RNA–Protein interactions for RNA: ENST00000477012.5

RNF7-203, Transcript of ring finger protein 7, humanhuman

TSL 1 (best)

Gene RNF7, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-203ENST00000477012 SEPT12Q8IYM1 358 aa23.77■■□□□ 1.4
RNF7-203ENST00000477012 BLMP54132 1417 aaPredicted RBP23.76■■□□□ 1.39
RNF7-203ENST00000477012 PHRF1Q9P1Y6 1649 aaKnown RBP23.75■■□□□ 1.39
RNF7-203ENST00000477012 NGDNQ8NEJ9 315 aaKnown RBP23.75■■□□□ 1.39
RNF7-203ENST00000477012 CCDC9Q9Y3X0 531 aaKnown RBP23.75■■□□□ 1.39
RNF7-203ENST00000477012 ONECUT3O60422 494 aaPredicted RBP23.74■■□□□ 1.39
RNF7-203ENST00000477012 NUDT16Q96DE0 195 aaKnown RBP23.72■■□□□ 1.39
RNF7-203ENST00000477012 BTG4Q9NY30 223 aa23.72■■□□□ 1.39
RNF7-203ENST00000477012 ZRANB1Q9UGI0 708 aa23.71■■□□□ 1.39
RNF7-203ENST00000477012 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
RNF7-203ENST00000477012 KRT27Q7Z3Y8 459 aa23.68■■□□□ 1.38
RNF7-203ENST00000477012 CDK19Q9BWU1 502 aa23.68■■□□□ 1.38
RNF7-203ENST00000477012 POLR3AO14802 1390 aaPredicted RBP23.67■■□□□ 1.38
RNF7-203ENST00000477012 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
RNF7-203ENST00000477012 FAM98CQ17RN3 349 aaKnown RBP23.66■■□□□ 1.38
RNF7-203ENST00000477012 NBPF1Q3BBV0 1214 aa23.66■■□□□ 1.38
RNF7-203ENST00000477012 QRICH2Q9H0J4 1663 aa23.65■■□□□ 1.38
RNF7-203ENST00000477012 DEFB132Q7Z7B7 95 aa23.65■■□□□ 1.38
RNF7-203ENST00000477012 A0A0G2JS52 829 aa23.64■■□□□ 1.37
RNF7-203ENST00000477012 MYT1Q01538 1121 aa23.64■■□□□ 1.37
RNF7-203ENST00000477012 PRDM11Q9NQV5 511 aa23.64■■□□□ 1.37
RNF7-203ENST00000477012 NRKQ7Z2Y5 1582 aa23.64■■□□□ 1.37
RNF7-203ENST00000477012 ACEP12821 1306 aa23.63■■□□□ 1.37
RNF7-203ENST00000477012 SPATA31A5Q5VU36 1347 aa23.63■■□□□ 1.37
RNF7-203ENST00000477012 SPATA31A7Q8IWB4 1347 aa23.63■■□□□ 1.37
RNF7-203ENST00000477012 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
RNF7-203ENST00000477012 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
RNF7-203ENST00000477012 CCDC61Q9Y6R9 512 aa23.62■■□□□ 1.37
RNF7-203ENST00000477012 SF3B2Q13435 895 aaKnown RBP23.61■■□□□ 1.37
RNF7-203ENST00000477012 PLEKHG3A1L390 1219 aa23.6■■□□□ 1.37
RNF7-203ENST00000477012 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
RNF7-203ENST00000477012 NUTM2GQ5VZR2 741 aa23.59■■□□□ 1.37
RNF7-203ENST00000477012 CHRNA2Q15822 529 aa23.58■■□□□ 1.37
RNF7-203ENST00000477012 TNS1Q9HBL0 1735 aaKnown RBP23.58■■□□□ 1.37
RNF7-203ENST00000477012 TRPM1Q7Z4N2 1603 aa23.58■■□□□ 1.36
RNF7-203ENST00000477012 CENPJQ9HC77 1338 aaPredicted RBP23.58■■□□□ 1.36
RNF7-203ENST00000477012 PPIP5K1Q6PFW1 1433 aa23.57■■□□□ 1.36
RNF7-203ENST00000477012 LMO7Q8WWI1 1683 aa23.57■■□□□ 1.36
RNF7-203ENST00000477012 ZC3H6P61129 1189 aaKnown RBP23.55■■□□□ 1.36
RNF7-203ENST00000477012 SPATA31A1Q5TZJ5 1347 aa23.55■■□□□ 1.36
RNF7-203ENST00000477012 USP19O94966 1318 aa23.54■■□□□ 1.36
RNF7-203ENST00000477012 SRPK2P78362 688 aaKnown RBP23.53■■□□□ 1.36
RNF7-203ENST00000477012 FAM182BQ5T319 152 aa23.53■■□□□ 1.36
RNF7-203ENST00000477012 CAMTA1Q9Y6Y1 1673 aa23.53■■□□□ 1.36
RNF7-203ENST00000477012 ABTB2Q8N961 1025 aa23.52■■□□□ 1.36
RNF7-203ENST00000477012 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
RNF7-203ENST00000477012 CABP2Q9NPB3 220 aa23.52■■□□□ 1.36
RNF7-203ENST00000477012 STRN4Q9NRL3 753 aa23.52■■□□□ 1.36
RNF7-203ENST00000477012 SSH2Q76I76 1423 aa23.51■■□□□ 1.35
RNF7-203ENST00000477012 BAG6P46379 1132 aa23.51■■□□□ 1.35
RNF7-203ENST00000477012 CPDO75976 1380 aa23.51■■□□□ 1.35
RNF7-203ENST00000477012 LRP5O75197 1615 aa23.5■■□□□ 1.35
RNF7-203ENST00000477012 BRD4O60885 1362 aaPredicted RBP23.48■■□□□ 1.35
RNF7-203ENST00000477012 DISP2A7MBM2 1401 aa23.48■■□□□ 1.35
RNF7-203ENST00000477012 PIK3C2AO00443 1686 aa23.48■■□□□ 1.35
RNF7-203ENST00000477012 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
RNF7-203ENST00000477012 USP6P35125 1406 aa23.47■■□□□ 1.35
RNF7-203ENST00000477012 AKAP12Q02952 1782 aa23.45■■□□□ 1.34
RNF7-203ENST00000477012 SLIT3O75094 1523 aa23.45■■□□□ 1.34
RNF7-203ENST00000477012 EN1Q05925 392 aaPredicted RBP23.45■■□□□ 1.34
RNF7-203ENST00000477012 NLRP13Q86W25 1043 aa23.45■■□□□ 1.34
RNF7-203ENST00000477012 CABP1Q9NZU7 370 aa23.44■■□□□ 1.34
RNF7-203ENST00000477012 USP35Q9P2H5 1018 aa23.44■■□□□ 1.34
RNF7-203ENST00000477012 PARP4Q9UKK3 1724 aaKnown RBP23.44■■□□□ 1.34
RNF7-203ENST00000477012 COL5A2P05997 1499 aaPredicted RBP23.43■■□□□ 1.34
RNF7-203ENST00000477012 GCP02774 474 aa23.43■■□□□ 1.34
RNF7-203ENST00000477012 EVA1CP58658 441 aa23.43■■□□□ 1.34
RNF7-203ENST00000477012 LARP1Q6PKG0 1096 aaKnown RBP23.43■■□□□ 1.34
RNF7-203ENST00000477012 BARGINQ6ZT62 677 aa23.43■■□□□ 1.34
RNF7-203ENST00000477012 PSDA5PKW4 1024 aaPredicted RBP23.41■■□□□ 1.34
RNF7-203ENST00000477012 COL18A1P39060 1754 aa23.41■■□□□ 1.34
RNF7-203ENST00000477012 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
RNF7-203ENST00000477012 FAM196AQ6ZSG2 479 aa23.4■■□□□ 1.34
RNF7-203ENST00000477012 RREB1Q92766 1687 aa23.4■■□□□ 1.34
RNF7-203ENST00000477012 EVC2Q86UK5 1308 aa23.39■■□□□ 1.34
RNF7-203ENST00000477012 WNK3Q9BYP7 1800 aa23.39■■□□□ 1.33
RNF7-203ENST00000477012 TCP11L2Q8N4U5 519 aa23.39■■□□□ 1.33
RNF7-203ENST00000477012 TRIM37O94972 964 aa23.38■■□□□ 1.33
RNF7-203ENST00000477012 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
RNF7-203ENST00000477012 NLRP6P59044 892 aa23.37■■□□□ 1.33
RNF7-203ENST00000477012 CRB1P82279 1406 aa23.36■■□□□ 1.33
RNF7-203ENST00000477012 EZH2Q15910 746 aaKnown RBP23.36■■□□□ 1.33
RNF7-203ENST00000477012 RGPD5Q99666 1765 aa23.36■■□□□ 1.33
RNF7-203ENST00000477012 LRRC37A3O60309 1634 aa23.36■■□□□ 1.33
RNF7-203ENST00000477012 NUP188Q5SRE5 1749 aa23.36■■□□□ 1.33
RNF7-203ENST00000477012 PDE3BQ13370 1112 aa23.35■■□□□ 1.33
RNF7-203ENST00000477012 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
RNF7-203ENST00000477012 MON2Q7Z3U7 1717 aa23.35■■□□□ 1.33
RNF7-203ENST00000477012 AATKQ6ZMQ8 1374 aa23.35■■□□□ 1.33
RNF7-203ENST00000477012 PEAK1Q9H792 1746 aa23.34■■□□□ 1.33
RNF7-203ENST00000477012 CAMKK2Q96RR4 588 aa23.34■■□□□ 1.33
RNF7-203ENST00000477012 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
RNF7-203ENST00000477012 SBF2Q86WG5 1849 aa23.33■■□□□ 1.32
RNF7-203ENST00000477012 PARD3Q8TEW0 1356 aa23.32■■□□□ 1.32
RNF7-203ENST00000477012 R3HDM1Q15032 1099 aaKnown RBP23.32■■□□□ 1.32
RNF7-203ENST00000477012 CPSF1Q10570 1443 aaKnown RBP23.31■■□□□ 1.32
RNF7-203ENST00000477012 TTC21BQ7Z4L5 1316 aa23.31■■□□□ 1.32
RNF7-203ENST00000477012 APBA3O96018 575 aa23.3■■□□□ 1.32
RNF7-203ENST00000477012 NFAT5O94916 1531 aa23.28■■□□□ 1.32
RNF7-203ENST00000477012 SBNO2Q9Y2G9 1366 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms