RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 THSD7AQ9UPZ6 1657 aa28.37■■■□□ 2.13
SORT1-203ENST00000471996 ACIN1Q9UKV3 1341 aaKnown RBP28.37■■■□□ 2.13
SORT1-203ENST00000471996 TNS1Q9HBL0 1735 aaKnown RBP28.36■■■□□ 2.13
SORT1-203ENST00000471996 FAM196AQ6ZSG2 479 aa28.36■■■□□ 2.13
SORT1-203ENST00000471996 PRDM11Q9NQV5 511 aa28.35■■■□□ 2.13
SORT1-203ENST00000471996 ALS2Q96Q42 1657 aa28.35■■■□□ 2.13
SORT1-203ENST00000471996 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
SORT1-203ENST00000471996 TRIM37O94972 964 aa28.34■■■□□ 2.13
SORT1-203ENST00000471996 SPATA31A1Q5TZJ5 1347 aa28.33■■■□□ 2.13
SORT1-203ENST00000471996 ADGRB2O60241 1585 aa28.33■■■□□ 2.12
SORT1-203ENST00000471996 PRR36Q9H6K5 1346 aa28.32■■■□□ 2.12
SORT1-203ENST00000471996 PARD3Q8TEW0 1356 aa28.32■■■□□ 2.12
SORT1-203ENST00000471996 APBA3O96018 575 aa28.31■■■□□ 2.12
SORT1-203ENST00000471996 YY1P25490 414 aa28.31■■■□□ 2.12
SORT1-203ENST00000471996 HIRIP3Q9BW71 556 aaPredicted RBP28.31■■■□□ 2.12
SORT1-203ENST00000471996 EIF3AQ14152 1382 aaKnown RBP28.3■■■□□ 2.12
SORT1-203ENST00000471996 PAK3O75914 559 aaPredicted RBP28.28■■■□□ 2.12
SORT1-203ENST00000471996 NGDNQ8NEJ9 315 aaKnown RBP28.28■■■□□ 2.12
SORT1-203ENST00000471996 KIAA0232Q92628 1395 aa28.25■■■□□ 2.11
SORT1-203ENST00000471996 MINK1Q8N4C8 1332 aaPredicted RBP28.25■■■□□ 2.11
SORT1-203ENST00000471996 TULP4Q9NRJ4 1543 aa28.25■■■□□ 2.11
SORT1-203ENST00000471996 WASLO00401 505 aaPredicted RBP28.25■■■□□ 2.11
SORT1-203ENST00000471996 TRAK1Q9UPV9 953 aa28.25■■■□□ 2.11
SORT1-203ENST00000471996 CRYBG1Q9Y4K1 1723 aa28.25■■■□□ 2.11
SORT1-203ENST00000471996 CHRNA2Q15822 529 aa28.24■■■□□ 2.11
SORT1-203ENST00000471996 STRN4Q9NRL3 753 aa28.24■■■□□ 2.11
SORT1-203ENST00000471996 NBPF8Q3BBV2 869 aa28.22■■■□□ 2.11
SORT1-203ENST00000471996 NBPF14Q5TI25 921 aa28.22■■■□□ 2.11
SORT1-203ENST00000471996 ADGRB1O14514 1584 aa28.21■■■□□ 2.11
SORT1-203ENST00000471996 PDE3BQ13370 1112 aa28.2■■■□□ 2.1
SORT1-203ENST00000471996 BARGINQ6ZT62 677 aa28.2■■■□□ 2.1
SORT1-203ENST00000471996 USP35Q9P2H5 1018 aa28.19■■■□□ 2.1
SORT1-203ENST00000471996 ZC3H6P61129 1189 aaKnown RBP28.17■■■□□ 2.1
SORT1-203ENST00000471996 SPON1Q9HCB6 807 aa28.16■■■□□ 2.1
SORT1-203ENST00000471996 RREB1Q92766 1687 aa28.16■■■□□ 2.1
SORT1-203ENST00000471996 EVA1CP58658 441 aa28.15■■■□□ 2.1
SORT1-203ENST00000471996 PPP1R1BQ9UD71 204 aaPredicted RBP28.15■■■□□ 2.1
SORT1-203ENST00000471996 SSH2Q76I76 1423 aa28.14■■■□□ 2.1
SORT1-203ENST00000471996 KCNQ2O43526 872 aa28.13■■■□□ 2.09
SORT1-203ENST00000471996 NUP188Q5SRE5 1749 aa28.12■■■□□ 2.09
SORT1-203ENST00000471996 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
SORT1-203ENST00000471996 NUDT16Q96DE0 195 aaKnown RBP28.12■■■□□ 2.09
SORT1-203ENST00000471996 ATP7BP35670 1465 aa28.11■■■□□ 2.09
SORT1-203ENST00000471996 NUTM2GQ5VZR2 741 aa28.11■■■□□ 2.09
SORT1-203ENST00000471996 TCP11L2Q8N4U5 519 aa28.11■■■□□ 2.09
SORT1-203ENST00000471996 NINLQ9Y2I6 1382 aa28.11■■■□□ 2.09
SORT1-203ENST00000471996 LARP1Q6PKG0 1096 aaKnown RBP28.1■■■□□ 2.09
SORT1-203ENST00000471996 PHRF1Q9P1Y6 1649 aaKnown RBP28.1■■■□□ 2.09
SORT1-203ENST00000471996 THRAP3Q9Y2W1 955 aaKnown RBP28.06■■■□□ 2.08
SORT1-203ENST00000471996 KDM2AQ9Y2K7 1162 aa28.05■■■□□ 2.08
SORT1-203ENST00000471996 CAMTA1Q9Y6Y1 1673 aa28.05■■■□□ 2.08
SORT1-203ENST00000471996 POLR3AO14802 1390 aaPredicted RBP28.03■■■□□ 2.08
SORT1-203ENST00000471996 CPDO75976 1380 aa28.03■■■□□ 2.08
SORT1-203ENST00000471996 C11orf95C9JLR9 678 aaPredicted RBP28.03■■■□□ 2.08
SORT1-203ENST00000471996 ACEP12821 1306 aa28.02■■■□□ 2.08
SORT1-203ENST00000471996 ITSN1Q15811 1721 aa28.01■■■□□ 2.07
SORT1-203ENST00000471996 DCAF11Q8TEB1 546 aa28.01■■■□□ 2.07
SORT1-203ENST00000471996 CDK19Q9BWU1 502 aa28■■■□□ 2.07
SORT1-203ENST00000471996 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
SORT1-203ENST00000471996 NRKQ7Z2Y5 1582 aa27.99■■■□□ 2.07
SORT1-203ENST00000471996 USP19O94966 1318 aa27.98■■■□□ 2.07
SORT1-203ENST00000471996 LMO7Q8WWI1 1683 aa27.98■■■□□ 2.07
SORT1-203ENST00000471996 STAC3Q96MF2 364 aa27.98■■■□□ 2.07
SORT1-203ENST00000471996 CCDC61Q9Y6R9 512 aa27.98■■■□□ 2.07
SORT1-203ENST00000471996 PLEKHG3A1L390 1219 aa27.97■■■□□ 2.07
SORT1-203ENST00000471996 PLSCR1O15162 318 aa27.97■■■□□ 2.07
SORT1-203ENST00000471996 OVOS2A0A0G2JMS6 1433 aa27.94■■■□□ 2.06
SORT1-203ENST00000471996 OVOS2A0A0J9YW53 1432 aa27.94■■■□□ 2.06
SORT1-203ENST00000471996 OVOS2Q6IE36 1432 aa27.94■■■□□ 2.06
SORT1-203ENST00000471996 GCP02774 474 aa27.94■■■□□ 2.06
SORT1-203ENST00000471996 ANO8Q9HCE9 1232 aaPredicted RBP27.94■■■□□ 2.06
SORT1-203ENST00000471996 PARP4Q9UKK3 1724 aaKnown RBP27.93■■■□□ 2.06
SORT1-203ENST00000471996 COL5A2P05997 1499 aaPredicted RBP27.93■■■□□ 2.06
SORT1-203ENST00000471996 NLRP13Q86W25 1043 aa27.92■■■□□ 2.06
SORT1-203ENST00000471996 ARHGEF28Q8N1W1 1705 aaKnown RBP27.92■■■□□ 2.06
SORT1-203ENST00000471996 CRB1P82279 1406 aa27.91■■■□□ 2.06
SORT1-203ENST00000471996 TOPAZ1Q8N9V7 1692 aa27.89■■■□□ 2.06
SORT1-203ENST00000471996 BCL11BQ9C0K0 894 aaPredicted RBP27.89■■■□□ 2.06
SORT1-203ENST00000471996 PDGFDQ9GZP0 370 aaPredicted RBP27.89■■■□□ 2.06
SORT1-203ENST00000471996 PEAK1Q9H792 1746 aa27.89■■■□□ 2.05
SORT1-203ENST00000471996 ZNF784Q8NCA9 323 aaPredicted RBP27.88■■■□□ 2.05
SORT1-203ENST00000471996 RGPD3A6NKT7 1758 aaPredicted RBP27.88■■■□□ 2.05
SORT1-203ENST00000471996 RGPD4Q7Z3J3 1758 aa27.88■■■□□ 2.05
SORT1-203ENST00000471996 DDB1Q16531 1140 aa27.87■■■□□ 2.05
SORT1-203ENST00000471996 CASZ1Q86V15 1759 aa27.86■■■□□ 2.05
SORT1-203ENST00000471996 ZBTB7AO95365 584 aa27.86■■■□□ 2.05
SORT1-203ENST00000471996 PTF1AQ7RTS3 328 aa27.86■■■□□ 2.05
SORT1-203ENST00000471996 PROM2Q8N271 834 aa27.86■■■□□ 2.05
SORT1-203ENST00000471996 PTGER2P43116 358 aa27.85■■■□□ 2.05
SORT1-203ENST00000471996 UTRNP46939 3433 aa27.84■■■□□ 2.05
SORT1-203ENST00000471996 AATKQ6ZMQ8 1374 aa27.83■■■□□ 2.05
SORT1-203ENST00000471996 RAB3GAP2Q9H2M9 1393 aa27.83■■■□□ 2.05
SORT1-203ENST00000471996 ZBTB7CA1YPR0 619 aa27.81■■■□□ 2.04
SORT1-203ENST00000471996 TOM1L2Q6ZVM7 507 aa27.8■■■□□ 2.04
SORT1-203ENST00000471996 ATF5Q9Y2D1 282 aaPredicted RBP27.8■■■□□ 2.04
SORT1-203ENST00000471996 BRD4O60885 1362 aaPredicted RBP27.8■■■□□ 2.04
SORT1-203ENST00000471996 LRRC37A3O60309 1634 aa27.8■■■□□ 2.04
SORT1-203ENST00000471996 BCL9O00512 1426 aa27.79■■■□□ 2.04
SORT1-203ENST00000471996 MARCH10Q8NA82 808 aaPredicted RBP27.79■■■□□ 2.04
SORT1-203ENST00000471996 PPIP5K1Q6PFW1 1433 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms