RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
FMR1-211ENST00000478848 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
FMR1-211ENST00000478848 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
FMR1-211ENST00000478848 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
FMR1-211ENST00000478848 MTFR1LQ9H019 292 aa13.38□□□□□ -0.27
FMR1-211ENST00000478848 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
FMR1-211ENST00000478848 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
FMR1-211ENST00000478848 IQGAP3Q86VI3 1631 aa13.38□□□□□ -0.27
FMR1-211ENST00000478848 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
FMR1-211ENST00000478848 DNAJC5GQ8N7S2 189 aa13.37□□□□□ -0.27
FMR1-211ENST00000478848 NAIPQ13075 1403 aa13.37□□□□□ -0.27
FMR1-211ENST00000478848 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
FMR1-211ENST00000478848 APLP1P51693 650 aa13.36□□□□□ -0.27
FMR1-211ENST00000478848 PPP4R3CPQ6ZMV5 832 aa13.36□□□□□ -0.27
FMR1-211ENST00000478848 E9PCH4 1651 aa13.36□□□□□ -0.27
FMR1-211ENST00000478848 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
FMR1-211ENST00000478848 RRBP1Q9P2E9 1410 aaKnown RBP13.35□□□□□ -0.27
FMR1-211ENST00000478848 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
FMR1-211ENST00000478848 MAP3K5Q99683 1374 aa13.34□□□□□ -0.27
FMR1-211ENST00000478848 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
FMR1-211ENST00000478848 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.28
FMR1-211ENST00000478848 PLSCR1O15162 318 aa13.33□□□□□ -0.28
FMR1-211ENST00000478848 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
FMR1-211ENST00000478848 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
FMR1-211ENST00000478848 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
FMR1-211ENST00000478848 TECPR2O15040 1411 aa13.32□□□□□ -0.28
FMR1-211ENST00000478848 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
FMR1-211ENST00000478848 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
FMR1-211ENST00000478848 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
FMR1-211ENST00000478848 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
FMR1-211ENST00000478848 PROM2Q8N271 834 aa13.31□□□□□ -0.28
FMR1-211ENST00000478848 SLC15A2Q16348 729 aa13.3□□□□□ -0.28
FMR1-211ENST00000478848 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
FMR1-211ENST00000478848 GRIN3BO60391 1043 aa13.29□□□□□ -0.28
FMR1-211ENST00000478848 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
FMR1-211ENST00000478848 WWC3Q9ULE0 1092 aa13.29□□□□□ -0.28
FMR1-211ENST00000478848 PCNTO95613 3336 aa13.28□□□□□ -0.28
FMR1-211ENST00000478848 CHRNA2Q15822 529 aa13.28□□□□□ -0.28
FMR1-211ENST00000478848 BARGINQ6ZT62 677 aa13.28□□□□□ -0.28
FMR1-211ENST00000478848 STK26Q9P289 416 aa13.28□□□□□ -0.28
FMR1-211ENST00000478848 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
FMR1-211ENST00000478848 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
FMR1-211ENST00000478848 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
FMR1-211ENST00000478848 EVA1CP58658 441 aa13.25□□□□□ -0.29
FMR1-211ENST00000478848 PLEKHH1Q9ULM0 1364 aa13.24□□□□□ -0.29
FMR1-211ENST00000478848 KIF3CO14782 793 aa13.24□□□□□ -0.29
FMR1-211ENST00000478848 VGFO15240 615 aaPredicted RBP13.24□□□□□ -0.29
FMR1-211ENST00000478848 TCP11L2Q8N4U5 519 aa13.24□□□□□ -0.29
FMR1-211ENST00000478848 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
FMR1-211ENST00000478848 FMN2Q9NZ56 1722 aa13.24□□□□□ -0.29
FMR1-211ENST00000478848 C11orf95C9JLR9 678 aaPredicted RBP13.23□□□□□ -0.29
FMR1-211ENST00000478848 HTRA3P83110 453 aa13.23□□□□□ -0.29
FMR1-211ENST00000478848 TXNRD1Q16881 649 aa13.23□□□□□ -0.29
FMR1-211ENST00000478848 KLRG1Q96E93 195 aa13.23□□□□□ -0.29
FMR1-211ENST00000478848 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
FMR1-211ENST00000478848 KIAA0232Q92628 1395 aa13.22□□□□□ -0.29
FMR1-211ENST00000478848 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
FMR1-211ENST00000478848 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
FMR1-211ENST00000478848 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
FMR1-211ENST00000478848 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
FMR1-211ENST00000478848 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
FMR1-211ENST00000478848 ADCY9O60503 1353 aa13.21□□□□□ -0.29
FMR1-211ENST00000478848 RGPD8O14715 1765 aaPredicted RBP13.21□□□□□ -0.29
FMR1-211ENST00000478848 NUP155O75694 1391 aa13.2□□□□□ -0.3
FMR1-211ENST00000478848 POLD1P28340 1107 aa13.19□□□□□ -0.3
FMR1-211ENST00000478848 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
FMR1-211ENST00000478848 SSH2Q76I76 1423 aa13.19□□□□□ -0.3
FMR1-211ENST00000478848 AATKQ6ZMQ8 1374 aa13.19□□□□□ -0.3
FMR1-211ENST00000478848 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
FMR1-211ENST00000478848 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
FMR1-211ENST00000478848 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
FMR1-211ENST00000478848 GPRASP1Q5JY77 1395 aa13.16□□□□□ -0.3
FMR1-211ENST00000478848 PEAK1Q9H792 1746 aa13.16□□□□□ -0.3
FMR1-211ENST00000478848 TOMM70O94826 608 aa13.15□□□□□ -0.3
FMR1-211ENST00000478848 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
FMR1-211ENST00000478848 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
FMR1-211ENST00000478848 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
FMR1-211ENST00000478848 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
FMR1-211ENST00000478848 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
FMR1-211ENST00000478848 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
FMR1-211ENST00000478848 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
FMR1-211ENST00000478848 TMEM132EQ6IEE7 984 aa13.13□□□□□ -0.31
FMR1-211ENST00000478848 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
FMR1-211ENST00000478848 HSPA1AP0DMV8 641 aaKnown RBP13.12□□□□□ -0.31
FMR1-211ENST00000478848 HSPA1BP0DMV9 641 aaKnown RBP13.12□□□□□ -0.31
FMR1-211ENST00000478848 DDB1Q16531 1140 aa13.12□□□□□ -0.31
FMR1-211ENST00000478848 ZNF827Q17R98 1081 aa13.12□□□□□ -0.31
FMR1-211ENST00000478848 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
FMR1-211ENST00000478848 ATP7BP35670 1465 aa13.11□□□□□ -0.31
FMR1-211ENST00000478848 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
FMR1-211ENST00000478848 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
FMR1-211ENST00000478848 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
FMR1-211ENST00000478848 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
FMR1-211ENST00000478848 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
FMR1-211ENST00000478848 NUTM2GQ5VZR2 741 aa13.1□□□□□ -0.31
FMR1-211ENST00000478848 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
FMR1-211ENST00000478848 TNS2Q63HR2 1409 aa13.1□□□□□ -0.31
FMR1-211ENST00000478848 RPGRIP1LQ68CZ1 1315 aa13.1□□□□□ -0.31
FMR1-211ENST00000478848 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
FMR1-211ENST00000478848 KIF1BO60333 1816 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms