RNA–Protein interactions for RNA: ENST00000481639.1

PHC3-208, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-208ENST00000481639 POTECB2RU33 542 aa10.09□□□□□ -0.79
PHC3-208ENST00000481639 J3QL48 77 aa10.09□□□□□ -0.79
PHC3-208ENST00000481639 KCNH2Q12809 1159 aa10.09□□□□□ -0.79
PHC3-208ENST00000481639 CTC1Q2NKJ3 1217 aa10.09□□□□□ -0.79
PHC3-208ENST00000481639 UNC93B1Q9H1C4 597 aa10.09□□□□□ -0.79
PHC3-208ENST00000481639 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
PHC3-208ENST00000481639 LYPD8Q6UX82 237 aa10.08□□□□□ -0.8
PHC3-208ENST00000481639 CABLES1Q8TDN4 633 aa10.08□□□□□ -0.8
PHC3-208ENST00000481639 LIMD1Q9UGP4 676 aa10.08□□□□□ -0.8
PHC3-208ENST00000481639 SH3BP2P78314 561 aa10.07□□□□□ -0.8
PHC3-208ENST00000481639 CSPP1Q1MSJ5 1256 aa10.07□□□□□ -0.8
PHC3-208ENST00000481639 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
PHC3-208ENST00000481639 HMGXB3Q12766 1538 aa10.07□□□□□ -0.8
PHC3-208ENST00000481639 AXIN1O15169 862 aa10.06□□□□□ -0.8
PHC3-208ENST00000481639 DACH1Q9UI36 760 aa10.06□□□□□ -0.8
PHC3-208ENST00000481639 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
PHC3-208ENST00000481639 SIAH2O43255 324 aa10.05□□□□□ -0.8
PHC3-208ENST00000481639 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
PHC3-208ENST00000481639 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
PHC3-208ENST00000481639 LILRB3O75022 631 aa10.04□□□□□ -0.8
PHC3-208ENST00000481639 QPCTQ16769 361 aa10.04□□□□□ -0.8
PHC3-208ENST00000481639 EHBP1Q8NDI1 1231 aa10.04□□□□□ -0.8
PHC3-208ENST00000481639 BAP1Q92560 729 aa10.04□□□□□ -0.8
PHC3-208ENST00000481639 HPS1Q92902 700 aa10.03□□□□□ -0.8
PHC3-208ENST00000481639 ZNF775Q96BV0 537 aaPredicted RBP10.03□□□□□ -0.8
PHC3-208ENST00000481639 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.81
PHC3-208ENST00000481639 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.81
PHC3-208ENST00000481639 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
PHC3-208ENST00000481639 CTHP32929 405 aa10.02□□□□□ -0.81
PHC3-208ENST00000481639 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
PHC3-208ENST00000481639 LINC01559Q495D7 138 aa10.02□□□□□ -0.81
PHC3-208ENST00000481639 NUTM2DQ5VT03 806 aaPredicted RBP10.02□□□□□ -0.81
PHC3-208ENST00000481639 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
PHC3-208ENST00000481639 ZNF511Q8NB15 262 aa10.02□□□□□ -0.81
PHC3-208ENST00000481639 RSPH6AQ9H0K4 717 aa10.02□□□□□ -0.81
PHC3-208ENST00000481639 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
PHC3-208ENST00000481639 PER1O15534 1290 aaPredicted RBP10□□□□□ -0.81
PHC3-208ENST00000481639 MAP10Q9P2G4 905 aa10□□□□□ -0.81
PHC3-208ENST00000481639 KDM4CQ9H3R0 1056 aa9.99□□□□□ -0.81
PHC3-208ENST00000481639 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
PHC3-208ENST00000481639 POLR3EQ9NVU0 708 aa9.99□□□□□ -0.81
PHC3-208ENST00000481639 GMPR2Q9P2T1 348 aaKnown RBP9.99□□□□□ -0.81
PHC3-208ENST00000481639 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
PHC3-208ENST00000481639 TSC1Q92574 1164 aa9.98□□□□□ -0.81
PHC3-208ENST00000481639 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
PHC3-208ENST00000481639 ATP13A2Q9NQ11 1180 aa9.96□□□□□ -0.82
PHC3-208ENST00000481639 WASF2Q9Y6W5 498 aa9.96□□□□□ -0.82
PHC3-208ENST00000481639 MPNDQ8N594 471 aa9.95□□□□□ -0.82
PHC3-208ENST00000481639 FAM117AQ9C073 453 aa9.95□□□□□ -0.82
PHC3-208ENST00000481639 TLL2Q9Y6L7 1015 aa9.95□□□□□ -0.82
PHC3-208ENST00000481639 CUX2O14529 1486 aa9.94□□□□□ -0.82
PHC3-208ENST00000481639 HELBQ8NG08 1087 aaPredicted RBP9.94□□□□□ -0.82
PHC3-208ENST00000481639 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
PHC3-208ENST00000481639 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
PHC3-208ENST00000481639 SKIV2LQ15477 1246 aaKnown RBP9.93□□□□□ -0.82
PHC3-208ENST00000481639 SH3D19Q5HYK7 790 aa9.93□□□□□ -0.82
PHC3-208ENST00000481639 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
PHC3-208ENST00000481639 PLEKHG3A1L390 1219 aa9.92□□□□□ -0.82
PHC3-208ENST00000481639 FAM174AQ8TBP5 190 aa9.91□□□□□ -0.82
PHC3-208ENST00000481639 FBXO31Q5XUX0 539 aaPredicted RBP9.9□□□□□ -0.82
PHC3-208ENST00000481639 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.9□□□□□ -0.82
PHC3-208ENST00000481639 SENP2Q9HC62 589 aa9.9□□□□□ -0.82
PHC3-208ENST00000481639 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
PHC3-208ENST00000481639 PROCA1Q8NCQ7 364 aaPredicted RBP9.89□□□□□ -0.83
PHC3-208ENST00000481639 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
PHC3-208ENST00000481639 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
PHC3-208ENST00000481639 CAPN5O15484 640 aaPredicted RBP9.88□□□□□ -0.83
PHC3-208ENST00000481639 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
PHC3-208ENST00000481639 NNTQ13423 1086 aa9.88□□□□□ -0.83
PHC3-208ENST00000481639 BPHLQ86WA6 291 aaPredicted RBP9.88□□□□□ -0.83
PHC3-208ENST00000481639 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
PHC3-208ENST00000481639 SNRPBP14678 240 aaKnown RBP9.87□□□□□ -0.83
PHC3-208ENST00000481639 AGERQ15109 404 aa9.87□□□□□ -0.83
PHC3-208ENST00000481639 ADH1CP00326 375 aa9.86□□□□□ -0.83
PHC3-208ENST00000481639 PRDM2Q13029 1718 aa9.86□□□□□ -0.83
PHC3-208ENST00000481639 NBPF14Q5TI25 921 aa9.86□□□□□ -0.83
PHC3-208ENST00000481639 PPP2R2DQ66LE6 453 aa9.86□□□□□ -0.83
PHC3-208ENST00000481639 SH3RF1Q7Z6J0 888 aa9.86□□□□□ -0.83
PHC3-208ENST00000481639 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
PHC3-208ENST00000481639 ABCC8Q09428 1581 aa9.85□□□□□ -0.83
PHC3-208ENST00000481639 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
PHC3-208ENST00000481639 BMP1P13497 986 aa9.84□□□□□ -0.83
PHC3-208ENST00000481639 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
PHC3-208ENST00000481639 SH3BP5LQ7L8J4 393 aa9.84□□□□□ -0.83
PHC3-208ENST00000481639 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
PHC3-208ENST00000481639 LRRN4Q8WUT4 740 aa9.84□□□□□ -0.83
PHC3-208ENST00000481639 ARID5BQ14865 1188 aa9.83□□□□□ -0.84
PHC3-208ENST00000481639 C1QTNF2Q9BXJ5 285 aa9.83□□□□□ -0.84
PHC3-208ENST00000481639 ATP1B4Q9UN42 357 aaPredicted RBP9.83□□□□□ -0.84
PHC3-208ENST00000481639 CFTRP13569 1480 aa9.83□□□□□ -0.84
PHC3-208ENST00000481639 GRM5P41594 1212 aa9.82□□□□□ -0.84
PHC3-208ENST00000481639 GPKOWQ92917 476 aaPredicted RBP eCLIP9.82□□□□□ -0.84
PHC3-208ENST00000481639 KLF16Q9BXK1 252 aaPredicted RBP9.82□□□□□ -0.84
PHC3-208ENST00000481639 TIMP2P16035 220 aa9.81□□□□□ -0.84
PHC3-208ENST00000481639 WDR4P57081 412 aaKnown RBP9.81□□□□□ -0.84
PHC3-208ENST00000481639 NR5A1Q13285 461 aa9.81□□□□□ -0.84
PHC3-208ENST00000481639 ERCC6Q03468 1493 aa9.8□□□□□ -0.84
PHC3-208ENST00000481639 MAGEB6P1A0A0J9YX57 407 aa9.79□□□□□ -0.84
PHC3-208ENST00000481639 NR3C2P08235 984 aa9.79□□□□□ -0.84
PHC3-208ENST00000481639 TRMT44Q8IYL2 757 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms