RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 MARF1Q9Y4F3 1742 aaKnown RBP29.33■■■□□ 2.29
PKP4-209ENST00000479398 SBNO2Q9Y2G9 1366 aa29.32■■■□□ 2.28
PKP4-209ENST00000479398 ALS2Q96Q42 1657 aa29.31■■■□□ 2.28
PKP4-209ENST00000479398 ST20-MTHFSA0A0A6YYL1 179 aa29.26■■■□□ 2.27
PKP4-209ENST00000479398 RBM6P78332 1123 aaKnown RBP29.25■■■□□ 2.27
PKP4-209ENST00000479398 TRPC5Q9UL62 973 aaPredicted RBP29.25■■■□□ 2.27
PKP4-209ENST00000479398 ABTB2Q8N961 1025 aa29.23■■■□□ 2.27
PKP4-209ENST00000479398 ZNF692Q9BU19 519 aaPredicted RBP29.23■■■□□ 2.27
PKP4-209ENST00000479398 ATAD2Q6PL18 1390 aa29.23■■■□□ 2.27
PKP4-209ENST00000479398 BCL9LQ86UU0 1499 aa29.23■■■□□ 2.27
PKP4-209ENST00000479398 TESK2Q96S53 571 aa29.22■■■□□ 2.27
PKP4-209ENST00000479398 BRD4O60885 1362 aaPredicted RBP29.22■■■□□ 2.27
PKP4-209ENST00000479398 ABCA3Q99758 1704 aa29.22■■■□□ 2.27
PKP4-209ENST00000479398 FAM83GA6ND36 823 aa29.21■■■□□ 2.27
PKP4-209ENST00000479398 SLC24A1O60721 1099 aa29.21■■■□□ 2.27
PKP4-209ENST00000479398 NUTM2GQ5VZR2 741 aa29.21■■■□□ 2.27
PKP4-209ENST00000479398 UNC5CLQ8IV45 518 aa29.2■■■□□ 2.26
PKP4-209ENST00000479398 PUS7Q96PZ0 661 aaKnown RBP29.2■■■□□ 2.26
PKP4-209ENST00000479398 SLIT2O94813 1529 aa29.19■■■□□ 2.26
PKP4-209ENST00000479398 ATRNO75882 1429 aa29.18■■■□□ 2.26
PKP4-209ENST00000479398 USP6P35125 1406 aa29.18■■■□□ 2.26
PKP4-209ENST00000479398 NLRP13Q86W25 1043 aa29.16■■■□□ 2.26
PKP4-209ENST00000479398 CDK12Q9NYV4 1490 aaPredicted RBP29.16■■■□□ 2.26
PKP4-209ENST00000479398 USP47Q96K76 1375 aa29.15■■■□□ 2.26
PKP4-209ENST00000479398 CRYBG1Q9Y4K1 1723 aa29.14■■■□□ 2.26
PKP4-209ENST00000479398 SSH2Q76I76 1423 aa29.13■■■□□ 2.25
PKP4-209ENST00000479398 TMC1Q8TDI8 760 aa29.13■■■□□ 2.25
PKP4-209ENST00000479398 GJD4Q96KN9 370 aaPredicted RBP29.13■■■□□ 2.25
PKP4-209ENST00000479398 CPSF1Q10570 1443 aaKnown RBP29.12■■■□□ 2.25
PKP4-209ENST00000479398 SLC12A5Q9H2X9 1139 aa29.12■■■□□ 2.25
PKP4-209ENST00000479398 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.11■■■□□ 2.25
PKP4-209ENST00000479398 AKAP12Q02952 1782 aa29.11■■■□□ 2.25
PKP4-209ENST00000479398 NLRP6P59044 892 aa29.1■■■□□ 2.25
PKP4-209ENST00000479398 ZC3H6P61129 1189 aaKnown RBP29.1■■■□□ 2.25
PKP4-209ENST00000479398 TTC21BQ7Z4L5 1316 aa29.1■■■□□ 2.25
PKP4-209ENST00000479398 NWD2Q9ULI1 1742 aa29.09■■■□□ 2.25
PKP4-209ENST00000479398 PRDM11Q9NQV5 511 aa29.09■■■□□ 2.25
PKP4-209ENST00000479398 BTG4Q9NY30 223 aa29.09■■■□□ 2.25
PKP4-209ENST00000479398 KTN1Q86UP2 1357 aaKnown RBP29.09■■■□□ 2.25
PKP4-209ENST00000479398 TMF1P82094 1093 aa29.08■■■□□ 2.25
PKP4-209ENST00000479398 VPS72Q15906 364 aa29.08■■■□□ 2.25
PKP4-209ENST00000479398 USP19O94966 1318 aa29.08■■■□□ 2.25
PKP4-209ENST00000479398 PLCH1Q4KWH8 1693 aa29.08■■■□□ 2.25
PKP4-209ENST00000479398 GCP02774 474 aa29.07■■■□□ 2.24
PKP4-209ENST00000479398 KIAA0232Q92628 1395 aa29.07■■■□□ 2.24
PKP4-209ENST00000479398 COL14A1Q05707 1796 aaKnown RBP29.06■■■□□ 2.24
PKP4-209ENST00000479398 PHRF1Q9P1Y6 1649 aaKnown RBP29.06■■■□□ 2.24
PKP4-209ENST00000479398 RGS12O14924 1447 aa29.05■■■□□ 2.24
PKP4-209ENST00000479398 TTC21AQ8NDW8 1320 aa29.05■■■□□ 2.24
PKP4-209ENST00000479398 HDGFL2Q7Z4V5 671 aaPredicted RBP29.05■■■□□ 2.24
PKP4-209ENST00000479398 CHRNA2Q15822 529 aa29.04■■■□□ 2.24
PKP4-209ENST00000479398 TERF2IPQ9NYB0 399 aa29.04■■■□□ 2.24
PKP4-209ENST00000479398 CCDC9Q9Y3X0 531 aaKnown RBP29.03■■■□□ 2.24
PKP4-209ENST00000479398 CD163L1Q9NR16 1453 aa29.03■■■□□ 2.24
PKP4-209ENST00000479398 MON2Q7Z3U7 1717 aa29■■■□□ 2.23
PKP4-209ENST00000479398 CPDO75976 1380 aa29■■■□□ 2.23
PKP4-209ENST00000479398 PIK3C2AO00443 1686 aa28.99■■■□□ 2.23
PKP4-209ENST00000479398 CDCA8Q53HL2 280 aa28.99■■■□□ 2.23
PKP4-209ENST00000479398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.99■■■□□ 2.23
PKP4-209ENST00000479398 NINLQ9Y2I6 1382 aa28.99■■■□□ 2.23
PKP4-209ENST00000479398 GLI3P10071 1580 aa28.98■■■□□ 2.23
PKP4-209ENST00000479398 NRKQ7Z2Y5 1582 aa28.98■■■□□ 2.23
PKP4-209ENST00000479398 NRAPQ86VF7 1730 aa28.97■■■□□ 2.23
PKP4-209ENST00000479398 ONECUT3O60422 494 aaPredicted RBP28.96■■■□□ 2.23
PKP4-209ENST00000479398 A0A1W2PP64 1363 aa28.95■■■□□ 2.22
PKP4-209ENST00000479398 SLIT3O75094 1523 aa28.94■■■□□ 2.22
PKP4-209ENST00000479398 EVA1CP58658 441 aa28.94■■■□□ 2.22
PKP4-209ENST00000479398 EIF4G2P78344 907 aaKnown RBP eCLIP28.94■■■□□ 2.22
PKP4-209ENST00000479398 KCNH5Q8NCM2 988 aa28.94■■■□□ 2.22
PKP4-209ENST00000479398 UPF1Q92900 1129 aaKnown RBP eCLIP28.94■■■□□ 2.22
PKP4-209ENST00000479398 NME9Q86XW9 330 aa28.93■■■□□ 2.22
PKP4-209ENST00000479398 STRN4Q9NRL3 753 aa28.93■■■□□ 2.22
PKP4-209ENST00000479398 ZRANB1Q9UGI0 708 aa28.93■■■□□ 2.22
PKP4-209ENST00000479398 EDC4Q6P2E9 1401 aaKnown RBP28.93■■■□□ 2.22
PKP4-209ENST00000479398 SPATA31A5Q5VU36 1347 aa28.92■■■□□ 2.22
PKP4-209ENST00000479398 SPATA31A7Q8IWB4 1347 aa28.92■■■□□ 2.22
PKP4-209ENST00000479398 USP31Q70CQ4 1352 aa28.91■■■□□ 2.22
PKP4-209ENST00000479398 SEPT12Q8IYM1 358 aa28.91■■■□□ 2.22
PKP4-209ENST00000479398 CAMTA1Q9Y6Y1 1673 aa28.9■■■□□ 2.22
PKP4-209ENST00000479398 ZBTB7CA1YPR0 619 aa28.9■■■□□ 2.22
PKP4-209ENST00000479398 HSPA5P11021 654 aaKnown RBP28.89■■■□□ 2.22
PKP4-209ENST00000479398 SOX12O15370 315 aa28.88■■■□□ 2.21
PKP4-209ENST00000479398 ARHGEF25Q86VW2 580 aa28.88■■■□□ 2.21
PKP4-209ENST00000479398 AATKQ6ZMQ8 1374 aa28.88■■■□□ 2.21
PKP4-209ENST00000479398 ANKRD36BQ8N2N9 1353 aa28.88■■■□□ 2.21
PKP4-209ENST00000479398 FAM98CQ17RN3 349 aaKnown RBP28.87■■■□□ 2.21
PKP4-209ENST00000479398 LMO7Q8WWI1 1683 aa28.86■■■□□ 2.21
PKP4-209ENST00000479398 SPATA31A1Q5TZJ5 1347 aa28.86■■■□□ 2.21
PKP4-209ENST00000479398 LARP1Q6PKG0 1096 aaKnown RBP28.84■■■□□ 2.21
PKP4-209ENST00000479398 AXIN2Q9Y2T1 843 aa28.82■■■□□ 2.2
PKP4-209ENST00000479398 BRWD3Q6RI45 1802 aa28.82■■■□□ 2.2
PKP4-209ENST00000479398 COL18A1P39060 1754 aa28.81■■■□□ 2.2
PKP4-209ENST00000479398 USP54Q70EL1 1684 aa28.81■■■□□ 2.2
PKP4-209ENST00000479398 A0A0G2JS52 829 aa28.81■■■□□ 2.2
PKP4-209ENST00000479398 MYT1Q01538 1121 aa28.81■■■□□ 2.2
PKP4-209ENST00000479398 USP35Q9P2H5 1018 aa28.8■■■□□ 2.2
PKP4-209ENST00000479398 NFAT5O94916 1531 aa28.79■■■□□ 2.2
PKP4-209ENST00000479398 COL5A2P05997 1499 aaPredicted RBP28.78■■■□□ 2.2
PKP4-209ENST00000479398 KRT27Q7Z3Y8 459 aa28.78■■■□□ 2.2
PKP4-209ENST00000479398 BARGINQ6ZT62 677 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms