RNA–Protein interactions for RNA: ENST00000474270.1

ABCD4-207, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-207ENST00000474270 PHRF1Q9P1Y6 1649 aaKnown RBP18.51■□□□□ 0.55
ABCD4-207ENST00000474270 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
ABCD4-207ENST00000474270 VPS72Q15906 364 aa18.5■□□□□ 0.55
ABCD4-207ENST00000474270 ARHGEF10O15013 1369 aa18.5■□□□□ 0.55
ABCD4-207ENST00000474270 EIF3AQ14152 1382 aaKnown RBP18.5■□□□□ 0.55
ABCD4-207ENST00000474270 WASLO00401 505 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-207ENST00000474270 A0A0G2JS52 829 aa18.48■□□□□ 0.55
ABCD4-207ENST00000474270 MYT1Q01538 1121 aa18.48■□□□□ 0.55
ABCD4-207ENST00000474270 SF3B2Q13435 895 aaKnown RBP18.48■□□□□ 0.55
ABCD4-207ENST00000474270 DEFB132Q7Z7B7 95 aa18.48■□□□□ 0.55
ABCD4-207ENST00000474270 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
ABCD4-207ENST00000474270 BLMP54132 1417 aaPredicted RBP18.48■□□□□ 0.55
ABCD4-207ENST00000474270 ATP7BP35670 1465 aa18.47■□□□□ 0.55
ABCD4-207ENST00000474270 GPRASP1Q5JY77 1395 aa18.47■□□□□ 0.55
ABCD4-207ENST00000474270 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
ABCD4-207ENST00000474270 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
ABCD4-207ENST00000474270 KRT27Q7Z3Y8 459 aa18.45■□□□□ 0.54
ABCD4-207ENST00000474270 NGDNQ8NEJ9 315 aaKnown RBP18.45■□□□□ 0.54
ABCD4-207ENST00000474270 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
ABCD4-207ENST00000474270 SIN3AQ96ST3 1273 aa18.44■□□□□ 0.54
ABCD4-207ENST00000474270 SRCAPQ6ZRS2 3230 aa18.44■□□□□ 0.54
ABCD4-207ENST00000474270 TRPM1Q7Z4N2 1603 aa18.43■□□□□ 0.54
ABCD4-207ENST00000474270 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
ABCD4-207ENST00000474270 BTG4Q9NY30 223 aa18.43■□□□□ 0.54
ABCD4-207ENST00000474270 NBPF1Q3BBV0 1214 aa18.42■□□□□ 0.54
ABCD4-207ENST00000474270 NUDT16Q96DE0 195 aaKnown RBP18.42■□□□□ 0.54
ABCD4-207ENST00000474270 ONECUT3O60422 494 aaPredicted RBP18.41■□□□□ 0.54
ABCD4-207ENST00000474270 FAM98CQ17RN3 349 aaKnown RBP18.41■□□□□ 0.54
ABCD4-207ENST00000474270 CDK19Q9BWU1 502 aa18.4■□□□□ 0.54
ABCD4-207ENST00000474270 RGPD1P0DJD0 1748 aa18.37■□□□□ 0.53
ABCD4-207ENST00000474270 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
ABCD4-207ENST00000474270 NRKQ7Z2Y5 1582 aa18.36■□□□□ 0.53
ABCD4-207ENST00000474270 THSD7AQ9UPZ6 1657 aa18.35■□□□□ 0.53
ABCD4-207ENST00000474270 ACEP12821 1306 aa18.35■□□□□ 0.53
ABCD4-207ENST00000474270 BAG6P46379 1132 aa18.35■□□□□ 0.53
ABCD4-207ENST00000474270 FAM182BQ5T319 152 aa18.35■□□□□ 0.53
ABCD4-207ENST00000474270 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
ABCD4-207ENST00000474270 AKAP12Q02952 1782 aa18.34■□□□□ 0.53
ABCD4-207ENST00000474270 POLR3AO14802 1390 aaPredicted RBP18.33■□□□□ 0.53
ABCD4-207ENST00000474270 RGPD5Q99666 1765 aa18.33■□□□□ 0.53
ABCD4-207ENST00000474270 SPATA31A5Q5VU36 1347 aa18.33■□□□□ 0.53
ABCD4-207ENST00000474270 SPATA31A7Q8IWB4 1347 aa18.33■□□□□ 0.53
ABCD4-207ENST00000474270 TNS1Q9HBL0 1735 aaKnown RBP18.33■□□□□ 0.52
ABCD4-207ENST00000474270 PSDA5PKW4 1024 aaPredicted RBP18.33■□□□□ 0.52
ABCD4-207ENST00000474270 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
ABCD4-207ENST00000474270 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
ABCD4-207ENST00000474270 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
ABCD4-207ENST00000474270 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
ABCD4-207ENST00000474270 KIAA0232Q92628 1395 aa18.31■□□□□ 0.52
ABCD4-207ENST00000474270 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
ABCD4-207ENST00000474270 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
ABCD4-207ENST00000474270 STRN4Q9NRL3 753 aa18.31■□□□□ 0.52
ABCD4-207ENST00000474270 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
ABCD4-207ENST00000474270 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
ABCD4-207ENST00000474270 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
ABCD4-207ENST00000474270 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
ABCD4-207ENST00000474270 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
ABCD4-207ENST00000474270 PIK3C2AO00443 1686 aa18.29■□□□□ 0.52
ABCD4-207ENST00000474270 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
ABCD4-207ENST00000474270 WNK3Q9BYP7 1800 aa18.27■□□□□ 0.52
ABCD4-207ENST00000474270 CAMTA1Q9Y6Y1 1673 aa18.26■□□□□ 0.51
ABCD4-207ENST00000474270 ABTB2Q8N961 1025 aa18.26■□□□□ 0.51
ABCD4-207ENST00000474270 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
ABCD4-207ENST00000474270 SPATA31A1Q5TZJ5 1347 aa18.25■□□□□ 0.51
ABCD4-207ENST00000474270 EVA1CP58658 441 aa18.24■□□□□ 0.51
ABCD4-207ENST00000474270 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
ABCD4-207ENST00000474270 TRIM37O94972 964 aa18.23■□□□□ 0.51
ABCD4-207ENST00000474270 COL18A1P39060 1754 aa18.22■□□□□ 0.51
ABCD4-207ENST00000474270 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
ABCD4-207ENST00000474270 R3HDM1Q15032 1099 aaKnown RBP18.22■□□□□ 0.51
ABCD4-207ENST00000474270 EZH2Q15910 746 aaKnown RBP18.22■□□□□ 0.51
ABCD4-207ENST00000474270 PARP4Q9UKK3 1724 aaKnown RBP18.22■□□□□ 0.51
ABCD4-207ENST00000474270 SSH2Q76I76 1423 aa18.22■□□□□ 0.51
ABCD4-207ENST00000474270 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
ABCD4-207ENST00000474270 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
ABCD4-207ENST00000474270 USP6P35125 1406 aa18.21■□□□□ 0.51
ABCD4-207ENST00000474270 USP19O94966 1318 aa18.21■□□□□ 0.51
ABCD4-207ENST00000474270 ZBTB7CA1YPR0 619 aa18.2■□□□□ 0.5
ABCD4-207ENST00000474270 FAM196AQ6ZSG2 479 aa18.2■□□□□ 0.5
ABCD4-207ENST00000474270 LRP5O75197 1615 aa18.2■□□□□ 0.5
ABCD4-207ENST00000474270 SLIT3O75094 1523 aa18.19■□□□□ 0.5
ABCD4-207ENST00000474270 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
ABCD4-207ENST00000474270 NLRP13Q86W25 1043 aa18.19■□□□□ 0.5
ABCD4-207ENST00000474270 LTN1O94822 1766 aa18.19■□□□□ 0.5
ABCD4-207ENST00000474270 EVC2Q86UK5 1308 aa18.19■□□□□ 0.5
ABCD4-207ENST00000474270 APBA3O96018 575 aa18.18■□□□□ 0.5
ABCD4-207ENST00000474270 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
ABCD4-207ENST00000474270 CPDO75976 1380 aa18.17■□□□□ 0.5
ABCD4-207ENST00000474270 GCP02774 474 aa18.17■□□□□ 0.5
ABCD4-207ENST00000474270 DISP2A7MBM2 1401 aa18.16■□□□□ 0.5
ABCD4-207ENST00000474270 RREB1Q92766 1687 aa18.16■□□□□ 0.5
ABCD4-207ENST00000474270 COL5A2P05997 1499 aaPredicted RBP18.16■□□□□ 0.5
ABCD4-207ENST00000474270 EIF4G2P78344 907 aaKnown RBP eCLIP18.16■□□□□ 0.5
ABCD4-207ENST00000474270 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
ABCD4-207ENST00000474270 CAMKK2Q96RR4 588 aa18.16■□□□□ 0.5
ABCD4-207ENST00000474270 LRRC37A3O60309 1634 aa18.16■□□□□ 0.5
ABCD4-207ENST00000474270 BRD4O60885 1362 aaPredicted RBP18.16■□□□□ 0.5
ABCD4-207ENST00000474270 NUP188Q5SRE5 1749 aa18.15■□□□□ 0.5
ABCD4-207ENST00000474270 NLRP6P59044 892 aa18.15■□□□□ 0.5
ABCD4-207ENST00000474270 TCP11L2Q8N4U5 519 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms