■□□□ 1.66
PKD1-215ENST00000483558 SIRT1Q96EB6 747 aa25.42■■□□□ 1.66
PKD1-215ENST00000483558 ATF5Q9Y2D1 282 aaPredicted RBP25.42■■□□□ 1.66
PKD1-215ENST00000483558 PRAM1Q96QH2 718 aa25.41■■□□□ 1.66
PKD1-215ENST00000483558 SLC4A1APQ9BWU0 796 aaKnown RBP25.41■■□□□ 1.66
PKD1-215ENST00000483558 ANO8Q9HCE9 1232 aaPredicted RBP25.41■■□□□ 1.66
PKD1-215ENST00000483558 KIAA0232Q92628 1395 aa25.41■■□□□ 1.66
PKD1-215ENST00000483558 EVA1CP58658 441 aa25.4■■□□□ 1.66
PKD1-215ENST00000483558 ZC3H6P61129 1189 aaKnown RBP25.4■■□□□ 1.66
PKD1-215ENST00000483558 PPARGC1BQ86YN6 1023 aaKnown RBP25.4■■□□□ 1.66
PKD1-215ENST00000483558 GPRASP1Q5JY77 1395 aa25.4■■□□□ 1.66
PKD1-215ENST00000483558 CRYBG1Q9Y4K1 1723 aa25.4■■□□□ 1.66
PKD1-215ENST00000483558 MYOM1P52179 1685 aa25.39■■□□□ 1.66
PKD1-215ENST00000483558 ACIN1Q9UKV3 1341 aaKnown RBP25.37■■□□□ 1.65
PKD1-215ENST00000483558 CASZ1Q86V15 1759 aa25.37■■□□□ 1.65
PKD1-215ENST00000483558 PTGER2P43116 358 aa25.36■■□□□ 1.65
PKD1-215ENST00000483558 BARGINQ6ZT62 677 aa25.36■■□□□ 1.65
PKD1-215ENST00000483558 SYT17Q9BSW7 474 aa25.36■■□□□ 1.65
PKD1-215ENST00000483558 HIRIP3Q9BW71 556 aaPredicted RBP25.36■■□□□ 1.65
PKD1-215ENST00000483558 FHDC1Q9C0D6 1143 aaPredicted RBP25.36■■□□□ 1.65
PKD1-215ENST00000483558 NUTM2GQ5VZR2 741 aa25.35■■□□□ 1.65
PKD1-215ENST00000483558 POGKQ9P215 609 aa25.35■■□□□ 1.65
PKD1-215ENST00000483558 LARP1Q6PKG0 1096 aaKnown RBP25.34■■□□□ 1.65
PKD1-215ENST00000483558 PIK3C2GO75747 1445 aa25.34■■□□□ 1.65
PKD1-215ENST00000483558 ANKRD30BQ9BXX2 1392 aa25.33■■□□□ 1.65
PKD1-215ENST00000483558 CFAP70Q5T0N1 1121 aa25.33■■□□□ 1.65
PKD1-215ENST00000483558 NGDNQ8NEJ9 315 aaKnown RBP25.33■■□□□ 1.65
PKD1-215ENST00000483558 PRR36Q9H6K5 1346 aa25.33■■□□□ 1.64
PKD1-215ENST00000483558 ANKARQ7Z5J8 1434 aa25.32■■□□□ 1.64
PKD1-215ENST00000483558 PTF1AQ7RTS3 328 aa25.32■■□□□ 1.64
PKD1-215ENST00000483558 BCL11BQ9C0K0 894 aaPredicted RBP25.32■■□□□ 1.64
PKD1-215ENST00000483558 TCP11L2Q8N4U5 519 aa25.31■■□□□ 1.64
PKD1-215ENST00000483558 C14orf93Q9H972 538 aaKnown RBP25.31■■□□□ 1.64
PKD1-215ENST00000483558 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
PKD1-215ENST00000483558 CEP350Q5VT06 3117 aa25.3■■□□□ 1.64
PKD1-215ENST00000483558 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
PKD1-215ENST00000483558 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
PKD1-215ENST00000483558 GIGYF1O75420 1035 aaPredicted RBP25.28■■□□□ 1.64
PKD1-215ENST00000483558 PROM2Q8N271 834 aa25.27■■□□□ 1.64
PKD1-215ENST00000483558 MINK1Q8N4C8 1332 aaPredicted RBP25.27■■□□□ 1.64
PKD1-215ENST00000483558 PLSCR1O15162 318 aa25.26■■□□□ 1.63
PKD1-215ENST00000483558 SBF2Q86WG5 1849 aa25.26■■□□□ 1.63
PKD1-215ENST00000483558 PHRF1Q9P1Y6 1649 aaKnown RBP25.24■■□□□ 1.63
PKD1-215ENST00000483558 GPR162Q16538 588 aa25.19■■□□□ 1.62
PKD1-215ENST00000483558 STK32BQ9NY57 414 aa25.19■■□□□ 1.62
PKD1-215ENST00000483558 TRAK1Q9UPV9 953 aa25.19■■□□□ 1.62
PKD1-215ENST00000483558 RGPD3A6NKT7 1758 aaPredicted RBP25.18■■□□□ 1.62
PKD1-215ENST00000483558 RGPD4Q7Z3J3 1758 aa25.18■■□□□ 1.62
PKD1-215ENST00000483558 PEAK1Q9H792 1746 aa25.18■■□□□ 1.62
PKD1-215ENST00000483558 PARP4Q9UKK3 1724 aaKnown RBP25.17■■□□□ 1.62
PKD1-215ENST00000483558 WASLO00401 505 aaPredicted RBP25.17■■□□□ 1.62
PKD1-215ENST00000483558 THRAP3Q9Y2W1 955 aaKnown RBP25.17■■□□□ 1.62
PKD1-215ENST00000483558 OVOS2A0A0G2JMS6 1433 aa25.16■■□□□ 1.62
PKD1-215ENST00000483558 OVOS2A0A0J9YW53 1432 aa25.16■■□□□ 1.62
PKD1-215ENST00000483558 SLC15A2Q16348 729 aa25.16■■□□□ 1.62
PKD1-215ENST00000483558 OVOS2Q6IE36 1432 aa25.16■■□□□ 1.62
PKD1-215ENST00000483558 SGIP1Q9BQI5 828 aa25.16■■□□□ 1.62
PKD1-215ENST00000483558 ARXQ96QS3 562 aa25.15■■□□□ 1.62
PKD1-215ENST00000483558 MTFR1LQ9H019 292 aa25.15■■□□□ 1.62
PKD1-215ENST00000483558 DLC1Q96QB1 1528 aa25.15■■□□□ 1.62
PKD1-215ENST00000483558 TULP4Q9NRJ4 1543 aa25.15■■□□□ 1.62
PKD1-215ENST00000483558 C11orf95C9JLR9 678 aaPredicted RBP25.14■■□□□ 1.62
PKD1-215ENST00000483558 TXNRD1Q16881 649 aa25.13■■□□□ 1.61
PKD1-215ENST00000483558 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
PKD1-215ENST00000483558 ZBTB7CA1YPR0 619 aa25.12■■□□□ 1.61
PKD1-215ENST00000483558 EIF3AQ14152 1382 aaKnown RBP25.11■■□□□ 1.61
PKD1-215ENST00000483558 DDB1Q16531 1140 aa25.11■■□□□ 1.61
PKD1-215ENST00000483558 LMO7Q8WWI1 1683 aa25.1■■□□□ 1.61
PKD1-215ENST00000483558 KLHL34Q8N239 644 aa25.1■■□□□ 1.61
PKD1-215ENST00000483558 NUDT16Q96DE0 195 aaKnown RBP25.1■■□□□ 1.61
PKD1-215ENST00000483558 ABTB2Q8N961 1025 aa25.08■■□□□ 1.61
PKD1-215ENST00000483558 MARCH10Q8NA82 808 aaPredicted RBP25.08■■□□□ 1.61
PKD1-215ENST00000483558 ATP7BP35670 1465 aa25.07■■□□□ 1.6
PKD1-215ENST00000483558 LRRC37A3O60309 1634 aa25.05■■□□□ 1.6
PKD1-215ENST00000483558 COL5A2P05997 1499 aaPredicted RBP25.05■■□□□ 1.6
PKD1-215ENST00000483558 MPHOSPH9Q99550 1183 aa25.05■■□□□ 1.6
PKD1-215ENST00000483558 SHANK3Q9BYB0 1731 aa25.05■■□□□ 1.6
PKD1-215ENST00000483558 CPDO75976 1380 aa25.04■■□□□ 1.6
PKD1-215ENST00000483558 CRB1P82279 1406 aa25.03■■□□□ 1.6
PKD1-215ENST00000483558 ACEP12821 1306 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms