RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 NUTM2AQ8IVF1 878 aaPredicted RBP15.08■□□□□ 0
ATG4B-219ENST00000479941 LRP6O75581 1613 aa15.07■□□□□ 0
ATG4B-219ENST00000479941 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
ATG4B-219ENST00000479941 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
ATG4B-219ENST00000479941 ALS2Q96Q42 1657 aa15.06■□□□□ 0
ATG4B-219ENST00000479941 MEX3CQ5U5Q3 659 aaKnown RBP15.06■□□□□ 0
ATG4B-219ENST00000479941 ABTB2Q8N961 1025 aa15.06■□□□□ 0
ATG4B-219ENST00000479941 SSH2Q76I76 1423 aa15.06■□□□□ 0
ATG4B-219ENST00000479941 CD163L1Q9NR16 1453 aa15.06■□□□□ 0
ATG4B-219ENST00000479941 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
ATG4B-219ENST00000479941 TTC21BQ7Z4L5 1316 aa15.05■□□□□ -0
ATG4B-219ENST00000479941 A0A1W2PP64 1363 aa15.05■□□□□ -0
ATG4B-219ENST00000479941 AKAP12Q02952 1782 aa15.05■□□□□ -0
ATG4B-219ENST00000479941 TTC21AQ8NDW8 1320 aa15.04■□□□□ -0
ATG4B-219ENST00000479941 HAP1P54257 671 aaPredicted RBP15.04■□□□□ -0
ATG4B-219ENST00000479941 ANKRD36BQ8N2N9 1353 aa15.03■□□□□ -0
ATG4B-219ENST00000479941 ADAMTS2O95450 1211 aa15.03■□□□□ -0
ATG4B-219ENST00000479941 NLRP13Q86W25 1043 aa15.03■□□□□ -0
ATG4B-219ENST00000479941 CABLES1Q8TDN4 633 aa15.03■□□□□ -0
ATG4B-219ENST00000479941 EDC4Q6P2E9 1401 aaKnown RBP15.02■□□□□ -0
ATG4B-219ENST00000479941 POLR3GLQ9BT43 218 aa15.02■□□□□ -0
ATG4B-219ENST00000479941 MON2Q7Z3U7 1717 aa15.02□□□□□ -0.01
ATG4B-219ENST00000479941 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-219ENST00000479941 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
ATG4B-219ENST00000479941 NLRP6P59044 892 aa15.01□□□□□ -0.01
ATG4B-219ENST00000479941 NUTM2GQ5VZR2 741 aa15.01□□□□□ -0.01
ATG4B-219ENST00000479941 C8orf37Q96NL8 207 aa15.01□□□□□ -0.01
ATG4B-219ENST00000479941 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
ATG4B-219ENST00000479941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
ATG4B-219ENST00000479941 NGLY1Q96IV0 654 aa15□□□□□ -0.01
ATG4B-219ENST00000479941 USP19O94966 1318 aa14.99□□□□□ -0.01
ATG4B-219ENST00000479941 KIF7Q2M1P5 1343 aa14.98□□□□□ -0.01
ATG4B-219ENST00000479941 ZNF772Q68DY9 489 aaPredicted RBP14.98□□□□□ -0.01
ATG4B-219ENST00000479941 USP31Q70CQ4 1352 aa14.98□□□□□ -0.01
ATG4B-219ENST00000479941 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
ATG4B-219ENST00000479941 AFF2P51816 1311 aa14.97□□□□□ -0.01
ATG4B-219ENST00000479941 PIK3C2AO00443 1686 aa14.97□□□□□ -0.01
ATG4B-219ENST00000479941 MYOM1P52179 1685 aa14.97□□□□□ -0.01
ATG4B-219ENST00000479941 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
ATG4B-219ENST00000479941 RGS17Q9UGC6 210 aaPredicted RBP14.97□□□□□ -0.01
ATG4B-219ENST00000479941 CRYBG1Q9Y4K1 1723 aa14.97□□□□□ -0.01
ATG4B-219ENST00000479941 GCP02774 474 aa14.96□□□□□ -0.01
ATG4B-219ENST00000479941 NME9Q86XW9 330 aa14.96□□□□□ -0.01
ATG4B-219ENST00000479941 KCNH5Q8NCM2 988 aa14.96□□□□□ -0.01
ATG4B-219ENST00000479941 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
ATG4B-219ENST00000479941 PHRF1Q9P1Y6 1649 aaKnown RBP14.95□□□□□ -0.02
ATG4B-219ENST00000479941 SLIT3O75094 1523 aa14.94□□□□□ -0.02
ATG4B-219ENST00000479941 CARD14Q9BXL6 1004 aa14.94□□□□□ -0.02
ATG4B-219ENST00000479941 PRDM11Q9NQV5 511 aa14.94□□□□□ -0.02
ATG4B-219ENST00000479941 USP21Q9UK80 565 aa14.94□□□□□ -0.02
ATG4B-219ENST00000479941 FAM83GA6ND36 823 aa14.93□□□□□ -0.02
ATG4B-219ENST00000479941 ZC3H6P61129 1189 aaKnown RBP14.93□□□□□ -0.02
ATG4B-219ENST00000479941 COG3Q96JB2 828 aa14.93□□□□□ -0.02
ATG4B-219ENST00000479941 PANK3Q9H999 370 aa14.93□□□□□ -0.02
ATG4B-219ENST00000479941 CPDO75976 1380 aa14.93□□□□□ -0.02
ATG4B-219ENST00000479941 KIAA0232Q92628 1395 aa14.93□□□□□ -0.02
ATG4B-219ENST00000479941 CCDC7Q96M83 1385 aa14.93□□□□□ -0.02
ATG4B-219ENST00000479941 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
ATG4B-219ENST00000479941 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
ATG4B-219ENST00000479941 SLIT2O94813 1529 aa14.92□□□□□ -0.02
ATG4B-219ENST00000479941 FYB1O15117 783 aa14.92□□□□□ -0.02
ATG4B-219ENST00000479941 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
ATG4B-219ENST00000479941 OVOS2A0A0J9YW53 1432 aa14.92□□□□□ -0.02
ATG4B-219ENST00000479941 OVOS2Q6IE36 1432 aa14.92□□□□□ -0.02
ATG4B-219ENST00000479941 USP54Q70EL1 1684 aa14.91□□□□□ -0.02
ATG4B-219ENST00000479941 BCL9LQ86UU0 1499 aa14.91□□□□□ -0.02
ATG4B-219ENST00000479941 POTEAQ6S8J7 498 aa14.91□□□□□ -0.02
ATG4B-219ENST00000479941 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
ATG4B-219ENST00000479941 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
ATG4B-219ENST00000479941 COL14A1Q05707 1796 aaKnown RBP14.9□□□□□ -0.02
ATG4B-219ENST00000479941 QTRT2Q9H974 415 aaKnown RBP14.9□□□□□ -0.02
ATG4B-219ENST00000479941 BTG4Q9NY30 223 aa14.9□□□□□ -0.02
ATG4B-219ENST00000479941 TRPC5Q9UL62 973 aaPredicted RBP14.9□□□□□ -0.02
ATG4B-219ENST00000479941 CHRNA2Q15822 529 aa14.89□□□□□ -0.03
ATG4B-219ENST00000479941 GGNBP2Q9H3C7 697 aa14.89□□□□□ -0.03
ATG4B-219ENST00000479941 SOX12O15370 315 aa14.88□□□□□ -0.03
ATG4B-219ENST00000479941 ARHGEF25Q86VW2 580 aa14.88□□□□□ -0.03
ATG4B-219ENST00000479941 NWD2Q9ULI1 1742 aa14.88□□□□□ -0.03
ATG4B-219ENST00000479941 PLCH1Q4KWH8 1693 aa14.87□□□□□ -0.03
ATG4B-219ENST00000479941 AATKQ6ZMQ8 1374 aa14.87□□□□□ -0.03
ATG4B-219ENST00000479941 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
ATG4B-219ENST00000479941 NFAT5O94916 1531 aa14.87□□□□□ -0.03
ATG4B-219ENST00000479941 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.86□□□□□ -0.03
ATG4B-219ENST00000479941 ATRNO75882 1429 aa14.86□□□□□ -0.03
ATG4B-219ENST00000479941 ZBTB7CA1YPR0 619 aa14.86□□□□□ -0.03
ATG4B-219ENST00000479941 RXRBP28702 533 aa14.86□□□□□ -0.03
ATG4B-219ENST00000479941 RBM6P78332 1123 aaKnown RBP14.86□□□□□ -0.03
ATG4B-219ENST00000479941 KIF20BQ96Q89 1820 aa14.85□□□□□ -0.03
ATG4B-219ENST00000479941 VPS72Q15906 364 aa14.85□□□□□ -0.03
ATG4B-219ENST00000479941 NSD2O96028 1365 aa14.85□□□□□ -0.03
ATG4B-219ENST00000479941 GJD4Q96KN9 370 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-219ENST00000479941 LMO7Q8WWI1 1683 aa14.84□□□□□ -0.03
ATG4B-219ENST00000479941 PER1O15534 1290 aaPredicted RBP14.83□□□□□ -0.04
ATG4B-219ENST00000479941 EVA1CP58658 441 aa14.83□□□□□ -0.04
ATG4B-219ENST00000479941 CAMTA1Q9Y6Y1 1673 aa14.83□□□□□ -0.04
ATG4B-219ENST00000479941 ABCC6O95255 1503 aa14.82□□□□□ -0.04
ATG4B-219ENST00000479941 ILDR2Q71H61 639 aa14.82□□□□□ -0.04
ATG4B-219ENST00000479941 STRN4Q9NRL3 753 aa14.82□□□□□ -0.04
ATG4B-219ENST00000479941 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
ATG4B-219ENST00000479941 CCDC9Q9Y3X0 531 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms