RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 PAK3O75914 559 aaPredicted RBP25.12■■□□□ 1.61
LMNA-212ENST00000470835 SEPT12Q8IYM1 358 aa25.12■■□□□ 1.61
LMNA-212ENST00000470835 NUDT16Q96DE0 195 aaKnown RBP25.12■■□□□ 1.61
LMNA-212ENST00000470835 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
LMNA-212ENST00000470835 QRICH2Q9H0J4 1663 aa25.1■■□□□ 1.61
LMNA-212ENST00000470835 CDK19Q9BWU1 502 aa25.09■■□□□ 1.61
LMNA-212ENST00000470835 BTG4Q9NY30 223 aa25.09■■□□□ 1.61
LMNA-212ENST00000470835 ONECUT3O60422 494 aaPredicted RBP25.07■■□□□ 1.6
LMNA-212ENST00000470835 NBPF1Q3BBV0 1214 aa25.06■■□□□ 1.6
LMNA-212ENST00000470835 POLR3AO14802 1390 aaPredicted RBP25.05■■□□□ 1.6
LMNA-212ENST00000470835 A0A0G2JS52 829 aa25.05■■□□□ 1.6
LMNA-212ENST00000470835 MYT1Q01538 1121 aa25.05■■□□□ 1.6
LMNA-212ENST00000470835 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
LMNA-212ENST00000470835 PRDM11Q9NQV5 511 aa25.04■■□□□ 1.6
LMNA-212ENST00000470835 ZRANB1Q9UGI0 708 aa25.04■■□□□ 1.6
LMNA-212ENST00000470835 ACEP12821 1306 aa25.03■■□□□ 1.6
LMNA-212ENST00000470835 THSD7AQ9UPZ6 1657 aa25.03■■□□□ 1.6
LMNA-212ENST00000470835 NRKQ7Z2Y5 1582 aa25.02■■□□□ 1.6
LMNA-212ENST00000470835 SRCAPQ6ZRS2 3230 aa25.02■■□□□ 1.6
LMNA-212ENST00000470835 FAM98CQ17RN3 349 aaKnown RBP25.02■■□□□ 1.6
LMNA-212ENST00000470835 CCDC61Q9Y6R9 512 aa25.02■■□□□ 1.6
LMNA-212ENST00000470835 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
LMNA-212ENST00000470835 KIAA0232Q92628 1395 aa25.01■■□□□ 1.59
LMNA-212ENST00000470835 CENPJQ9HC77 1338 aaPredicted RBP25■■□□□ 1.59
LMNA-212ENST00000470835 RGPD1P0DJD0 1748 aa24.99■■□□□ 1.59
LMNA-212ENST00000470835 SF3B2Q13435 895 aaKnown RBP24.99■■□□□ 1.59
LMNA-212ENST00000470835 SPATA31A5Q5VU36 1347 aa24.99■■□□□ 1.59
LMNA-212ENST00000470835 DEFB132Q7Z7B7 95 aa24.99■■□□□ 1.59
LMNA-212ENST00000470835 SPATA31A7Q8IWB4 1347 aa24.99■■□□□ 1.59
LMNA-212ENST00000470835 PPIP5K1Q6PFW1 1433 aa24.98■■□□□ 1.59
LMNA-212ENST00000470835 PLEKHG3A1L390 1219 aa24.98■■□□□ 1.59
LMNA-212ENST00000470835 NBPF8Q3BBV2 869 aa24.98■■□□□ 1.59
LMNA-212ENST00000470835 NUTM2GQ5VZR2 741 aa24.98■■□□□ 1.59
LMNA-212ENST00000470835 SRPK2P78362 688 aaKnown RBP24.97■■□□□ 1.59
LMNA-212ENST00000470835 CHRNA2Q15822 529 aa24.96■■□□□ 1.59
LMNA-212ENST00000470835 ZC3H6P61129 1189 aaKnown RBP24.94■■□□□ 1.58
LMNA-212ENST00000470835 L3MBTL2Q969R5 705 aa24.94■■□□□ 1.58
LMNA-212ENST00000470835 LMO7Q8WWI1 1683 aa24.94■■□□□ 1.58
LMNA-212ENST00000470835 TNS1Q9HBL0 1735 aaKnown RBP24.93■■□□□ 1.58
LMNA-212ENST00000470835 ABTB2Q8N961 1025 aa24.92■■□□□ 1.58
LMNA-212ENST00000470835 CABP2Q9NPB3 220 aa24.92■■□□□ 1.58
LMNA-212ENST00000470835 STRN4Q9NRL3 753 aa24.91■■□□□ 1.58
LMNA-212ENST00000470835 SPATA31A1Q5TZJ5 1347 aa24.9■■□□□ 1.58
LMNA-212ENST00000470835 USP19O94966 1318 aa24.89■■□□□ 1.58
LMNA-212ENST00000470835 CAMTA1Q9Y6Y1 1673 aa24.89■■□□□ 1.58
LMNA-212ENST00000470835 SIN3AQ96ST3 1273 aa24.89■■□□□ 1.58
LMNA-212ENST00000470835 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
LMNA-212ENST00000470835 FAM182BQ5T319 152 aa24.88■■□□□ 1.57
LMNA-212ENST00000470835 CPDO75976 1380 aa24.88■■□□□ 1.57
LMNA-212ENST00000470835 BAG6P46379 1132 aa24.87■■□□□ 1.57
LMNA-212ENST00000470835 USP6P35125 1406 aa24.86■■□□□ 1.57
LMNA-212ENST00000470835 AKAP12Q02952 1782 aa24.86■■□□□ 1.57
LMNA-212ENST00000470835 PIK3C2AO00443 1686 aa24.86■■□□□ 1.57
LMNA-212ENST00000470835 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
LMNA-212ENST00000470835 ROCK2O75116 1388 aaKnown RBP24.85■■□□□ 1.57
LMNA-212ENST00000470835 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
LMNA-212ENST00000470835 NLRP13Q86W25 1043 aa24.85■■□□□ 1.57
LMNA-212ENST00000470835 EVA1CP58658 441 aa24.83■■□□□ 1.57
LMNA-212ENST00000470835 CABP1Q9NZU7 370 aa24.83■■□□□ 1.57
LMNA-212ENST00000470835 USP35Q9P2H5 1018 aa24.83■■□□□ 1.57
LMNA-212ENST00000470835 EVC2Q86UK5 1308 aa24.83■■□□□ 1.56
LMNA-212ENST00000470835 SLIT3O75094 1523 aa24.82■■□□□ 1.56
LMNA-212ENST00000470835 GCP02774 474 aa24.81■■□□□ 1.56
LMNA-212ENST00000470835 LRP5O75197 1615 aa24.81■■□□□ 1.56
LMNA-212ENST00000470835 PARP4Q9UKK3 1724 aaKnown RBP24.81■■□□□ 1.56
LMNA-212ENST00000470835 DISP2A7MBM2 1401 aa24.8■■□□□ 1.56
LMNA-212ENST00000470835 COL5A2P05997 1499 aaPredicted RBP24.8■■□□□ 1.56
LMNA-212ENST00000470835 LARP1Q6PKG0 1096 aaKnown RBP24.79■■□□□ 1.56
LMNA-212ENST00000470835 BARGINQ6ZT62 677 aa24.78■■□□□ 1.56
LMNA-212ENST00000470835 EN1Q05925 392 aaPredicted RBP24.77■■□□□ 1.56
LMNA-212ENST00000470835 COL18A1P39060 1754 aa24.77■■□□□ 1.56
LMNA-212ENST00000470835 WNK3Q9BYP7 1800 aa24.77■■□□□ 1.56
LMNA-212ENST00000470835 NLRP6P59044 892 aa24.76■■□□□ 1.55
LMNA-212ENST00000470835 MON2Q7Z3U7 1717 aa24.75■■□□□ 1.55
LMNA-212ENST00000470835 FAM196AQ6ZSG2 479 aa24.75■■□□□ 1.55
LMNA-212ENST00000470835 TCP11L2Q8N4U5 519 aa24.75■■□□□ 1.55
LMNA-212ENST00000470835 RGPD5Q99666 1765 aa24.75■■□□□ 1.55
LMNA-212ENST00000470835 ZBTB7CA1YPR0 619 aa24.74■■□□□ 1.55
LMNA-212ENST00000470835 PSDA5PKW4 1024 aaPredicted RBP24.74■■□□□ 1.55
LMNA-212ENST00000470835 CRB1P82279 1406 aa24.73■■□□□ 1.55
LMNA-212ENST00000470835 RREB1Q92766 1687 aa24.72■■□□□ 1.55
LMNA-212ENST00000470835 AATKQ6ZMQ8 1374 aa24.72■■□□□ 1.55
LMNA-212ENST00000470835 TRIM37O94972 964 aa24.72■■□□□ 1.55
LMNA-212ENST00000470835 PDE3BQ13370 1112 aa24.72■■□□□ 1.55
LMNA-212ENST00000470835 LRRC37A3O60309 1634 aa24.72■■□□□ 1.55
LMNA-212ENST00000470835 THRAP3Q9Y2W1 955 aaKnown RBP24.71■■□□□ 1.55
LMNA-212ENST00000470835 CPSF1Q10570 1443 aaKnown RBP24.69■■□□□ 1.54
LMNA-212ENST00000470835 NUP188Q5SRE5 1749 aa24.69■■□□□ 1.54
LMNA-212ENST00000470835 SBNO2Q9Y2G9 1366 aa24.68■■□□□ 1.54
LMNA-212ENST00000470835 TTC21BQ7Z4L5 1316 aa24.68■■□□□ 1.54
LMNA-212ENST00000470835 EZH2Q15910 746 aaKnown RBP24.68■■□□□ 1.54
LMNA-212ENST00000470835 ZNF692Q9BU19 519 aaPredicted RBP24.68■■□□□ 1.54
LMNA-212ENST00000470835 SBF2Q86WG5 1849 aa24.68■■□□□ 1.54
LMNA-212ENST00000470835 PEAK1Q9H792 1746 aa24.67■■□□□ 1.54
LMNA-212ENST00000470835 TTC21AQ8NDW8 1320 aa24.66■■□□□ 1.54
LMNA-212ENST00000470835 KTN1Q86UP2 1357 aaKnown RBP24.66■■□□□ 1.54
LMNA-212ENST00000470835 PARD3Q8TEW0 1356 aa24.66■■□□□ 1.54
LMNA-212ENST00000470835 NFAT5O94916 1531 aa24.66■■□□□ 1.54
LMNA-212ENST00000470835 USP54Q70EL1 1684 aa24.66■■□□□ 1.54
LMNA-212ENST00000470835 APBA3O96018 575 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms