RNA–Protein interactions for RNA: ENST00000477109.1

KDM5C-211, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-211ENST00000477109 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
KDM5C-211ENST00000477109 FAM98CQ17RN3 349 aaKnown RBP16.27■□□□□ 0.2
KDM5C-211ENST00000477109 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
KDM5C-211ENST00000477109 TRPM3Q9HCF6 1732 aaPredicted RBP16.26■□□□□ 0.19
KDM5C-211ENST00000477109 TIMELESSQ9UNS1 1208 aa16.26■□□□□ 0.19
KDM5C-211ENST00000477109 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
KDM5C-211ENST00000477109 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
KDM5C-211ENST00000477109 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
KDM5C-211ENST00000477109 PAK3O75914 559 aaPredicted RBP16.24■□□□□ 0.19
KDM5C-211ENST00000477109 NRAPQ86VF7 1730 aa16.24■□□□□ 0.19
KDM5C-211ENST00000477109 EIF3AQ14152 1382 aaKnown RBP16.24■□□□□ 0.19
KDM5C-211ENST00000477109 BAG6P46379 1132 aa16.23■□□□□ 0.19
KDM5C-211ENST00000477109 NGDNQ8NEJ9 315 aaKnown RBP16.23■□□□□ 0.19
KDM5C-211ENST00000477109 ALS2Q96Q42 1657 aa16.23■□□□□ 0.19
KDM5C-211ENST00000477109 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
KDM5C-211ENST00000477109 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
KDM5C-211ENST00000477109 FAM182BQ5T319 152 aa16.22■□□□□ 0.19
KDM5C-211ENST00000477109 COL14A1Q05707 1796 aaKnown RBP16.22■□□□□ 0.19
KDM5C-211ENST00000477109 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
KDM5C-211ENST00000477109 SPATA31A5Q5VU36 1347 aa16.2■□□□□ 0.18
KDM5C-211ENST00000477109 SPATA31A7Q8IWB4 1347 aa16.2■□□□□ 0.18
KDM5C-211ENST00000477109 EN1Q05925 392 aaPredicted RBP16.2■□□□□ 0.18
KDM5C-211ENST00000477109 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
KDM5C-211ENST00000477109 CRYBG1Q9Y4K1 1723 aa16.17■□□□□ 0.18
KDM5C-211ENST00000477109 CHRNA2Q15822 529 aa16.17■□□□□ 0.18
KDM5C-211ENST00000477109 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
KDM5C-211ENST00000477109 LRP5O75197 1615 aa16.16■□□□□ 0.18
KDM5C-211ENST00000477109 STRN4Q9NRL3 753 aa16.16■□□□□ 0.18
KDM5C-211ENST00000477109 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
KDM5C-211ENST00000477109 NUTM2GQ5VZR2 741 aa16.15■□□□□ 0.18
KDM5C-211ENST00000477109 ATP7BP35670 1465 aa16.15■□□□□ 0.18
KDM5C-211ENST00000477109 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
KDM5C-211ENST00000477109 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.18
KDM5C-211ENST00000477109 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
KDM5C-211ENST00000477109 ARHGEF28Q8N1W1 1705 aaKnown RBP16.14■□□□□ 0.17
KDM5C-211ENST00000477109 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
KDM5C-211ENST00000477109 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
KDM5C-211ENST00000477109 TRPM1Q7Z4N2 1603 aa16.13■□□□□ 0.17
KDM5C-211ENST00000477109 R3HDM1Q15032 1099 aaKnown RBP16.13■□□□□ 0.17
KDM5C-211ENST00000477109 ITSN1Q15811 1721 aa16.13■□□□□ 0.17
KDM5C-211ENST00000477109 EZH2Q15910 746 aaKnown RBP16.12■□□□□ 0.17
KDM5C-211ENST00000477109 USP35Q9P2H5 1018 aa16.12■□□□□ 0.17
KDM5C-211ENST00000477109 TRIM37O94972 964 aa16.11■□□□□ 0.17
KDM5C-211ENST00000477109 ACEP12821 1306 aa16.11■□□□□ 0.17
KDM5C-211ENST00000477109 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
KDM5C-211ENST00000477109 EVA1CP58658 441 aa16.1■□□□□ 0.17
KDM5C-211ENST00000477109 NBPF8Q3BBV2 869 aa16.1■□□□□ 0.17
KDM5C-211ENST00000477109 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
KDM5C-211ENST00000477109 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
KDM5C-211ENST00000477109 DISP2A7MBM2 1401 aa16.1■□□□□ 0.17
KDM5C-211ENST00000477109 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
KDM5C-211ENST00000477109 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
KDM5C-211ENST00000477109 APBA3O96018 575 aa16.08■□□□□ 0.16
KDM5C-211ENST00000477109 ABTB2Q8N961 1025 aa16.08■□□□□ 0.16
KDM5C-211ENST00000477109 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.16
KDM5C-211ENST00000477109 PLEKHG3A1L390 1219 aa16.07■□□□□ 0.16
KDM5C-211ENST00000477109 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
KDM5C-211ENST00000477109 SSH2Q76I76 1423 aa16.07■□□□□ 0.16
KDM5C-211ENST00000477109 TOPAZ1Q8N9V7 1692 aa16.06■□□□□ 0.16
KDM5C-211ENST00000477109 ROCK2O75116 1388 aaKnown RBP16.06■□□□□ 0.16
KDM5C-211ENST00000477109 LARP1Q6PKG0 1096 aaKnown RBP16.06■□□□□ 0.16
KDM5C-211ENST00000477109 BARGINQ6ZT62 677 aa16.06■□□□□ 0.16
KDM5C-211ENST00000477109 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
KDM5C-211ENST00000477109 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
KDM5C-211ENST00000477109 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
KDM5C-211ENST00000477109 TCP11L2Q8N4U5 519 aa16.04■□□□□ 0.16
KDM5C-211ENST00000477109 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
KDM5C-211ENST00000477109 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
KDM5C-211ENST00000477109 CPDO75976 1380 aa16.02■□□□□ 0.16
KDM5C-211ENST00000477109 USP19O94966 1318 aa16.02■□□□□ 0.16
KDM5C-211ENST00000477109 GCP02774 474 aa16.02■□□□□ 0.16
KDM5C-211ENST00000477109 CABP2Q9NPB3 220 aa16.02■□□□□ 0.16
KDM5C-211ENST00000477109 PARD3Q8TEW0 1356 aa16.01■□□□□ 0.15
KDM5C-211ENST00000477109 LMO7Q8WWI1 1683 aa16.01■□□□□ 0.15
KDM5C-211ENST00000477109 PPIP5K1Q6PFW1 1433 aa16.01■□□□□ 0.15
KDM5C-211ENST00000477109 ZBTB7CA1YPR0 619 aa16■□□□□ 0.15
KDM5C-211ENST00000477109 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
KDM5C-211ENST00000477109 CENPJQ9HC77 1338 aaPredicted RBP15.99■□□□□ 0.15
KDM5C-211ENST00000477109 THRAP3Q9Y2W1 955 aaKnown RBP15.99■□□□□ 0.15
KDM5C-211ENST00000477109 NBPF14Q5TI25 921 aa15.98■□□□□ 0.15
KDM5C-211ENST00000477109 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
KDM5C-211ENST00000477109 CABP1Q9NZU7 370 aa15.97■□□□□ 0.15
KDM5C-211ENST00000477109 RREB1Q92766 1687 aa15.97■□□□□ 0.15
KDM5C-211ENST00000477109 NLRP6P59044 892 aa15.96■□□□□ 0.15
KDM5C-211ENST00000477109 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
KDM5C-211ENST00000477109 CRB1P82279 1406 aa15.95■□□□□ 0.14
KDM5C-211ENST00000477109 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
KDM5C-211ENST00000477109 USP6P35125 1406 aa15.94■□□□□ 0.14
KDM5C-211ENST00000477109 PARP4Q9UKK3 1724 aaKnown RBP15.94■□□□□ 0.14
KDM5C-211ENST00000477109 QRICH2Q9H0J4 1663 aa15.93■□□□□ 0.14
KDM5C-211ENST00000477109 AATKQ6ZMQ8 1374 aa15.93■□□□□ 0.14
KDM5C-211ENST00000477109 SBNO2Q9Y2G9 1366 aa15.93■□□□□ 0.14
KDM5C-211ENST00000477109 C11orf95C9JLR9 678 aaPredicted RBP15.92■□□□□ 0.14
KDM5C-211ENST00000477109 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
KDM5C-211ENST00000477109 ZEB1P37275 1124 aaPredicted RBP15.92■□□□□ 0.14
KDM5C-211ENST00000477109 TOM1L2Q6ZVM7 507 aa15.92■□□□□ 0.14
KDM5C-211ENST00000477109 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
KDM5C-211ENST00000477109 OVOS2A0A0J9YW53 1432 aa15.92■□□□□ 0.14
KDM5C-211ENST00000477109 OVOS2Q6IE36 1432 aa15.92■□□□□ 0.14
KDM5C-211ENST00000477109 SLIT3O75094 1523 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms