RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 TRIM37O94972 964 aa18.32■□□□□ 0.52
SBF1-208ENST00000477234 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
SBF1-208ENST00000477234 THSD7AQ9UPZ6 1657 aa18.31■□□□□ 0.52
SBF1-208ENST00000477234 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
SBF1-208ENST00000477234 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
SBF1-208ENST00000477234 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
SBF1-208ENST00000477234 PDE3BQ13370 1112 aa18.3■□□□□ 0.52
SBF1-208ENST00000477234 KCNQ2O43526 872 aa18.29■□□□□ 0.52
SBF1-208ENST00000477234 FAM182BQ5T319 152 aa18.29■□□□□ 0.52
SBF1-208ENST00000477234 POGKQ9P215 609 aa18.28■□□□□ 0.52
SBF1-208ENST00000477234 SPATA31A1Q5TZJ5 1347 aa18.27■□□□□ 0.52
SBF1-208ENST00000477234 PMFBP1Q8TBY8 1022 aa18.27■□□□□ 0.52
SBF1-208ENST00000477234 C14orf93Q9H972 538 aaKnown RBP18.27■□□□□ 0.52
SBF1-208ENST00000477234 RREB1Q92766 1687 aa18.25■□□□□ 0.51
SBF1-208ENST00000477234 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
SBF1-208ENST00000477234 BARGINQ6ZT62 677 aa18.25■□□□□ 0.51
SBF1-208ENST00000477234 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
SBF1-208ENST00000477234 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
SBF1-208ENST00000477234 PRAM1Q96QH2 718 aa18.24■□□□□ 0.51
SBF1-208ENST00000477234 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
SBF1-208ENST00000477234 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
SBF1-208ENST00000477234 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
SBF1-208ENST00000477234 EVA1CP58658 441 aa18.22■□□□□ 0.51
SBF1-208ENST00000477234 THRAP3Q9Y2W1 955 aaKnown RBP18.21■□□□□ 0.51
SBF1-208ENST00000477234 DLC1Q96QB1 1528 aa18.21■□□□□ 0.51
SBF1-208ENST00000477234 NUP188Q5SRE5 1749 aa18.2■□□□□ 0.5
SBF1-208ENST00000477234 SAFB2Q14151 953 aaKnown RBP eCLIP18.2■□□□□ 0.5
SBF1-208ENST00000477234 STRN4Q9NRL3 753 aa18.19■□□□□ 0.5
SBF1-208ENST00000477234 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
SBF1-208ENST00000477234 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
SBF1-208ENST00000477234 PLSCR1O15162 318 aa18.16■□□□□ 0.5
SBF1-208ENST00000477234 ZNF784Q8NCA9 323 aaPredicted RBP18.16■□□□□ 0.5
SBF1-208ENST00000477234 USP35Q9P2H5 1018 aa18.16■□□□□ 0.5
SBF1-208ENST00000477234 ATP7BP35670 1465 aa18.15■□□□□ 0.5
SBF1-208ENST00000477234 TULP4Q9NRJ4 1543 aa18.15■□□□□ 0.5
SBF1-208ENST00000477234 CFAP70Q5T0N1 1121 aa18.15■□□□□ 0.5
SBF1-208ENST00000477234 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
SBF1-208ENST00000477234 RGPD3A6NKT7 1758 aaPredicted RBP18.14■□□□□ 0.5
SBF1-208ENST00000477234 RGPD4Q7Z3J3 1758 aa18.14■□□□□ 0.5
SBF1-208ENST00000477234 CHD4Q14839 1912 aa18.14■□□□□ 0.49
SBF1-208ENST00000477234 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
SBF1-208ENST00000477234 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
SBF1-208ENST00000477234 SSH2Q76I76 1423 aa18.14■□□□□ 0.49
SBF1-208ENST00000477234 WASLO00401 505 aaPredicted RBP18.13■□□□□ 0.49
SBF1-208ENST00000477234 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
SBF1-208ENST00000477234 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
SBF1-208ENST00000477234 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
SBF1-208ENST00000477234 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
SBF1-208ENST00000477234 OVOS2A0A0G2JMS6 1433 aa18.1■□□□□ 0.49
SBF1-208ENST00000477234 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
SBF1-208ENST00000477234 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
SBF1-208ENST00000477234 C1QTNF8P60827 252 aa18.1■□□□□ 0.49
SBF1-208ENST00000477234 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
SBF1-208ENST00000477234 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
SBF1-208ENST00000477234 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.49
SBF1-208ENST00000477234 CPDO75976 1380 aa18.07■□□□□ 0.48
SBF1-208ENST00000477234 PRR36Q9H6K5 1346 aa18.07■□□□□ 0.48
SBF1-208ENST00000477234 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
SBF1-208ENST00000477234 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
SBF1-208ENST00000477234 PHRF1Q9P1Y6 1649 aaKnown RBP18.07■□□□□ 0.48
SBF1-208ENST00000477234 PARP4Q9UKK3 1724 aaKnown RBP18.06■□□□□ 0.48
SBF1-208ENST00000477234 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
SBF1-208ENST00000477234 CAMTA1Q9Y6Y1 1673 aa18.05■□□□□ 0.48
SBF1-208ENST00000477234 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
SBF1-208ENST00000477234 CDCA7Q9BWT1 371 aaPredicted RBP18.04■□□□□ 0.48
SBF1-208ENST00000477234 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
SBF1-208ENST00000477234 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
SBF1-208ENST00000477234 DDB1Q16531 1140 aa18.03■□□□□ 0.48
SBF1-208ENST00000477234 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
SBF1-208ENST00000477234 ABTB2Q8N961 1025 aa18.03■□□□□ 0.48
SBF1-208ENST00000477234 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
SBF1-208ENST00000477234 SYT17Q9BSW7 474 aa18.03■□□□□ 0.48
SBF1-208ENST00000477234 CASZ1Q86V15 1759 aa18.03■□□□□ 0.48
SBF1-208ENST00000477234 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
SBF1-208ENST00000477234 CRB1P82279 1406 aa18.01■□□□□ 0.47
SBF1-208ENST00000477234 ZBTB7AO95365 584 aa18.01■□□□□ 0.47
SBF1-208ENST00000477234 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
SBF1-208ENST00000477234 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
SBF1-208ENST00000477234 ADGRB1O14514 1584 aa18■□□□□ 0.47
SBF1-208ENST00000477234 SBF2Q86WG5 1849 aa18■□□□□ 0.47
SBF1-208ENST00000477234 BCL9O00512 1426 aa18■□□□□ 0.47
SBF1-208ENST00000477234 PTGER2P43116 358 aa18■□□□□ 0.47
SBF1-208ENST00000477234 FHDC1Q9C0D6 1143 aaPredicted RBP18■□□□□ 0.47
SBF1-208ENST00000477234 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
SBF1-208ENST00000477234 GIGYF1O75420 1035 aaPredicted RBP17.99■□□□□ 0.47
SBF1-208ENST00000477234 NUTM2GQ5VZR2 741 aa17.99■□□□□ 0.47
SBF1-208ENST00000477234 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
SBF1-208ENST00000477234 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
SBF1-208ENST00000477234 USP19O94966 1318 aa17.98■□□□□ 0.47
SBF1-208ENST00000477234 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
SBF1-208ENST00000477234 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
SBF1-208ENST00000477234 PLEKHG3A1L390 1219 aa17.97■□□□□ 0.47
SBF1-208ENST00000477234 GCP02774 474 aa17.97■□□□□ 0.47
SBF1-208ENST00000477234 SLC15A2Q16348 729 aa17.97■□□□□ 0.47
SBF1-208ENST00000477234 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
SBF1-208ENST00000477234 ACEP12821 1306 aa17.97■□□□□ 0.47
SBF1-208ENST00000477234 MYOM1P52179 1685 aa17.96■□□□□ 0.47
SBF1-208ENST00000477234 UTRNP46939 3433 aa17.96■□□□□ 0.47
SBF1-208ENST00000477234 PEAK1Q9H792 1746 aa17.96■□□□□ 0.47
SBF1-208ENST00000477234 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms