RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
MRPL40-203ENST00000471259 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
MRPL40-203ENST00000471259 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
MRPL40-203ENST00000471259 EN1Q05925 392 aaPredicted RBP16.67■□□□□ 0.26
MRPL40-203ENST00000471259 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
MRPL40-203ENST00000471259 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
MRPL40-203ENST00000471259 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
MRPL40-203ENST00000471259 FAM196AQ6ZSG2 479 aa16.66■□□□□ 0.26
MRPL40-203ENST00000471259 NRAPQ86VF7 1730 aa16.66■□□□□ 0.26
MRPL40-203ENST00000471259 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.26
MRPL40-203ENST00000471259 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
MRPL40-203ENST00000471259 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
MRPL40-203ENST00000471259 ALS2Q96Q42 1657 aa16.63■□□□□ 0.25
MRPL40-203ENST00000471259 TRPM3Q9HCF6 1732 aaPredicted RBP16.63■□□□□ 0.25
MRPL40-203ENST00000471259 WASLO00401 505 aaPredicted RBP16.63■□□□□ 0.25
MRPL40-203ENST00000471259 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
MRPL40-203ENST00000471259 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
MRPL40-203ENST00000471259 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
MRPL40-203ENST00000471259 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
MRPL40-203ENST00000471259 MINK1Q8N4C8 1332 aaPredicted RBP16.62■□□□□ 0.25
MRPL40-203ENST00000471259 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
MRPL40-203ENST00000471259 NBPF14Q5TI25 921 aa16.61■□□□□ 0.25
MRPL40-203ENST00000471259 EVA1CP58658 441 aa16.6■□□□□ 0.25
MRPL40-203ENST00000471259 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
MRPL40-203ENST00000471259 SPATA31A1Q5TZJ5 1347 aa16.6■□□□□ 0.25
MRPL40-203ENST00000471259 APBA3O96018 575 aa16.59■□□□□ 0.25
MRPL40-203ENST00000471259 ATP7BP35670 1465 aa16.59■□□□□ 0.25
MRPL40-203ENST00000471259 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
MRPL40-203ENST00000471259 EZH2Q15910 746 aaKnown RBP16.58■□□□□ 0.24
MRPL40-203ENST00000471259 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
MRPL40-203ENST00000471259 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
MRPL40-203ENST00000471259 ADGRB1O14514 1584 aa16.57■□□□□ 0.24
MRPL40-203ENST00000471259 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
MRPL40-203ENST00000471259 TRIM37O94972 964 aa16.57■□□□□ 0.24
MRPL40-203ENST00000471259 FAM182BQ5T319 152 aa16.57■□□□□ 0.24
MRPL40-203ENST00000471259 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
MRPL40-203ENST00000471259 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
MRPL40-203ENST00000471259 BARGINQ6ZT62 677 aa16.56■□□□□ 0.24
MRPL40-203ENST00000471259 TNS1Q9HBL0 1735 aaKnown RBP16.56■□□□□ 0.24
MRPL40-203ENST00000471259 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
MRPL40-203ENST00000471259 NUDT16Q96DE0 195 aaKnown RBP16.55■□□□□ 0.24
MRPL40-203ENST00000471259 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
MRPL40-203ENST00000471259 THRAP3Q9Y2W1 955 aaKnown RBP16.55■□□□□ 0.24
MRPL40-203ENST00000471259 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
MRPL40-203ENST00000471259 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
MRPL40-203ENST00000471259 PPP1R1BQ9UD71 204 aaPredicted RBP16.53■□□□□ 0.24
MRPL40-203ENST00000471259 CRYBG1Q9Y4K1 1723 aa16.53■□□□□ 0.24
MRPL40-203ENST00000471259 CHRNA2Q15822 529 aa16.52■□□□□ 0.24
MRPL40-203ENST00000471259 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.24
MRPL40-203ENST00000471259 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.24
MRPL40-203ENST00000471259 YY1P25490 414 aa16.5■□□□□ 0.23
MRPL40-203ENST00000471259 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
MRPL40-203ENST00000471259 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
MRPL40-203ENST00000471259 SPON1Q9HCB6 807 aa16.5■□□□□ 0.23
MRPL40-203ENST00000471259 SSH2Q76I76 1423 aa16.5■□□□□ 0.23
MRPL40-203ENST00000471259 PHRF1Q9P1Y6 1649 aaKnown RBP16.49■□□□□ 0.23
MRPL40-203ENST00000471259 CDK19Q9BWU1 502 aa16.49■□□□□ 0.23
MRPL40-203ENST00000471259 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
MRPL40-203ENST00000471259 CPDO75976 1380 aa16.49■□□□□ 0.23
MRPL40-203ENST00000471259 ACEP12821 1306 aa16.48■□□□□ 0.23
MRPL40-203ENST00000471259 PLEKHG3A1L390 1219 aa16.48■□□□□ 0.23
MRPL40-203ENST00000471259 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
MRPL40-203ENST00000471259 RAB3GAP2Q9H2M9 1393 aa16.48■□□□□ 0.23
MRPL40-203ENST00000471259 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
MRPL40-203ENST00000471259 ARHGEF28Q8N1W1 1705 aaKnown RBP16.45■□□□□ 0.22
MRPL40-203ENST00000471259 KCNQ2O43526 872 aa16.45■□□□□ 0.22
MRPL40-203ENST00000471259 LARP1Q6PKG0 1096 aaKnown RBP16.45■□□□□ 0.22
MRPL40-203ENST00000471259 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
MRPL40-203ENST00000471259 RREB1Q92766 1687 aa16.45■□□□□ 0.22
MRPL40-203ENST00000471259 GCP02774 474 aa16.43■□□□□ 0.22
MRPL40-203ENST00000471259 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
MRPL40-203ENST00000471259 OVOS2A0A0J9YW53 1432 aa16.43■□□□□ 0.22
MRPL40-203ENST00000471259 OVOS2Q6IE36 1432 aa16.43■□□□□ 0.22
MRPL40-203ENST00000471259 USP19O94966 1318 aa16.43■□□□□ 0.22
MRPL40-203ENST00000471259 PLSCR1O15162 318 aa16.42■□□□□ 0.22
MRPL40-203ENST00000471259 SRPK2P78362 688 aaKnown RBP16.42■□□□□ 0.22
MRPL40-203ENST00000471259 NUP188Q5SRE5 1749 aa16.42■□□□□ 0.22
MRPL40-203ENST00000471259 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
MRPL40-203ENST00000471259 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
MRPL40-203ENST00000471259 CRB1P82279 1406 aa16.41■□□□□ 0.22
MRPL40-203ENST00000471259 NRKQ7Z2Y5 1582 aa16.41■□□□□ 0.22
MRPL40-203ENST00000471259 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
MRPL40-203ENST00000471259 PARP4Q9UKK3 1724 aaKnown RBP16.4■□□□□ 0.22
MRPL40-203ENST00000471259 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
MRPL40-203ENST00000471259 DDB1Q16531 1140 aa16.4■□□□□ 0.22
MRPL40-203ENST00000471259 LMO7Q8WWI1 1683 aa16.39■□□□□ 0.21
MRPL40-203ENST00000471259 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.21
MRPL40-203ENST00000471259 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
MRPL40-203ENST00000471259 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
MRPL40-203ENST00000471259 COL5A2P05997 1499 aaPredicted RBP16.38■□□□□ 0.21
MRPL40-203ENST00000471259 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
MRPL40-203ENST00000471259 NLRP6P59044 892 aa16.37■□□□□ 0.21
MRPL40-203ENST00000471259 TOM1L2Q6ZVM7 507 aa16.37■□□□□ 0.21
MRPL40-203ENST00000471259 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
MRPL40-203ENST00000471259 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
MRPL40-203ENST00000471259 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
MRPL40-203ENST00000471259 CENPJQ9HC77 1338 aaPredicted RBP16.36■□□□□ 0.21
MRPL40-203ENST00000471259 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
MRPL40-203ENST00000471259 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
MRPL40-203ENST00000471259 BCL9O00512 1426 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms