RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	LYPD8	Q6UX82	237 aa		9.26	□□□□□ -0.93
TMEM50B-208	ENST00000474272	SENP2	Q9HC62	589 aa		9.26	□□□□□ -0.93
TMEM50B-208	ENST00000474272	MAP10	Q9P2G4	905 aa		9.26	□□□□□ -0.93
TMEM50B-208	ENST00000474272	TRIM46	Q7Z4K8	759 aa		9.25	□□□□□ -0.93
TMEM50B-208	ENST00000474272	SLC24A3	Q9HC58	644 aa		9.25	□□□□□ -0.93
TMEM50B-208	ENST00000474272	PER1	O15534	1290 aa	Predicted RBP	9.24	□□□□□ -0.93
TMEM50B-208	ENST00000474272	PDE4D	Q08499	809 aa		9.24	□□□□□ -0.93
TMEM50B-208	ENST00000474272	TSC1	Q92574	1164 aa		9.24	□□□□□ -0.93
TMEM50B-208	ENST00000474272	ZBTB3	Q9H5J0	574 aa		9.24	□□□□□ -0.93
TMEM50B-208	ENST00000474272	LIMD1	Q9UGP4	676 aa		9.24	□□□□□ -0.93
TMEM50B-208	ENST00000474272	GJA5	P36382	358 aa		9.23	□□□□□ -0.93
TMEM50B-208	ENST00000474272	DIXDC1	Q155Q3	683 aa		9.23	□□□□□ -0.93
TMEM50B-208	ENST00000474272	QPCT	Q16769	361 aa		9.23	□□□□□ -0.93
TMEM50B-208	ENST00000474272	FOXJ1	Q92949	421 aa		9.23	□□□□□ -0.93
TMEM50B-208	ENST00000474272	TERT	O14746	1132 aa	Known RBP	9.22	□□□□□ -0.93
TMEM50B-208	ENST00000474272	VARS	P26640	1264 aa	Known RBP	9.21	□□□□□ -0.94
TMEM50B-208	ENST00000474272	MYSM1	Q5VVJ2	828 aa		9.21	□□□□□ -0.94
TMEM50B-208	ENST00000474272	KIFC2	Q96AC6	838 aa		9.21	□□□□□ -0.94
TMEM50B-208	ENST00000474272	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.2	□□□□□ -0.94
TMEM50B-208	ENST00000474272	NUTM2E	B1AL46	878 aa	Predicted RBP	9.2	□□□□□ -0.94
TMEM50B-208	ENST00000474272	NNT	Q13423	1086 aa		9.2	□□□□□ -0.94
TMEM50B-208	ENST00000474272	ARID5B	Q14865	1188 aa		9.2	□□□□□ -0.94
TMEM50B-208	ENST00000474272	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.2	□□□□□ -0.94
TMEM50B-208	ENST00000474272	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.2	□□□□□ -0.94
TMEM50B-208	ENST00000474272	F12	P00748	615 aa	Predicted RBP	9.19	□□□□□ -0.94
TMEM50B-208	ENST00000474272	VEGFB	P49765	207 aa		9.18	□□□□□ -0.94
TMEM50B-208	ENST00000474272	ZFP42	Q96MM3	310 aa		9.18	□□□□□ -0.94
TMEM50B-208	ENST00000474272	PLEKHG3	A1L390	1219 aa		9.17	□□□□□ -0.94
TMEM50B-208	ENST00000474272	AGER	Q15109	404 aa		9.17	□□□□□ -0.94
TMEM50B-208	ENST00000474272	C4orf48	Q5BLP8	95 aa		9.17	□□□□□ -0.94
TMEM50B-208	ENST00000474272	RTL5	Q5HYW3	569 aa	Predicted RBP	9.17	□□□□□ -0.94
TMEM50B-208	ENST00000474272	PRPF38B	Q5VTL8	546 aa	Known RBP	9.17	□□□□□ -0.94
TMEM50B-208	ENST00000474272	POLR3E	Q9NVU0	708 aa		9.17	□□□□□ -0.94
TMEM50B-208	ENST00000474272	WDR4	P57081	412 aa	Known RBP	9.16	□□□□□ -0.94
TMEM50B-208	ENST00000474272	FAM174A	Q8TBP5	190 aa		9.16	□□□□□ -0.94
TMEM50B-208	ENST00000474272	LILRB3	O75022	631 aa		9.15	□□□□□ -0.94
TMEM50B-208	ENST00000474272	TIMP2	P16035	220 aa		9.15	□□□□□ -0.94
TMEM50B-208	ENST00000474272	SOBP	A7XYQ1	873 aa		9.14	□□□□□ -0.95
TMEM50B-208	ENST00000474272	PURB	Q96QR8	312 aa	Known RBP	9.14	□□□□□ -0.95
TMEM50B-208	ENST00000474272	WIPF1	O43516	503 aa		9.13	□□□□□ -0.95
TMEM50B-208	ENST00000474272	ADH1C	P00326	375 aa		9.13	□□□□□ -0.95
TMEM50B-208	ENST00000474272	MPND	Q8N594	471 aa		9.13	□□□□□ -0.95
TMEM50B-208	ENST00000474272	KLF16	Q9BXK1	252 aa	Predicted RBP	9.13	□□□□□ -0.95
TMEM50B-208	ENST00000474272	ZFAND3	Q9H8U3	227 aa		9.13	□□□□□ -0.95
TMEM50B-208	ENST00000474272	NXF1	Q9UBU9	619 aa	Known RBP	9.13	□□□□□ -0.95
TMEM50B-208	ENST00000474272	NR3C2	P08235	984 aa		9.12	□□□□□ -0.95
TMEM50B-208	ENST00000474272	MRPL14	Q6P1L8	145 aa	Known RBP	9.12	□□□□□ -0.95
TMEM50B-208	ENST00000474272	CDK15	Q96Q40	435 aa		9.12	□□□□□ -0.95
TMEM50B-208	ENST00000474272	GRM5	P41594	1212 aa		9.11	□□□□□ -0.95
TMEM50B-208	ENST00000474272	ITPKC	Q96DU7	683 aa		9.11	□□□□□ -0.95
TMEM50B-208	ENST00000474272	ZIC2	O95409	532 aa	Predicted RBP	9.1	□□□□□ -0.95
TMEM50B-208	ENST00000474272	CLK2	P49760	499 aa	Known RBP	9.1	□□□□□ -0.95
TMEM50B-208	ENST00000474272	GMPR	P36959	345 aa		9.09	□□□□□ -0.95
TMEM50B-208	ENST00000474272	C6orf118	Q5T5N4	469 aa		9.09	□□□□□ -0.95
TMEM50B-208	ENST00000474272	BPHL	Q86WA6	291 aa	Predicted RBP	9.09	□□□□□ -0.95
TMEM50B-208	ENST00000474272	SLC16A10	Q8TF71	515 aa		9.09	□□□□□ -0.95
TMEM50B-208	ENST00000474272	MAGEB6P1	A0A0J9YX57	407 aa		9.08	□□□□□ -0.96
TMEM50B-208	ENST00000474272	INSM1	Q01101	510 aa	Predicted RBP	9.08	□□□□□ -0.96
TMEM50B-208	ENST00000474272	CTDSPL2	Q05D32	466 aa		9.08	□□□□□ -0.96
TMEM50B-208	ENST00000474272	SCARF1	Q14162	830 aa		9.08	□□□□□ -0.96
TMEM50B-208	ENST00000474272	TUSC1	Q2TAM9	212 aa		9.08	□□□□□ -0.96
TMEM50B-208	ENST00000474272	FBXO31	Q5XUX0	539 aa	Predicted RBP	9.08	□□□□□ -0.96
TMEM50B-208	ENST00000474272	HELB	Q8NG08	1087 aa	Predicted RBP	9.08	□□□□□ -0.96
TMEM50B-208	ENST00000474272	CARD14	Q9BXL6	1004 aa		9.07	□□□□□ -0.96
TMEM50B-208	ENST00000474272	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.07	□□□□□ -0.96
TMEM50B-208	ENST00000474272	ERBB4	Q15303	1308 aa		9.06	□□□□□ -0.96
TMEM50B-208	ENST00000474272	NR5A1	Q13285	461 aa		9.06	□□□□□ -0.96
TMEM50B-208	ENST00000474272	STK17A	Q9UEE5	414 aa		9.06	□□□□□ -0.96
TMEM50B-208	ENST00000474272	SH3RF1	Q7Z6J0	888 aa		9.05	□□□□□ -0.96
TMEM50B-208	ENST00000474272	PROCA1	Q8NCQ7	364 aa	Predicted RBP	9.05	□□□□□ -0.96
TMEM50B-208	ENST00000474272	LRRN4	Q8WUT4	740 aa		9.05	□□□□□ -0.96
TMEM50B-208	ENST00000474272	RSPH6A	Q9H0K4	717 aa		9.05	□□□□□ -0.96
TMEM50B-208	ENST00000474272		H3BM21	787 aa		9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	SLC24A1	O60721	1099 aa		9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	FSHR	P23945	695 aa		9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	VASH1	Q7L8A9	365 aa	Predicted RBP	9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	SH3BP5L	Q7L8J4	393 aa		9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	ARMC2	Q8NEN0	867 aa		9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	C1QTNF2	Q9BXJ5	285 aa		9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	ATP1B4	Q9UN42	357 aa	Predicted RBP	9.04	□□□□□ -0.96
TMEM50B-208	ENST00000474272	IRF7	Q92985	503 aa		9.03	□□□□□ -0.96
TMEM50B-208	ENST00000474272	BMP2	P12643	396 aa		9.02	□□□□□ -0.97
TMEM50B-208	ENST00000474272	NBPF14	Q5TI25	921 aa		9.02	□□□□□ -0.97
TMEM50B-208	ENST00000474272	FAM117A	Q9C073	453 aa		9.02	□□□□□ -0.97
TMEM50B-208	ENST00000474272	KDM4C	Q9H3R0	1056 aa		9.01	□□□□□ -0.97
TMEM50B-208	ENST00000474272	MAN1A2	O60476	641 aa		9	□□□□□ -0.97
TMEM50B-208	ENST00000474272	LOR	P23490	312 aa	Predicted RBP	9	□□□□□ -0.97
TMEM50B-208	ENST00000474272	NPAS3	Q8IXF0	933 aa		9	□□□□□ -0.97
TMEM50B-208	ENST00000474272	NR6A1	Q15406	480 aa		8.99	□□□□□ -0.97
TMEM50B-208	ENST00000474272	SKIV2L	Q15477	1246 aa	Known RBP	8.99	□□□□□ -0.97
TMEM50B-208	ENST00000474272	ERFE	Q4G0M1	354 aa		8.99	□□□□□ -0.97
TMEM50B-208	ENST00000474272	LINC00528	Q8N1L1	170 aa		8.99	□□□□□ -0.97
TMEM50B-208	ENST00000474272	TRMT44	Q8IYL2	757 aa	Known RBP	8.98	□□□□□ -0.97
TMEM50B-208	ENST00000474272	MEIOB	Q8N635	442 aa		8.98	□□□□□ -0.97
TMEM50B-208	ENST00000474272	UPP2	O95045	317 aa		8.97	□□□□□ -0.97
TMEM50B-208	ENST00000474272	CBLB	Q13191	982 aa		8.97	□□□□□ -0.97
TMEM50B-208	ENST00000474272	CCDC116	Q8IYX3	515 aa		8.97	□□□□□ -0.97
TMEM50B-208	ENST00000474272	ARHGAP9	Q9BRR9	750 aa		8.97	□□□□□ -0.97
TMEM50B-208	ENST00000474272	MAP4K5	Q9Y4K4	846 aa		8.97	□□□□□ -0.97
TMEM50B-208	ENST00000474272	AP1G2	O75843	785 aa		8.96	□□□□□ -0.98

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