RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
SEC22A-205ENST00000477063 KIF1AQ12756 1690 aa17.73■□□□□ 0.43
SEC22A-205ENST00000477063 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
SEC22A-205ENST00000477063 SHPRHQ149N8 1683 aa17.71■□□□□ 0.43
SEC22A-205ENST00000477063 USP31Q70CQ4 1352 aa17.71■□□□□ 0.43
SEC22A-205ENST00000477063 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
SEC22A-205ENST00000477063 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
SEC22A-205ENST00000477063 GGNBP2Q9H3C7 697 aa17.71■□□□□ 0.43
SEC22A-205ENST00000477063 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.43
SEC22A-205ENST00000477063 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
SEC22A-205ENST00000477063 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
SEC22A-205ENST00000477063 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
SEC22A-205ENST00000477063 COG3Q96JB2 828 aa17.7■□□□□ 0.42
SEC22A-205ENST00000477063 OVOS2A0A0J9YW53 1432 aa17.7■□□□□ 0.42
SEC22A-205ENST00000477063 OVOS2Q6IE36 1432 aa17.7■□□□□ 0.42
SEC22A-205ENST00000477063 STRCP1A6NGW2 1772 aa17.69■□□□□ 0.42
SEC22A-205ENST00000477063 MTHFSP49914 203 aa17.69■□□□□ 0.42
SEC22A-205ENST00000477063 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
SEC22A-205ENST00000477063 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
SEC22A-205ENST00000477063 HSPA2P54652 639 aa17.67■□□□□ 0.42
SEC22A-205ENST00000477063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.67■□□□□ 0.42
SEC22A-205ENST00000477063 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
SEC22A-205ENST00000477063 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
SEC22A-205ENST00000477063 COL3A1P02461 1466 aaPredicted RBP17.67■□□□□ 0.42
SEC22A-205ENST00000477063 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
SEC22A-205ENST00000477063 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
SEC22A-205ENST00000477063 PHF8Q9UPP1 1060 aa17.66■□□□□ 0.42
SEC22A-205ENST00000477063 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
SEC22A-205ENST00000477063 TMEM94Q12767 1356 aa17.65■□□□□ 0.42
SEC22A-205ENST00000477063 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
SEC22A-205ENST00000477063 CADPS2Q86UW7 1296 aa17.64■□□□□ 0.41
SEC22A-205ENST00000477063 NME9Q86XW9 330 aa17.64■□□□□ 0.41
SEC22A-205ENST00000477063 PIK3C2AO00443 1686 aa17.63■□□□□ 0.41
SEC22A-205ENST00000477063 C1orf167Q5SNV9 1468 aa17.63■□□□□ 0.41
SEC22A-205ENST00000477063 NUTM2FA1L443 756 aa17.62■□□□□ 0.41
SEC22A-205ENST00000477063 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
SEC22A-205ENST00000477063 MSH6P52701 1360 aa17.62■□□□□ 0.41
SEC22A-205ENST00000477063 MST1RQ04912 1400 aa17.62■□□□□ 0.41
SEC22A-205ENST00000477063 ATF3P18847 181 aa17.61■□□□□ 0.41
SEC22A-205ENST00000477063 PMFBP1Q8TBY8 1022 aa17.61■□□□□ 0.41
SEC22A-205ENST00000477063 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
SEC22A-205ENST00000477063 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
SEC22A-205ENST00000477063 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
SEC22A-205ENST00000477063 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
SEC22A-205ENST00000477063 ESCO1Q5FWF5 840 aa17.58■□□□□ 0.4
SEC22A-205ENST00000477063 MARF1Q9Y4F3 1742 aaKnown RBP17.57■□□□□ 0.4
SEC22A-205ENST00000477063 SOCS7O14512 581 aa17.56■□□□□ 0.4
SEC22A-205ENST00000477063 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
SEC22A-205ENST00000477063 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
SEC22A-205ENST00000477063 PSME1Q06323 249 aa17.55■□□□□ 0.4
SEC22A-205ENST00000477063 CCDC27Q2M243 656 aa17.55■□□□□ 0.4
SEC22A-205ENST00000477063 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
SEC22A-205ENST00000477063 PHRF1Q9P1Y6 1649 aaKnown RBP17.54■□□□□ 0.4
SEC22A-205ENST00000477063 ZNF521Q96K83 1311 aa17.54■□□□□ 0.4
SEC22A-205ENST00000477063 FCHSD2O94868 740 aa17.54■□□□□ 0.4
SEC22A-205ENST00000477063 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
SEC22A-205ENST00000477063 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
SEC22A-205ENST00000477063 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEC22A-205ENST00000477063 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
SEC22A-205ENST00000477063 FLT4P35916 1363 aa17.53■□□□□ 0.4
SEC22A-205ENST00000477063 NLRP6P59044 892 aa17.52■□□□□ 0.4
SEC22A-205ENST00000477063 ABTB2Q8N961 1025 aa17.52■□□□□ 0.4
SEC22A-205ENST00000477063 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
SEC22A-205ENST00000477063 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
SEC22A-205ENST00000477063 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
SEC22A-205ENST00000477063 ALS2Q96Q42 1657 aa17.51■□□□□ 0.39
SEC22A-205ENST00000477063 SLIT3O75094 1523 aa17.51■□□□□ 0.39
SEC22A-205ENST00000477063 NPHP3Q7Z494 1330 aa17.5■□□□□ 0.39
SEC22A-205ENST00000477063 NEFMP07197 916 aa17.5■□□□□ 0.39
SEC22A-205ENST00000477063 IL13P35225 146 aa17.5■□□□□ 0.39
SEC22A-205ENST00000477063 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
SEC22A-205ENST00000477063 APAF1O14727 1248 aa17.49■□□□□ 0.39
SEC22A-205ENST00000477063 NEFLP07196 543 aa17.49■□□□□ 0.39
SEC22A-205ENST00000477063 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
SEC22A-205ENST00000477063 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
SEC22A-205ENST00000477063 RGPD1P0DJD0 1748 aa17.49■□□□□ 0.39
SEC22A-205ENST00000477063 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
SEC22A-205ENST00000477063 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
SEC22A-205ENST00000477063 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
SEC22A-205ENST00000477063 ERICH6BQ5W0A0 696 aa17.48■□□□□ 0.39
SEC22A-205ENST00000477063 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
SEC22A-205ENST00000477063 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
SEC22A-205ENST00000477063 NFAT5O94916 1531 aa17.47■□□□□ 0.39
SEC22A-205ENST00000477063 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
SEC22A-205ENST00000477063 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
SEC22A-205ENST00000477063 USP19O94966 1318 aa17.47■□□□□ 0.39
SEC22A-205ENST00000477063 E9PSI1 815 aa17.46■□□□□ 0.39
SEC22A-205ENST00000477063 FOXO3O43524 673 aa17.46■□□□□ 0.39
SEC22A-205ENST00000477063 RRS1Q15050 365 aaKnown RBP17.46■□□□□ 0.39
SEC22A-205ENST00000477063 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
SEC22A-205ENST00000477063 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
SEC22A-205ENST00000477063 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
SEC22A-205ENST00000477063 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
SEC22A-205ENST00000477063 ABCC6O95255 1503 aa17.46■□□□□ 0.39
SEC22A-205ENST00000477063 MAP3K19Q56UN5 1328 aa17.46■□□□□ 0.38
SEC22A-205ENST00000477063 ARHGEF10O15013 1369 aa17.45■□□□□ 0.38
SEC22A-205ENST00000477063 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
SEC22A-205ENST00000477063 LTN1O94822 1766 aa17.45■□□□□ 0.38
SEC22A-205ENST00000477063 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
SEC22A-205ENST00000477063 TRMT2AQ8IZ69 625 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms