RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PARD3Q8TEW0 1356 aa22.39■■□□□ 1.18
HDAC6-224ENST00000481929 TRIM37O94972 964 aa22.39■■□□□ 1.17
HDAC6-224ENST00000481929 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.17
HDAC6-224ENST00000481929 FAM196AQ6ZSG2 479 aa22.38■■□□□ 1.17
HDAC6-224ENST00000481929 ALS2Q96Q42 1657 aa22.38■■□□□ 1.17
HDAC6-224ENST00000481929 PRDM11Q9NQV5 511 aa22.37■■□□□ 1.17
HDAC6-224ENST00000481929 POGKQ9P215 609 aa22.37■■□□□ 1.17
HDAC6-224ENST00000481929 APBA3O96018 575 aa22.36■■□□□ 1.17
HDAC6-224ENST00000481929 CFAP70Q5T0N1 1121 aa22.35■■□□□ 1.17
HDAC6-224ENST00000481929 SPATA31A1Q5TZJ5 1347 aa22.34■■□□□ 1.17
HDAC6-224ENST00000481929 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
HDAC6-224ENST00000481929 DLC1Q96QB1 1528 aa22.33■■□□□ 1.17
HDAC6-224ENST00000481929 NBPF8Q3BBV2 869 aa22.32■■□□□ 1.16
HDAC6-224ENST00000481929 NBPF14Q5TI25 921 aa22.32■■□□□ 1.16
HDAC6-224ENST00000481929 EIF3AQ14152 1382 aaKnown RBP22.32■■□□□ 1.16
HDAC6-224ENST00000481929 CRYBG1Q9Y4K1 1723 aa22.31■■□□□ 1.16
HDAC6-224ENST00000481929 RREB1Q92766 1687 aa22.31■■□□□ 1.16
HDAC6-224ENST00000481929 DCAF8L1A6NGE4 600 aa22.31■■□□□ 1.16
HDAC6-224ENST00000481929 PPP1R1BQ9UD71 204 aaPredicted RBP22.31■■□□□ 1.16
HDAC6-224ENST00000481929 PAK3O75914 559 aaPredicted RBP22.3■■□□□ 1.16
HDAC6-224ENST00000481929 MPHOSPH9Q99550 1183 aa22.29■■□□□ 1.16
HDAC6-224ENST00000481929 HIRIP3Q9BW71 556 aaPredicted RBP22.29■■□□□ 1.16
HDAC6-224ENST00000481929 STRN4Q9NRL3 753 aa22.29■■□□□ 1.16
HDAC6-224ENST00000481929 NUP188Q5SRE5 1749 aa22.28■■□□□ 1.16
HDAC6-224ENST00000481929 KIAA0232Q92628 1395 aa22.28■■□□□ 1.16
HDAC6-224ENST00000481929 NGDNQ8NEJ9 315 aaKnown RBP22.28■■□□□ 1.16
HDAC6-224ENST00000481929 SPON1Q9HCB6 807 aa22.28■■□□□ 1.16
HDAC6-224ENST00000481929 PRR36Q9H6K5 1346 aa22.28■■□□□ 1.16
HDAC6-224ENST00000481929 TULP4Q9NRJ4 1543 aa22.27■■□□□ 1.16
HDAC6-224ENST00000481929 PDE3BQ13370 1112 aa22.27■■□□□ 1.16
HDAC6-224ENST00000481929 NINLQ9Y2I6 1382 aa22.26■■□□□ 1.15
HDAC6-224ENST00000481929 CHRNA2Q15822 529 aa22.26■■□□□ 1.15
HDAC6-224ENST00000481929 USP35Q9P2H5 1018 aa22.25■■□□□ 1.15
HDAC6-224ENST00000481929 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
HDAC6-224ENST00000481929 KCNQ2O43526 872 aa22.23■■□□□ 1.15
HDAC6-224ENST00000481929 BARGINQ6ZT62 677 aa22.23■■□□□ 1.15
HDAC6-224ENST00000481929 WASLO00401 505 aaPredicted RBP22.22■■□□□ 1.15
HDAC6-224ENST00000481929 TRAK1Q9UPV9 953 aa22.22■■□□□ 1.15
HDAC6-224ENST00000481929 PHRF1Q9P1Y6 1649 aaKnown RBP22.21■■□□□ 1.15
HDAC6-224ENST00000481929 EVA1CP58658 441 aa22.21■■□□□ 1.15
HDAC6-224ENST00000481929 ZC3H6P61129 1189 aaKnown RBP22.21■■□□□ 1.15
HDAC6-224ENST00000481929 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
HDAC6-224ENST00000481929 ADGRB1O14514 1584 aa22.21■■□□□ 1.15
HDAC6-224ENST00000481929 ATP7BP35670 1465 aa22.19■■□□□ 1.14
HDAC6-224ENST00000481929 TCP11L2Q8N4U5 519 aa22.17■■□□□ 1.14
HDAC6-224ENST00000481929 ITSN1Q15811 1721 aa22.15■■□□□ 1.14
HDAC6-224ENST00000481929 NUTM2GQ5VZR2 741 aa22.15■■□□□ 1.14
HDAC6-224ENST00000481929 C11orf95C9JLR9 678 aaPredicted RBP22.14■■□□□ 1.13
HDAC6-224ENST00000481929 LARP1Q6PKG0 1096 aaKnown RBP22.14■■□□□ 1.13
HDAC6-224ENST00000481929 CAMTA1Q9Y6Y1 1673 aa22.13■■□□□ 1.13
HDAC6-224ENST00000481929 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
HDAC6-224ENST00000481929 NUDT16Q96DE0 195 aaKnown RBP22.11■■□□□ 1.13
HDAC6-224ENST00000481929 NRKQ7Z2Y5 1582 aa22.11■■□□□ 1.13
HDAC6-224ENST00000481929 PARP4Q9UKK3 1724 aaKnown RBP22.09■■□□□ 1.13
HDAC6-224ENST00000481929 OVOS2A0A0G2JMS6 1433 aa22.09■■□□□ 1.13
HDAC6-224ENST00000481929 OVOS2A0A0J9YW53 1432 aa22.09■■□□□ 1.13
HDAC6-224ENST00000481929 OVOS2Q6IE36 1432 aa22.09■■□□□ 1.13
HDAC6-224ENST00000481929 CPDO75976 1380 aa22.09■■□□□ 1.13
HDAC6-224ENST00000481929 LMO7Q8WWI1 1683 aa22.08■■□□□ 1.13
HDAC6-224ENST00000481929 RGPD3A6NKT7 1758 aaPredicted RBP22.08■■□□□ 1.13
HDAC6-224ENST00000481929 RGPD4Q7Z3J3 1758 aa22.08■■□□□ 1.13
HDAC6-224ENST00000481929 ZNF784Q8NCA9 323 aaPredicted RBP22.08■■□□□ 1.13
HDAC6-224ENST00000481929 PLSCR1O15162 318 aa22.06■■□□□ 1.12
HDAC6-224ENST00000481929 ANO8Q9HCE9 1232 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-224ENST00000481929 POLR3AO14802 1390 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-224ENST00000481929 CASZ1Q86V15 1759 aa22.06■■□□□ 1.12
HDAC6-224ENST00000481929 ABTB2Q8N961 1025 aa22.05■■□□□ 1.12
HDAC6-224ENST00000481929 USP19O94966 1318 aa22.05■■□□□ 1.12
HDAC6-224ENST00000481929 ACEP12821 1306 aa22.05■■□□□ 1.12
HDAC6-224ENST00000481929 COL5A2P05997 1499 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-224ENST00000481929 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
HDAC6-224ENST00000481929 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
HDAC6-224ENST00000481929 ARHGEF28Q8N1W1 1705 aaKnown RBP22.03■■□□□ 1.12
HDAC6-224ENST00000481929 SENP3-EIF4A1A0A087X0R7 540 aa22.02■■□□□ 1.12
HDAC6-224ENST00000481929 ZBTB7AO95365 584 aa22.02■■□□□ 1.12
HDAC6-224ENST00000481929 CDK19Q9BWU1 502 aa22.02■■□□□ 1.12
HDAC6-224ENST00000481929 BCL11BQ9C0K0 894 aaPredicted RBP22.02■■□□□ 1.12
HDAC6-224ENST00000481929 CRB1P82279 1406 aa22.02■■□□□ 1.12
HDAC6-224ENST00000481929 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
HDAC6-224ENST00000481929 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
HDAC6-224ENST00000481929 CCDC61Q9Y6R9 512 aa22.01■■□□□ 1.11
HDAC6-224ENST00000481929 MYOM1P52179 1685 aa22.01■■□□□ 1.11
HDAC6-224ENST00000481929 NLRP13Q86W25 1043 aa22■■□□□ 1.11
HDAC6-224ENST00000481929 PDGFDQ9GZP0 370 aaPredicted RBP22■■□□□ 1.11
HDAC6-224ENST00000481929 GCP02774 474 aa21.99■■□□□ 1.11
HDAC6-224ENST00000481929 PTGER2P43116 358 aa21.99■■□□□ 1.11
HDAC6-224ENST00000481929 DDB1Q16531 1140 aa21.99■■□□□ 1.11
HDAC6-224ENST00000481929 SBF2Q86WG5 1849 aa21.99■■□□□ 1.11
HDAC6-224ENST00000481929 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
HDAC6-224ENST00000481929 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
HDAC6-224ENST00000481929 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
HDAC6-224ENST00000481929 ATF5Q9Y2D1 282 aaPredicted RBP21.97■■□□□ 1.11
HDAC6-224ENST00000481929 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
HDAC6-224ENST00000481929 C1QTNF8P60827 252 aa21.95■■□□□ 1.1
HDAC6-224ENST00000481929 PTF1AQ7RTS3 328 aa21.95■■□□□ 1.1
HDAC6-224ENST00000481929 SYT17Q9BSW7 474 aa21.95■■□□□ 1.1
HDAC6-224ENST00000481929 FHDC1Q9C0D6 1143 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-224ENST00000481929 STK32BQ9NY57 414 aa21.95■■□□□ 1.1
HDAC6-224ENST00000481929 PROM2Q8N271 834 aa21.94■■□□□ 1.1
HDAC6-224ENST00000481929 TOM1L2Q6ZVM7 507 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms