RNA–Protein interactions for RNA: ENST00000481932.1

SH3YL1-223, Transcript of SH3 and SYLF domain containing 1, human

TSL 3

Gene SH3YL1, Length 885 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-223	ENST00000481932	EFCAB3	Q8N7B9	438 aa		11.93	□□□□□ -0.5
SH3YL1-223	ENST00000481932	PTCH1	Q13635	1447 aa		11.93	□□□□□ -0.5
SH3YL1-223	ENST00000481932	ZNF326	Q5BKZ1	582 aa	Known RBP	11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	C19orf44	Q9H6X5	657 aa		11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	AMOTL2	Q9Y2J4	779 aa		11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	MST1R	Q04912	1400 aa		11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	PRAG1	Q86YV5	1406 aa		11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	PPL	O60437	1756 aa		11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	MET	P08581	1390 aa		11.92	□□□□□ -0.5
SH3YL1-223	ENST00000481932	ATF3	P18847	181 aa		11.91	□□□□□ -0.5
SH3YL1-223	ENST00000481932	STK25	O00506	426 aa		11.9	□□□□□ -0.5
SH3YL1-223	ENST00000481932	SPATA31A6	Q5VVP1	1343 aa		11.89	□□□□□ -0.51
SH3YL1-223	ENST00000481932	SOX12	O15370	315 aa		11.89	□□□□□ -0.51
SH3YL1-223	ENST00000481932	STK24	Q9Y6E0	443 aa		11.89	□□□□□ -0.51
SH3YL1-223	ENST00000481932	POTEA	Q6S8J7	498 aa		11.88	□□□□□ -0.51
SH3YL1-223	ENST00000481932	BRINP3	Q76B58	766 aa		11.88	□□□□□ -0.51
SH3YL1-223	ENST00000481932	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.88	□□□□□ -0.51
SH3YL1-223	ENST00000481932	LAMC1	P11047	1609 aa		11.88	□□□□□ -0.51
SH3YL1-223	ENST00000481932	SETD5	Q9C0A6	1442 aa		11.87	□□□□□ -0.51
SH3YL1-223	ENST00000481932	IFT172	Q9UG01	1749 aa		11.87	□□□□□ -0.51
SH3YL1-223	ENST00000481932	CDC42BPG	Q6DT37	1551 aa		11.86	□□□□□ -0.51
SH3YL1-223	ENST00000481932	TRIM52	Q96A61	297 aa		11.85	□□□□□ -0.51
SH3YL1-223	ENST00000481932	CCDC144A	A2RUR9	1427 aa		11.84	□□□□□ -0.51
SH3YL1-223	ENST00000481932	C1orf167	Q5SNV9	1468 aa		11.83	□□□□□ -0.52
SH3YL1-223	ENST00000481932	KNDC1	Q76NI1	1749 aa		11.83	□□□□□ -0.52
SH3YL1-223	ENST00000481932	ROBO2	Q9HCK4	1378 aa		11.83	□□□□□ -0.52
SH3YL1-223	ENST00000481932	MEX3C	Q5U5Q3	659 aa	Known RBP	11.83	□□□□□ -0.52
SH3YL1-223	ENST00000481932	RPGRIP1L	Q68CZ1	1315 aa		11.82	□□□□□ -0.52
SH3YL1-223	ENST00000481932	PNPLA6	Q8IY17	1366 aa		11.81	□□□□□ -0.52
SH3YL1-223	ENST00000481932	SPATA31E1	Q6ZUB1	1445 aa		11.81	□□□□□ -0.52
SH3YL1-223	ENST00000481932	TECPR2	O15040	1411 aa		11.8	□□□□□ -0.52
SH3YL1-223	ENST00000481932	ZNF772	Q68DY9	489 aa	Predicted RBP	11.8	□□□□□ -0.52
SH3YL1-223	ENST00000481932	DPY19L2	Q6NUT2	758 aa		11.8	□□□□□ -0.52
SH3YL1-223	ENST00000481932	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.8	□□□□□ -0.52
SH3YL1-223	ENST00000481932	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.8	□□□□□ -0.52
SH3YL1-223	ENST00000481932	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.79	□□□□□ -0.52
SH3YL1-223	ENST00000481932	PIK3C2G	O75747	1445 aa		11.79	□□□□□ -0.52
SH3YL1-223	ENST00000481932		G3V3G9	751 aa		11.79	□□□□□ -0.52
SH3YL1-223	ENST00000481932	NLRP6	P59044	892 aa		11.79	□□□□□ -0.52
SH3YL1-223	ENST00000481932	C3orf67	Q6ZVT6	689 aa		11.79	□□□□□ -0.52
SH3YL1-223	ENST00000481932	HS6ST3	Q8IZP7	471 aa		11.79	□□□□□ -0.52
SH3YL1-223	ENST00000481932	PHF8	Q9UPP1	1060 aa		11.79	□□□□□ -0.52
SH3YL1-223	ENST00000481932	SLAIN1	Q8ND83	568 aa		11.78	□□□□□ -0.52
SH3YL1-223	ENST00000481932	BOLA1	Q9Y3E2	137 aa		11.78	□□□□□ -0.52
SH3YL1-223	ENST00000481932	ANKRD30B	Q9BXX2	1392 aa		11.78	□□□□□ -0.52
SH3YL1-223	ENST00000481932	DDX17	Q92841	729 aa	Known RBP	11.77	□□□□□ -0.53
SH3YL1-223	ENST00000481932	LRRC59	Q96AG4	307 aa	Known RBP	11.77	□□□□□ -0.53
SH3YL1-223	ENST00000481932	MYOM2	P54296	1465 aa		11.76	□□□□□ -0.53
SH3YL1-223	ENST00000481932	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.76	□□□□□ -0.53
SH3YL1-223	ENST00000481932	NUTM2E	B1AL46	878 aa	Predicted RBP	11.76	□□□□□ -0.53
SH3YL1-223	ENST00000481932	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.76	□□□□□ -0.53
SH3YL1-223	ENST00000481932	MS4A4A	Q96JQ5	239 aa		11.76	□□□□□ -0.53
SH3YL1-223	ENST00000481932	FMN2	Q9NZ56	1722 aa		11.76	□□□□□ -0.53
SH3YL1-223	ENST00000481932	AFF2	P51816	1311 aa		11.76	□□□□□ -0.53
SH3YL1-223	ENST00000481932	KIF1A	Q12756	1690 aa		11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	FBXO22	Q8NEZ5	403 aa		11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	MFRP	Q9BY79	579 aa		11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	ADGRF5	Q8IZF2	1346 aa		11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	LRPPRC	P42704	1394 aa	Known RBP	11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	RGS12	O14924	1447 aa		11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	PXDN	Q92626	1479 aa		11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	NRXN1	Q9ULB1	1477 aa		11.75	□□□□□ -0.53
SH3YL1-223	ENST00000481932	SOS2	Q07890	1332 aa	Predicted RBP	11.74	□□□□□ -0.53
SH3YL1-223	ENST00000481932	ORAI2	Q96SN7	254 aa		11.73	□□□□□ -0.53
SH3YL1-223	ENST00000481932	MPHOSPH9	Q99550	1183 aa		11.73	□□□□□ -0.53
SH3YL1-223	ENST00000481932	MARF1	Q9Y4F3	1742 aa	Known RBP	11.72	□□□□□ -0.53
SH3YL1-223	ENST00000481932	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.72	□□□□□ -0.53
SH3YL1-223	ENST00000481932	C8orf37	Q96NL8	207 aa		11.72	□□□□□ -0.53
SH3YL1-223	ENST00000481932	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.72	□□□□□ -0.53
SH3YL1-223	ENST00000481932	ABCC11	Q96J66	1382 aa		11.71	□□□□□ -0.53
SH3YL1-223	ENST00000481932	NPHP3	Q7Z494	1330 aa		11.71	□□□□□ -0.53
SH3YL1-223	ENST00000481932	RXRB	P28702	533 aa		11.71	□□□□□ -0.53
SH3YL1-223	ENST00000481932	PLEKHH1	Q9ULM0	1364 aa		11.7	□□□□□ -0.54
SH3YL1-223	ENST00000481932	ACIN1	Q9UKV3	1341 aa	Known RBP	11.7	□□□□□ -0.54
SH3YL1-223	ENST00000481932	RGL3	Q3MIN7	710 aa		11.7	□□□□□ -0.54
SH3YL1-223	ENST00000481932	ADGRB2	O60241	1585 aa		11.7	□□□□□ -0.54
SH3YL1-223	ENST00000481932	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.69	□□□□□ -0.54
SH3YL1-223	ENST00000481932	MICALL2	Q8IY33	904 aa		11.69	□□□□□ -0.54
SH3YL1-223	ENST00000481932	DLC1	Q96QB1	1528 aa		11.69	□□□□□ -0.54
SH3YL1-223	ENST00000481932	RAB3GAP2	Q9H2M9	1393 aa		11.68	□□□□□ -0.54
SH3YL1-223	ENST00000481932	USP32	Q8NFA0	1604 aa		11.68	□□□□□ -0.54
SH3YL1-223	ENST00000481932	ADAMTS2	O95450	1211 aa		11.68	□□□□□ -0.54
SH3YL1-223	ENST00000481932	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
SH3YL1-223	ENST00000481932	ADGRB1	O14514	1584 aa		11.67	□□□□□ -0.54
SH3YL1-223	ENST00000481932	ABCA3	Q99758	1704 aa		11.67	□□□□□ -0.54
SH3YL1-223	ENST00000481932	ESCO1	Q5FWF5	840 aa		11.67	□□□□□ -0.54
SH3YL1-223	ENST00000481932	STK26	Q9P289	416 aa		11.67	□□□□□ -0.54
SH3YL1-223	ENST00000481932	ATRN	O75882	1429 aa		11.67	□□□□□ -0.54
SH3YL1-223	ENST00000481932	RBM6	P78332	1123 aa	Known RBP	11.66	□□□□□ -0.54
SH3YL1-223	ENST00000481932	WAPL	Q7Z5K2	1190 aa		11.66	□□□□□ -0.54
SH3YL1-223	ENST00000481932	TMEM132E	Q6IEE7	984 aa		11.65	□□□□□ -0.54
SH3YL1-223	ENST00000481932	NGLY1	Q96IV0	654 aa		11.65	□□□□□ -0.54
SH3YL1-223	ENST00000481932	TNS3	Q68CZ2	1445 aa		11.64	□□□□□ -0.55
SH3YL1-223	ENST00000481932	XPC	Q01831	940 aa	Predicted RBP	11.64	□□□□□ -0.55
SH3YL1-223	ENST00000481932	QTRT2	Q9H974	415 aa	Known RBP	11.64	□□□□□ -0.55
SH3YL1-223	ENST00000481932	USP21	Q9UK80	565 aa		11.64	□□□□□ -0.55
SH3YL1-223	ENST00000481932	DHX57	Q6P158	1386 aa	Known RBP	11.64	□□□□□ -0.55
SH3YL1-223	ENST00000481932	RGPD8	O14715	1765 aa	Predicted RBP	11.64	□□□□□ -0.55
SH3YL1-223	ENST00000481932	ANKAR	Q7Z5J8	1434 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms