RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 DISP2A7MBM2 1401 aa25.83■■□□□ 1.73
RXRB-203ENST00000481441 FAM182BQ5T319 152 aa25.83■■□□□ 1.73
RXRB-203ENST00000481441 GPRASP1Q5JY77 1395 aa25.81■■□□□ 1.72
RXRB-203ENST00000481441 ADGRB1O14514 1584 aa25.81■■□□□ 1.72
RXRB-203ENST00000481441 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
RXRB-203ENST00000481441 PRR36Q9H6K5 1346 aa25.8■■□□□ 1.72
RXRB-203ENST00000481441 R3HDM1Q15032 1099 aaKnown RBP25.79■■□□□ 1.72
RXRB-203ENST00000481441 HIRIP3Q9BW71 556 aaPredicted RBP25.78■■□□□ 1.72
RXRB-203ENST00000481441 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
RXRB-203ENST00000481441 EIF3AQ14152 1382 aaKnown RBP25.76■■□□□ 1.71
RXRB-203ENST00000481441 MINK1Q8N4C8 1332 aaPredicted RBP25.74■■□□□ 1.71
RXRB-203ENST00000481441 TRAK1Q9UPV9 953 aa25.74■■□□□ 1.71
RXRB-203ENST00000481441 EZH2Q15910 746 aaKnown RBP25.73■■□□□ 1.71
RXRB-203ENST00000481441 PRDM11Q9NQV5 511 aa25.73■■□□□ 1.71
RXRB-203ENST00000481441 SPATA31A1Q5TZJ5 1347 aa25.71■■□□□ 1.71
RXRB-203ENST00000481441 WASLO00401 505 aaPredicted RBP25.71■■□□□ 1.71
RXRB-203ENST00000481441 CAMKK2Q96RR4 588 aa25.71■■□□□ 1.71
RXRB-203ENST00000481441 NGDNQ8NEJ9 315 aaKnown RBP25.7■■□□□ 1.71
RXRB-203ENST00000481441 PAK3O75914 559 aaPredicted RBP25.69■■□□□ 1.7
RXRB-203ENST00000481441 PHRF1Q9P1Y6 1649 aaKnown RBP25.69■■□□□ 1.7
RXRB-203ENST00000481441 FAM196AQ6ZSG2 479 aa25.68■■□□□ 1.7
RXRB-203ENST00000481441 KIAA0232Q92628 1395 aa25.68■■□□□ 1.7
RXRB-203ENST00000481441 TRIM37O94972 964 aa25.67■■□□□ 1.7
RXRB-203ENST00000481441 ITSN1Q15811 1721 aa25.67■■□□□ 1.7
RXRB-203ENST00000481441 CHRNA2Q15822 529 aa25.65■■□□□ 1.7
RXRB-203ENST00000481441 PARD3Q8TEW0 1356 aa25.65■■□□□ 1.7
RXRB-203ENST00000481441 RREB1Q92766 1687 aa25.65■■□□□ 1.7
RXRB-203ENST00000481441 ATP7BP35670 1465 aa25.64■■□□□ 1.7
RXRB-203ENST00000481441 APBA3O96018 575 aa25.63■■□□□ 1.69
RXRB-203ENST00000481441 STRN4Q9NRL3 753 aa25.63■■□□□ 1.69
RXRB-203ENST00000481441 ARHGEF28Q8N1W1 1705 aaKnown RBP25.62■■□□□ 1.69
RXRB-203ENST00000481441 NUP188Q5SRE5 1749 aa25.61■■□□□ 1.69
RXRB-203ENST00000481441 ZC3H6P61129 1189 aaKnown RBP25.6■■□□□ 1.69
RXRB-203ENST00000481441 NUDT16Q96DE0 195 aaKnown RBP25.6■■□□□ 1.69
RXRB-203ENST00000481441 KDM2AQ9Y2K7 1162 aa25.6■■□□□ 1.69
RXRB-203ENST00000481441 BARGINQ6ZT62 677 aa25.59■■□□□ 1.69
RXRB-203ENST00000481441 SSH2Q76I76 1423 aa25.58■■□□□ 1.69
RXRB-203ENST00000481441 DCAF11Q8TEB1 546 aa25.58■■□□□ 1.69
RXRB-203ENST00000481441 USP35Q9P2H5 1018 aa25.57■■□□□ 1.68
RXRB-203ENST00000481441 PDE3BQ13370 1112 aa25.56■■□□□ 1.68
RXRB-203ENST00000481441 NUTM2GQ5VZR2 741 aa25.56■■□□□ 1.68
RXRB-203ENST00000481441 TOPAZ1Q8N9V7 1692 aa25.56■■□□□ 1.68
RXRB-203ENST00000481441 CAMTA1Q9Y6Y1 1673 aa25.56■■□□□ 1.68
RXRB-203ENST00000481441 NRKQ7Z2Y5 1582 aa25.55■■□□□ 1.68
RXRB-203ENST00000481441 POLR3AO14802 1390 aaPredicted RBP25.55■■□□□ 1.68
RXRB-203ENST00000481441 LMO7Q8WWI1 1683 aa25.54■■□□□ 1.68
RXRB-203ENST00000481441 EVA1CP58658 441 aa25.53■■□□□ 1.68
RXRB-203ENST00000481441 STAC3Q96MF2 364 aa25.53■■□□□ 1.68
RXRB-203ENST00000481441 LARP1Q6PKG0 1096 aaKnown RBP25.52■■□□□ 1.68
RXRB-203ENST00000481441 RAB3GAP2Q9H2M9 1393 aa25.52■■□□□ 1.68
RXRB-203ENST00000481441 ACEP12821 1306 aa25.51■■□□□ 1.67
RXRB-203ENST00000481441 NBPF8Q3BBV2 869 aa25.51■■□□□ 1.67
RXRB-203ENST00000481441 NBPF14Q5TI25 921 aa25.51■■□□□ 1.67
RXRB-203ENST00000481441 CDK19Q9BWU1 502 aa25.51■■□□□ 1.67
RXRB-203ENST00000481441 CPDO75976 1380 aa25.5■■□□□ 1.67
RXRB-203ENST00000481441 TCP11L2Q8N4U5 519 aa25.5■■□□□ 1.67
RXRB-203ENST00000481441 PARP4Q9UKK3 1724 aaKnown RBP25.49■■□□□ 1.67
RXRB-203ENST00000481441 YY1P25490 414 aa25.49■■□□□ 1.67
RXRB-203ENST00000481441 USP19O94966 1318 aa25.47■■□□□ 1.67
RXRB-203ENST00000481441 PLEKHG3A1L390 1219 aa25.47■■□□□ 1.67
RXRB-203ENST00000481441 CCDC61Q9Y6R9 512 aa25.47■■□□□ 1.67
RXRB-203ENST00000481441 THRAP3Q9Y2W1 955 aaKnown RBP25.46■■□□□ 1.67
RXRB-203ENST00000481441 ABTB2Q8N961 1025 aa25.45■■□□□ 1.66
RXRB-203ENST00000481441 SPON1Q9HCB6 807 aa25.45■■□□□ 1.66
RXRB-203ENST00000481441 PEAK1Q9H792 1746 aa25.43■■□□□ 1.66
RXRB-203ENST00000481441 COL5A2P05997 1499 aaPredicted RBP25.43■■□□□ 1.66
RXRB-203ENST00000481441 KCNQ2O43526 872 aa25.42■■□□□ 1.66
RXRB-203ENST00000481441 RGPD3A6NKT7 1758 aaPredicted RBP25.42■■□□□ 1.66
RXRB-203ENST00000481441 RGPD4Q7Z3J3 1758 aa25.42■■□□□ 1.66
RXRB-203ENST00000481441 SBF2Q86WG5 1849 aa25.41■■□□□ 1.66
RXRB-203ENST00000481441 GCP02774 474 aa25.4■■□□□ 1.66
RXRB-203ENST00000481441 PPP1R1BQ9UD71 204 aaPredicted RBP25.4■■□□□ 1.66
RXRB-203ENST00000481441 NINLQ9Y2I6 1382 aa25.4■■□□□ 1.66
RXRB-203ENST00000481441 C11orf95C9JLR9 678 aaPredicted RBP25.39■■□□□ 1.66
RXRB-203ENST00000481441 NLRP13Q86W25 1043 aa25.38■■□□□ 1.65
RXRB-203ENST00000481441 KIAA1210Q9ULL0 1709 aa25.38■■□□□ 1.65
RXRB-203ENST00000481441 OVOS2A0A0G2JMS6 1433 aa25.38■■□□□ 1.65
RXRB-203ENST00000481441 OVOS2A0A0J9YW53 1432 aa25.38■■□□□ 1.65
RXRB-203ENST00000481441 CRB1P82279 1406 aa25.38■■□□□ 1.65
RXRB-203ENST00000481441 OVOS2Q6IE36 1432 aa25.38■■□□□ 1.65
RXRB-203ENST00000481441 LRRC37A3O60309 1634 aa25.37■■□□□ 1.65
RXRB-203ENST00000481441 CASZ1Q86V15 1759 aa25.35■■□□□ 1.65
RXRB-203ENST00000481441 PLSCR1O15162 318 aa25.35■■□□□ 1.65
RXRB-203ENST00000481441 PPIP5K1Q6PFW1 1433 aa25.34■■□□□ 1.65
RXRB-203ENST00000481441 DCAF8L1A6NGE4 600 aa25.33■■□□□ 1.64
RXRB-203ENST00000481441 ANO8Q9HCE9 1232 aaPredicted RBP25.33■■□□□ 1.64
RXRB-203ENST00000481441 BRD4O60885 1362 aaPredicted RBP25.32■■□□□ 1.64
RXRB-203ENST00000481441 AATKQ6ZMQ8 1374 aa25.31■■□□□ 1.64
RXRB-203ENST00000481441 SLIT3O75094 1523 aa25.31■■□□□ 1.64
RXRB-203ENST00000481441 COL18A1P39060 1754 aa25.31■■□□□ 1.64
RXRB-203ENST00000481441 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
RXRB-203ENST00000481441 PTF1AQ7RTS3 328 aa25.3■■□□□ 1.64
RXRB-203ENST00000481441 SRPK2P78362 688 aaKnown RBP25.29■■□□□ 1.64
RXRB-203ENST00000481441 DDB1Q16531 1140 aa25.29■■□□□ 1.64
RXRB-203ENST00000481441 NBPF1Q3BBV0 1214 aa25.28■■□□□ 1.64
RXRB-203ENST00000481441 BCL11BQ9C0K0 894 aaPredicted RBP25.28■■□□□ 1.64
RXRB-203ENST00000481441 USP6P35125 1406 aa25.27■■□□□ 1.64
RXRB-203ENST00000481441 ZBTB7CA1YPR0 619 aa25.27■■□□□ 1.64
RXRB-203ENST00000481441 PDGFDQ9GZP0 370 aaPredicted RBP25.27■■□□□ 1.64
RXRB-203ENST00000481441 CABP2Q9NPB3 220 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms