RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 SPATA31A5Q5VU36 1347 aa19.47■□□□□ 0.71
ABCF1-206ENST00000479542 SPATA31A7Q8IWB4 1347 aa19.47■□□□□ 0.71
ABCF1-206ENST00000479542 DEFB132Q7Z7B7 95 aa19.46■□□□□ 0.71
ABCF1-206ENST00000479542 NUDT16Q96DE0 195 aaKnown RBP19.45■□□□□ 0.7
ABCF1-206ENST00000479542 BAG6P46379 1132 aa19.44■□□□□ 0.7
ABCF1-206ENST00000479542 ATP7BP35670 1465 aa19.43■□□□□ 0.7
ABCF1-206ENST00000479542 FAM98CQ17RN3 349 aaKnown RBP19.43■□□□□ 0.7
ABCF1-206ENST00000479542 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
ABCF1-206ENST00000479542 CRYBG1Q9Y4K1 1723 aa19.42■□□□□ 0.7
ABCF1-206ENST00000479542 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
ABCF1-206ENST00000479542 PRDM11Q9NQV5 511 aa19.41■□□□□ 0.7
ABCF1-206ENST00000479542 CCDC61Q9Y6R9 512 aa19.41■□□□□ 0.7
ABCF1-206ENST00000479542 ITSN1Q15811 1721 aa19.41■□□□□ 0.7
ABCF1-206ENST00000479542 DISP2A7MBM2 1401 aa19.41■□□□□ 0.7
ABCF1-206ENST00000479542 ARHGEF28Q8N1W1 1705 aaKnown RBP19.4■□□□□ 0.7
ABCF1-206ENST00000479542 PAK3O75914 559 aaPredicted RBP19.39■□□□□ 0.69
ABCF1-206ENST00000479542 CDK19Q9BWU1 502 aa19.39■□□□□ 0.69
ABCF1-206ENST00000479542 KIAA1210Q9ULL0 1709 aa19.39■□□□□ 0.69
ABCF1-206ENST00000479542 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
ABCF1-206ENST00000479542 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
ABCF1-206ENST00000479542 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
ABCF1-206ENST00000479542 SPATA31A1Q5TZJ5 1347 aa19.38■□□□□ 0.69
ABCF1-206ENST00000479542 THSD7AQ9UPZ6 1657 aa19.38■□□□□ 0.69
ABCF1-206ENST00000479542 LRP5O75197 1615 aa19.36■□□□□ 0.69
ABCF1-206ENST00000479542 ACEP12821 1306 aa19.36■□□□□ 0.69
ABCF1-206ENST00000479542 A0A0G2JS52 829 aa19.36■□□□□ 0.69
ABCF1-206ENST00000479542 MYT1Q01538 1121 aa19.36■□□□□ 0.69
ABCF1-206ENST00000479542 KIAA0232Q92628 1395 aa19.35■□□□□ 0.69
ABCF1-206ENST00000479542 BARGINQ6ZT62 677 aa19.35■□□□□ 0.69
ABCF1-206ENST00000479542 RGPD1P0DJD0 1748 aa19.34■□□□□ 0.69
ABCF1-206ENST00000479542 CPDO75976 1380 aa19.34■□□□□ 0.69
ABCF1-206ENST00000479542 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
ABCF1-206ENST00000479542 TOPAZ1Q8N9V7 1692 aa19.32■□□□□ 0.68
ABCF1-206ENST00000479542 PARD3Q8TEW0 1356 aa19.32■□□□□ 0.68
ABCF1-206ENST00000479542 USP19O94966 1318 aa19.31■□□□□ 0.68
ABCF1-206ENST00000479542 C11orf95C9JLR9 678 aaPredicted RBP19.31■□□□□ 0.68
ABCF1-206ENST00000479542 THRAP3Q9Y2W1 955 aaKnown RBP19.31■□□□□ 0.68
ABCF1-206ENST00000479542 PHRF1Q9P1Y6 1649 aaKnown RBP19.31■□□□□ 0.68
ABCF1-206ENST00000479542 EN1Q05925 392 aaPredicted RBP19.3■□□□□ 0.68
ABCF1-206ENST00000479542 NLRP13Q86W25 1043 aa19.3■□□□□ 0.68
ABCF1-206ENST00000479542 ZC3H6P61129 1189 aaKnown RBP19.29■□□□□ 0.68
ABCF1-206ENST00000479542 ABTB2Q8N961 1025 aa19.29■□□□□ 0.68
ABCF1-206ENST00000479542 CAMKK2Q96RR4 588 aa19.29■□□□□ 0.68
ABCF1-206ENST00000479542 SSH2Q76I76 1423 aa19.28■□□□□ 0.68
ABCF1-206ENST00000479542 CHRNA2Q15822 529 aa19.28■□□□□ 0.68
ABCF1-206ENST00000479542 GCP02774 474 aa19.27■□□□□ 0.68
ABCF1-206ENST00000479542 EVA1CP58658 441 aa19.27■□□□□ 0.68
ABCF1-206ENST00000479542 NBPF1Q3BBV0 1214 aa19.27■□□□□ 0.68
ABCF1-206ENST00000479542 CENPJQ9HC77 1338 aaPredicted RBP19.26■□□□□ 0.67
ABCF1-206ENST00000479542 FAM182BQ5T319 152 aa19.26■□□□□ 0.67
ABCF1-206ENST00000479542 TCP11L2Q8N4U5 519 aa19.26■□□□□ 0.67
ABCF1-206ENST00000479542 STRN4Q9NRL3 753 aa19.26■□□□□ 0.67
ABCF1-206ENST00000479542 CAMTA1Q9Y6Y1 1673 aa19.26■□□□□ 0.67
ABCF1-206ENST00000479542 TNS1Q9HBL0 1735 aaKnown RBP19.25■□□□□ 0.67
ABCF1-206ENST00000479542 LMO7Q8WWI1 1683 aa19.25■□□□□ 0.67
ABCF1-206ENST00000479542 PDE3BQ13370 1112 aa19.25■□□□□ 0.67
ABCF1-206ENST00000479542 NRKQ7Z2Y5 1582 aa19.24■□□□□ 0.67
ABCF1-206ENST00000479542 PSDA5PKW4 1024 aaPredicted RBP19.23■□□□□ 0.67
ABCF1-206ENST00000479542 TRIM37O94972 964 aa19.23■□□□□ 0.67
ABCF1-206ENST00000479542 EZH2Q15910 746 aaKnown RBP19.23■□□□□ 0.67
ABCF1-206ENST00000479542 NUTM2GQ5VZR2 741 aa19.23■□□□□ 0.67
ABCF1-206ENST00000479542 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
ABCF1-206ENST00000479542 SRPK2P78362 688 aaKnown RBP19.22■□□□□ 0.67
ABCF1-206ENST00000479542 LARP1Q6PKG0 1096 aaKnown RBP19.22■□□□□ 0.67
ABCF1-206ENST00000479542 APBA3O96018 575 aa19.21■□□□□ 0.67
ABCF1-206ENST00000479542 AATKQ6ZMQ8 1374 aa19.2■□□□□ 0.66
ABCF1-206ENST00000479542 R3HDM1Q15032 1099 aaKnown RBP19.2■□□□□ 0.66
ABCF1-206ENST00000479542 USP6P35125 1406 aa19.19■□□□□ 0.66
ABCF1-206ENST00000479542 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
ABCF1-206ENST00000479542 CRB1P82279 1406 aa19.18■□□□□ 0.66
ABCF1-206ENST00000479542 COL5A2P05997 1499 aaPredicted RBP19.18■□□□□ 0.66
ABCF1-206ENST00000479542 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
ABCF1-206ENST00000479542 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
ABCF1-206ENST00000479542 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
ABCF1-206ENST00000479542 EVC2Q86UK5 1308 aa19.17■□□□□ 0.66
ABCF1-206ENST00000479542 SLIT3O75094 1523 aa19.16■□□□□ 0.66
ABCF1-206ENST00000479542 NLRP6P59044 892 aa19.16■□□□□ 0.66
ABCF1-206ENST00000479542 NBPF14Q5TI25 921 aa19.16■□□□□ 0.66
ABCF1-206ENST00000479542 PARP4Q9UKK3 1724 aaKnown RBP19.16■□□□□ 0.66
ABCF1-206ENST00000479542 L3MBTL2Q969R5 705 aa19.15■□□□□ 0.66
ABCF1-206ENST00000479542 RREB1Q92766 1687 aa19.14■□□□□ 0.66
ABCF1-206ENST00000479542 PLSCR1O15162 318 aa19.14■□□□□ 0.65
ABCF1-206ENST00000479542 CDCA7Q9BWT1 371 aaPredicted RBP19.14■□□□□ 0.65
ABCF1-206ENST00000479542 BCL9O00512 1426 aa19.14■□□□□ 0.65
ABCF1-206ENST00000479542 QRICH2Q9H0J4 1663 aa19.12■□□□□ 0.65
ABCF1-206ENST00000479542 KCNH5Q8NCM2 988 aa19.12■□□□□ 0.65
ABCF1-206ENST00000479542 OVOS2A0A0G2JMS6 1433 aa19.11■□□□□ 0.65
ABCF1-206ENST00000479542 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
ABCF1-206ENST00000479542 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
ABCF1-206ENST00000479542 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
ABCF1-206ENST00000479542 ARHGEF25Q86VW2 580 aa19.11■□□□□ 0.65
ABCF1-206ENST00000479542 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
ABCF1-206ENST00000479542 COL18A1P39060 1754 aa19.09■□□□□ 0.65
ABCF1-206ENST00000479542 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
ABCF1-206ENST00000479542 DDB1Q16531 1140 aa19.09■□□□□ 0.65
ABCF1-206ENST00000479542 RGPD3A6NKT7 1758 aaPredicted RBP19.09■□□□□ 0.65
ABCF1-206ENST00000479542 RGPD4Q7Z3J3 1758 aa19.09■□□□□ 0.65
ABCF1-206ENST00000479542 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.65
ABCF1-206ENST00000479542 PEAK1Q9H792 1746 aa19.08■□□□□ 0.65
ABCF1-206ENST00000479542 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms