RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 RREB1Q92766 1687 aa16.84■□□□□ 0.29
LSM2-212ENST00000477182 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
LSM2-212ENST00000477182 KCNQ2O43526 872 aa16.83■□□□□ 0.28
LSM2-212ENST00000477182 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
LSM2-212ENST00000477182 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
LSM2-212ENST00000477182 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
LSM2-212ENST00000477182 SIRT1Q96EB6 747 aa16.81■□□□□ 0.28
LSM2-212ENST00000477182 ADGRF5Q8IZF2 1346 aa16.8■□□□□ 0.28
LSM2-212ENST00000477182 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
LSM2-212ENST00000477182 ZNF784Q8NCA9 323 aaPredicted RBP16.8■□□□□ 0.28
LSM2-212ENST00000477182 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
LSM2-212ENST00000477182 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
LSM2-212ENST00000477182 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.28
LSM2-212ENST00000477182 SPATA31A1Q5TZJ5 1347 aa16.77■□□□□ 0.28
LSM2-212ENST00000477182 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
LSM2-212ENST00000477182 GPRASP1Q5JY77 1395 aa16.76■□□□□ 0.27
LSM2-212ENST00000477182 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
LSM2-212ENST00000477182 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
LSM2-212ENST00000477182 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
LSM2-212ENST00000477182 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
LSM2-212ENST00000477182 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
LSM2-212ENST00000477182 C1QTNF8P60827 252 aa16.74■□□□□ 0.27
LSM2-212ENST00000477182 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
LSM2-212ENST00000477182 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
LSM2-212ENST00000477182 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
LSM2-212ENST00000477182 BARGINQ6ZT62 677 aa16.71■□□□□ 0.27
LSM2-212ENST00000477182 CHD4Q14839 1912 aa16.7■□□□□ 0.26
LSM2-212ENST00000477182 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
LSM2-212ENST00000477182 CRYBG1Q9Y4K1 1723 aa16.7■□□□□ 0.26
LSM2-212ENST00000477182 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
LSM2-212ENST00000477182 SIN3AQ96ST3 1273 aa16.69■□□□□ 0.26
LSM2-212ENST00000477182 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
LSM2-212ENST00000477182 UTRNP46939 3433 aa16.68■□□□□ 0.26
LSM2-212ENST00000477182 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
LSM2-212ENST00000477182 PRAM1Q96QH2 718 aa16.67■□□□□ 0.26
LSM2-212ENST00000477182 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
LSM2-212ENST00000477182 SPATA31E1Q6ZUB1 1445 aa16.67■□□□□ 0.26
LSM2-212ENST00000477182 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
LSM2-212ENST00000477182 RGPD3A6NKT7 1758 aaPredicted RBP16.66■□□□□ 0.26
LSM2-212ENST00000477182 RGPD4Q7Z3J3 1758 aa16.66■□□□□ 0.26
LSM2-212ENST00000477182 KIAA0232Q92628 1395 aa16.66■□□□□ 0.26
LSM2-212ENST00000477182 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
LSM2-212ENST00000477182 EVA1CP58658 441 aa16.66■□□□□ 0.26
LSM2-212ENST00000477182 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
LSM2-212ENST00000477182 SAFB2Q14151 953 aaKnown RBP eCLIP16.66■□□□□ 0.26
LSM2-212ENST00000477182 C14orf93Q9H972 538 aaKnown RBP16.66■□□□□ 0.26
LSM2-212ENST00000477182 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
LSM2-212ENST00000477182 POGKQ9P215 609 aa16.65■□□□□ 0.26
LSM2-212ENST00000477182 PLSCR1O15162 318 aa16.64■□□□□ 0.25
LSM2-212ENST00000477182 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
LSM2-212ENST00000477182 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
LSM2-212ENST00000477182 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
LSM2-212ENST00000477182 THRAP3Q9Y2W1 955 aaKnown RBP16.63■□□□□ 0.25
LSM2-212ENST00000477182 SSH2Q76I76 1423 aa16.62■□□□□ 0.25
LSM2-212ENST00000477182 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
LSM2-212ENST00000477182 MYOM1P52179 1685 aa16.62■□□□□ 0.25
LSM2-212ENST00000477182 PHRF1Q9P1Y6 1649 aaKnown RBP16.6■□□□□ 0.25
LSM2-212ENST00000477182 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
LSM2-212ENST00000477182 PTGER2P43116 358 aa16.6■□□□□ 0.25
LSM2-212ENST00000477182 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
LSM2-212ENST00000477182 SYT17Q9BSW7 474 aa16.6■□□□□ 0.25
LSM2-212ENST00000477182 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
LSM2-212ENST00000477182 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
LSM2-212ENST00000477182 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
LSM2-212ENST00000477182 ANO8Q9HCE9 1232 aaPredicted RBP16.59■□□□□ 0.25
LSM2-212ENST00000477182 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
LSM2-212ENST00000477182 OVOS2A0A0J9YW53 1432 aa16.59■□□□□ 0.25
LSM2-212ENST00000477182 OVOS2Q6IE36 1432 aa16.59■□□□□ 0.25
LSM2-212ENST00000477182 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
LSM2-212ENST00000477182 LARP1Q6PKG0 1096 aaKnown RBP16.58■□□□□ 0.24
LSM2-212ENST00000477182 FHDC1Q9C0D6 1143 aaPredicted RBP16.58■□□□□ 0.24
LSM2-212ENST00000477182 BCL11BQ9C0K0 894 aaPredicted RBP16.58■□□□□ 0.24
LSM2-212ENST00000477182 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
LSM2-212ENST00000477182 ATP7BP35670 1465 aa16.58■□□□□ 0.24
LSM2-212ENST00000477182 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
LSM2-212ENST00000477182 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
LSM2-212ENST00000477182 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
LSM2-212ENST00000477182 TONSLQ96HA7 1378 aa16.55■□□□□ 0.24
LSM2-212ENST00000477182 WASLO00401 505 aaPredicted RBP16.55■□□□□ 0.24
LSM2-212ENST00000477182 PDGFDQ9GZP0 370 aaPredicted RBP16.55■□□□□ 0.24
LSM2-212ENST00000477182 ITSN1Q15811 1721 aa16.54■□□□□ 0.24
LSM2-212ENST00000477182 PEAK1Q9H792 1746 aa16.54■□□□□ 0.24
LSM2-212ENST00000477182 CEP350Q5VT06 3117 aa16.54■□□□□ 0.24
LSM2-212ENST00000477182 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
LSM2-212ENST00000477182 STK32BQ9NY57 414 aa16.54■□□□□ 0.24
LSM2-212ENST00000477182 MINK1Q8N4C8 1332 aaPredicted RBP16.53■□□□□ 0.24
LSM2-212ENST00000477182 CPDO75976 1380 aa16.52■□□□□ 0.24
LSM2-212ENST00000477182 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
LSM2-212ENST00000477182 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.23
LSM2-212ENST00000477182 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
LSM2-212ENST00000477182 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
LSM2-212ENST00000477182 SLC15A2Q16348 729 aa16.5■□□□□ 0.23
LSM2-212ENST00000477182 DDB1Q16531 1140 aa16.5■□□□□ 0.23
LSM2-212ENST00000477182 PROM2Q8N271 834 aa16.5■□□□□ 0.23
LSM2-212ENST00000477182 TRAK1Q9UPV9 953 aa16.5■□□□□ 0.23
LSM2-212ENST00000477182 CRB1P82279 1406 aa16.49■□□□□ 0.23
LSM2-212ENST00000477182 GPR162Q16538 588 aa16.49■□□□□ 0.23
LSM2-212ENST00000477182 ARXQ96QS3 562 aa16.49■□□□□ 0.23
LSM2-212ENST00000477182 SGIP1Q9BQI5 828 aa16.49■□□□□ 0.23
LSM2-212ENST00000477182 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms