RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MYBBP1AQ9BQG0 1328 aaKnown RBP27.67■■■□□ 2.02
CDHR3-210ENST00000474330 AKAP12Q02952 1782 aa27.65■■■□□ 2.02
CDHR3-210ENST00000474330 PLEKHG3A1L390 1219 aa27.65■■■□□ 2.02
CDHR3-210ENST00000474330 RGS17Q9UGC6 210 aaPredicted RBP27.65■■■□□ 2.02
CDHR3-210ENST00000474330 SOS2Q07890 1332 aaPredicted RBP27.65■■■□□ 2.02
CDHR3-210ENST00000474330 CGNL1Q0VF96 1302 aa27.65■■■□□ 2.02
CDHR3-210ENST00000474330 LRRC59Q96AG4 307 aaKnown RBP27.64■■■□□ 2.02
CDHR3-210ENST00000474330 SPATA31A6Q5VVP1 1343 aa27.63■■■□□ 2.01
CDHR3-210ENST00000474330 LRP6O75581 1613 aa27.62■■■□□ 2.01
CDHR3-210ENST00000474330 ZNF692Q9BU19 519 aaPredicted RBP27.62■■■□□ 2.01
CDHR3-210ENST00000474330 PHF23Q9BUL5 403 aaPredicted RBP27.62■■■□□ 2.01
CDHR3-210ENST00000474330 NSD2O96028 1365 aa27.62■■■□□ 2.01
CDHR3-210ENST00000474330 MON2Q7Z3U7 1717 aa27.62■■■□□ 2.01
CDHR3-210ENST00000474330 CCDC184Q52MB2 194 aa27.61■■■□□ 2.01
CDHR3-210ENST00000474330 FOXO3O43524 673 aa27.6■■■□□ 2.01
CDHR3-210ENST00000474330 MRS2Q9HD23 443 aa27.59■■■□□ 2.01
CDHR3-210ENST00000474330 BRD4O60885 1362 aaPredicted RBP27.58■■■□□ 2.01
CDHR3-210ENST00000474330 KIF1AQ12756 1690 aa27.58■■■□□ 2.01
CDHR3-210ENST00000474330 NLRP13Q86W25 1043 aa27.58■■■□□ 2.01
CDHR3-210ENST00000474330 PXDNQ92626 1479 aa27.58■■■□□ 2.01
CDHR3-210ENST00000474330 EDC4Q6P2E9 1401 aaKnown RBP27.58■■■□□ 2
CDHR3-210ENST00000474330 PNPLA6Q8IY17 1366 aa27.57■■■□□ 2
CDHR3-210ENST00000474330 ACEP12821 1306 aa27.57■■■□□ 2
CDHR3-210ENST00000474330 NPHP3Q7Z494 1330 aa27.57■■■□□ 2
CDHR3-210ENST00000474330 KIF20BQ96Q89 1820 aa27.55■■■□□ 2
CDHR3-210ENST00000474330 ANKRD26Q9UPS8 1709 aa27.55■■■□□ 2
CDHR3-210ENST00000474330 POLR3AO14802 1390 aaPredicted RBP27.55■■■□□ 2
CDHR3-210ENST00000474330 XPCQ01831 940 aaPredicted RBP27.54■■■□□ 2
CDHR3-210ENST00000474330 FYB1O15117 783 aa27.53■■■□□ 2
CDHR3-210ENST00000474330 PPP2R1AP30153 589 aa27.53■■■□□ 2
CDHR3-210ENST00000474330 PMFBP1Q8TBY8 1022 aa27.53■■■□□ 2
CDHR3-210ENST00000474330 PHF8Q9UPP1 1060 aa27.53■■■□□ 2
CDHR3-210ENST00000474330 MORC1Q86VD1 984 aa27.52■■■□□ 2
CDHR3-210ENST00000474330 NUTM2BA6NNL0 878 aaPredicted RBP27.52■■■□□ 2
CDHR3-210ENST00000474330 NUTM2EB1AL46 878 aaPredicted RBP27.52■■■□□ 2
CDHR3-210ENST00000474330 NUTM2AQ8IVF1 878 aaPredicted RBP27.52■■■□□ 2
CDHR3-210ENST00000474330 NRKQ7Z2Y5 1582 aa27.52■■■□□ 2
CDHR3-210ENST00000474330 NGDNQ8NEJ9 315 aaKnown RBP27.51■■□□□ 1.99
CDHR3-210ENST00000474330 USP6P35125 1406 aa27.51■■□□□ 1.99
CDHR3-210ENST00000474330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.49■■□□□ 1.993e-7■■■■□ 24.1
CDHR3-210ENST00000474330 COL22A1Q8NFW1 1626 aaPredicted RBP27.48■■□□□ 1.99
CDHR3-210ENST00000474330 POTEAQ6S8J7 498 aa27.48■■□□□ 1.99
CDHR3-210ENST00000474330 YTHDC1Q96MU7 727 aaKnown RBP27.48■■□□□ 1.99
CDHR3-210ENST00000474330 GGNBP2Q9H3C7 697 aa27.48■■□□□ 1.99
CDHR3-210ENST00000474330 SSH2Q76I76 1423 aa27.47■■□□□ 1.99
CDHR3-210ENST00000474330 KRT28Q7Z3Y7 464 aa27.47■■□□□ 1.99
CDHR3-210ENST00000474330 MEX3CQ5U5Q3 659 aaKnown RBP27.45■■□□□ 1.98
CDHR3-210ENST00000474330 TTC21BQ7Z4L5 1316 aa27.44■■□□□ 1.98
CDHR3-210ENST00000474330 PNISRQ8TF01 805 aaKnown RBP27.43■■□□□ 1.98
CDHR3-210ENST00000474330 SPATA31A3Q5VYP0 1347 aa27.42■■□□□ 1.98
CDHR3-210ENST00000474330 NME9Q86XW9 330 aa27.41■■□□□ 1.98
CDHR3-210ENST00000474330 TTC21AQ8NDW8 1320 aa27.41■■□□□ 1.98
CDHR3-210ENST00000474330 SOCS7O14512 581 aa27.4■■□□□ 1.98
CDHR3-210ENST00000474330 PSME1Q06323 249 aa27.4■■□□□ 1.98
CDHR3-210ENST00000474330 FAM9BQ8IZU0 186 aa27.4■■□□□ 1.98
CDHR3-210ENST00000474330 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
CDHR3-210ENST00000474330 TNNT2P45379 298 aaPredicted RBP27.38■■□□□ 1.97
CDHR3-210ENST00000474330 ADAMTS2O95450 1211 aa27.37■■□□□ 1.97
CDHR3-210ENST00000474330 SBNO1A3KN83 1393 aa27.36■■□□□ 1.97
CDHR3-210ENST00000474330 COG3Q96JB2 828 aa27.36■■□□□ 1.97
CDHR3-210ENST00000474330 C8orf37Q96NL8 207 aa27.35■■□□□ 1.97
CDHR3-210ENST00000474330 PIK3C2AO00443 1686 aa27.35■■□□□ 1.97
CDHR3-210ENST00000474330 TNS3Q68CZ2 1445 aa27.34■■□□□ 1.97
CDHR3-210ENST00000474330 ZRANB1Q9UGI0 708 aa27.34■■□□□ 1.97
CDHR3-210ENST00000474330 AFF2P51816 1311 aa27.34■■□□□ 1.97
CDHR3-210ENST00000474330 MARF1Q9Y4F3 1742 aaKnown RBP27.33■■□□□ 1.97
CDHR3-210ENST00000474330 OVOS2A0A0J9YW53 1432 aa27.33■■□□□ 1.97
CDHR3-210ENST00000474330 OVOS2Q6IE36 1432 aa27.33■■□□□ 1.97
CDHR3-210ENST00000474330 MTHFSP49914 203 aa27.33■■□□□ 1.97
CDHR3-210ENST00000474330 ZNF772Q68DY9 489 aaPredicted RBP27.33■■□□□ 1.97
CDHR3-210ENST00000474330 USP31Q70CQ4 1352 aa27.32■■□□□ 1.96
CDHR3-210ENST00000474330 ALS2Q96Q42 1657 aa27.31■■□□□ 1.96
CDHR3-210ENST00000474330 USP54Q70EL1 1684 aa27.3■■□□□ 1.96
CDHR3-210ENST00000474330 AATKQ6ZMQ8 1374 aa27.3■■□□□ 1.96
CDHR3-210ENST00000474330 PAK3O75914 559 aaPredicted RBP27.3■■□□□ 1.96
CDHR3-210ENST00000474330 MAP2P11137 1827 aaKnown RBP27.29■■□□□ 1.96
CDHR3-210ENST00000474330 NGLY1Q96IV0 654 aa27.29■■□□□ 1.96
CDHR3-210ENST00000474330 CABLES1Q8TDN4 633 aa27.27■■□□□ 1.96
CDHR3-210ENST00000474330 INSRP06213 1382 aa27.26■■□□□ 1.95
CDHR3-210ENST00000474330 LMOD2Q6P5Q4 547 aa27.26■■□□□ 1.95
CDHR3-210ENST00000474330 FNBP4Q8N3X1 1017 aaPredicted RBP27.26■■□□□ 1.95
CDHR3-210ENST00000474330 CFAP53Q96M91 514 aa27.26■■□□□ 1.95
CDHR3-210ENST00000474330 ARHGEF10O15013 1369 aa27.25■■□□□ 1.95
CDHR3-210ENST00000474330 ABCA3Q99758 1704 aa27.25■■□□□ 1.95
CDHR3-210ENST00000474330 ABTB2Q8N961 1025 aa27.25■■□□□ 1.95
CDHR3-210ENST00000474330 POLKQ9UBT6 870 aa27.23■■□□□ 1.95
CDHR3-210ENST00000474330 CENPBP07199 599 aaPredicted RBP27.23■■□□□ 1.95
CDHR3-210ENST00000474330 WDR43Q15061 677 aaKnown RBP eCLIP27.23■■□□□ 1.95
CDHR3-210ENST00000474330 SMG6Q86US8 1419 aaKnown RBP27.22■■□□□ 1.95
CDHR3-210ENST00000474330 NLRP6P59044 892 aa27.22■■□□□ 1.95
CDHR3-210ENST00000474330 HNRNPUQ00839 825 aaKnown RBP eCLIP27.22■■□□□ 1.95
CDHR3-210ENST00000474330 QTRT2Q9H974 415 aaKnown RBP27.22■■□□□ 1.95
CDHR3-210ENST00000474330 PLEKHG5O94827 1062 aa27.21■■□□□ 1.95
CDHR3-210ENST00000474330 FBLN1P23142 703 aa27.21■■□□□ 1.95
CDHR3-210ENST00000474330 USP21Q9UK80 565 aa27.19■■□□□ 1.94
CDHR3-210ENST00000474330 ADAMTS8Q9UP79 889 aa27.19■■□□□ 1.94
CDHR3-210ENST00000474330 CRYBG1Q9Y4K1 1723 aa27.19■■□□□ 1.94
CDHR3-210ENST00000474330 COL3A1P02461 1466 aaPredicted RBP27.19■■□□□ 1.94
CDHR3-210ENST00000474330 BCL9LQ86UU0 1499 aa27.19■■□□□ 1.94
CDHR3-210ENST00000474330 RXRBP28702 533 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms