RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 NRAPQ86VF7 1730 aa12.25□□□□□ -0.45
TGFBR3-206ENST00000470600 COL18A1P39060 1754 aa12.25□□□□□ -0.45
TGFBR3-206ENST00000470600 CABP1Q9NZU7 370 aa12.25□□□□□ -0.45
TGFBR3-206ENST00000470600 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
TGFBR3-206ENST00000470600 OVOS2A0A0J9YW53 1432 aa12.24□□□□□ -0.45
TGFBR3-206ENST00000470600 USP19O94966 1318 aa12.24□□□□□ -0.45
TGFBR3-206ENST00000470600 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
TGFBR3-206ENST00000470600 OVOS2Q6IE36 1432 aa12.24□□□□□ -0.45
TGFBR3-206ENST00000470600 SLC12A5Q9H2X9 1139 aa12.24□□□□□ -0.45
TGFBR3-206ENST00000470600 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
TGFBR3-206ENST00000470600 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
TGFBR3-206ENST00000470600 ANKRD26Q9UPS8 1709 aa12.23□□□□□ -0.45
TGFBR3-206ENST00000470600 PLCH1Q4KWH8 1693 aa12.23□□□□□ -0.45
TGFBR3-206ENST00000470600 ANKRD36BQ8N2N9 1353 aa12.23□□□□□ -0.45
TGFBR3-206ENST00000470600 SRPK2P78362 688 aaKnown RBP12.23□□□□□ -0.45
TGFBR3-206ENST00000470600 KRT28Q7Z3Y7 464 aa12.23□□□□□ -0.45
TGFBR3-206ENST00000470600 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.23□□□□□ -0.45
TGFBR3-206ENST00000470600 BRD4O60885 1362 aaPredicted RBP12.22□□□□□ -0.45
TGFBR3-206ENST00000470600 KIF7Q2M1P5 1343 aa12.22□□□□□ -0.45
TGFBR3-206ENST00000470600 EDC4Q6P2E9 1401 aaKnown RBP12.21□□□□□ -0.45
TGFBR3-206ENST00000470600 USP31Q70CQ4 1352 aa12.21□□□□□ -0.45
TGFBR3-206ENST00000470600 WASHC2AQ641Q2 1341 aa12.21□□□□□ -0.45
TGFBR3-206ENST00000470600 CARD14Q9BXL6 1004 aa12.21□□□□□ -0.45
TGFBR3-206ENST00000470600 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
TGFBR3-206ENST00000470600 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
TGFBR3-206ENST00000470600 TMF1P82094 1093 aa12.2□□□□□ -0.46
TGFBR3-206ENST00000470600 SLIT2O94813 1529 aa12.2□□□□□ -0.46
TGFBR3-206ENST00000470600 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
TGFBR3-206ENST00000470600 SPATA31A6Q5VVP1 1343 aa12.19□□□□□ -0.46
TGFBR3-206ENST00000470600 TTC21BQ7Z4L5 1316 aa12.19□□□□□ -0.46
TGFBR3-206ENST00000470600 LRRC59Q96AG4 307 aaKnown RBP12.19□□□□□ -0.46
TGFBR3-206ENST00000470600 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
TGFBR3-206ENST00000470600 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
TGFBR3-206ENST00000470600 BCL9LQ86UU0 1499 aa12.17□□□□□ -0.46
TGFBR3-206ENST00000470600 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
TGFBR3-206ENST00000470600 COL14A1Q05707 1796 aaKnown RBP12.17□□□□□ -0.46
TGFBR3-206ENST00000470600 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
TGFBR3-206ENST00000470600 LTN1O94822 1766 aa12.16□□□□□ -0.46
TGFBR3-206ENST00000470600 RGPD5Q99666 1765 aa12.16□□□□□ -0.46
TGFBR3-206ENST00000470600 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
TGFBR3-206ENST00000470600 NSD3Q9BZ95 1437 aa12.15□□□□□ -0.46
TGFBR3-206ENST00000470600 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
TGFBR3-206ENST00000470600 ABCC6O95255 1503 aa12.15□□□□□ -0.46
TGFBR3-206ENST00000470600 CPDO75976 1380 aa12.15□□□□□ -0.46
TGFBR3-206ENST00000470600 TTC21AQ8NDW8 1320 aa12.14□□□□□ -0.47
TGFBR3-206ENST00000470600 EP400Q96L91 3159 aa12.14□□□□□ -0.47
TGFBR3-206ENST00000470600 CAMTA1Q9Y6Y1 1673 aa12.14□□□□□ -0.47
TGFBR3-206ENST00000470600 PER1O15534 1290 aaPredicted RBP12.14□□□□□ -0.47
TGFBR3-206ENST00000470600 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
TGFBR3-206ENST00000470600 PSME1Q06323 249 aa12.14□□□□□ -0.47
TGFBR3-206ENST00000470600 GLI3P10071 1580 aa12.13□□□□□ -0.47
TGFBR3-206ENST00000470600 NME9Q86XW9 330 aa12.13□□□□□ -0.47
TGFBR3-206ENST00000470600 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
TGFBR3-206ENST00000470600 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
TGFBR3-206ENST00000470600 ATRNO75882 1429 aa12.11□□□□□ -0.47
TGFBR3-206ENST00000470600 FYB1O15117 783 aa12.11□□□□□ -0.47
TGFBR3-206ENST00000470600 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-206ENST00000470600 KIAA0232Q92628 1395 aa12.1□□□□□ -0.47
TGFBR3-206ENST00000470600 CDCA8Q53HL2 280 aa12.1□□□□□ -0.47
TGFBR3-206ENST00000470600 NUTM2GQ5VZR2 741 aa12.1□□□□□ -0.47
TGFBR3-206ENST00000470600 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
TGFBR3-206ENST00000470600 SMG6Q86US8 1419 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-206ENST00000470600 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-206ENST00000470600 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-206ENST00000470600 THSD7AQ9UPZ6 1657 aa12.09□□□□□ -0.47
TGFBR3-206ENST00000470600 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
TGFBR3-206ENST00000470600 FAM83GA6ND36 823 aa12.08□□□□□ -0.48
TGFBR3-206ENST00000470600 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
TGFBR3-206ENST00000470600 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
TGFBR3-206ENST00000470600 RGPD2P0DJD1 1756 aa12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 GCP02774 474 aa12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 ZEB1P37275 1124 aaPredicted RBP12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 PANK3Q9H999 370 aa12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
TGFBR3-206ENST00000470600 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
TGFBR3-206ENST00000470600 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
TGFBR3-206ENST00000470600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.06□□□□□ -0.48
TGFBR3-206ENST00000470600 AFF2P51816 1311 aa12.06□□□□□ -0.48
TGFBR3-206ENST00000470600 RGPD1P0DJD0 1748 aa12.06□□□□□ -0.48
TGFBR3-206ENST00000470600 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
TGFBR3-206ENST00000470600 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
TGFBR3-206ENST00000470600 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
TGFBR3-206ENST00000470600 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
TGFBR3-206ENST00000470600 FBLN1P23142 703 aa12.05□□□□□ -0.48
TGFBR3-206ENST00000470600 NUTM2AQ8IVF1 878 aaPredicted RBP12.05□□□□□ -0.48
TGFBR3-206ENST00000470600 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
TGFBR3-206ENST00000470600 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 ADAMTS2O95450 1211 aa12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 NLRP6P59044 892 aa12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 NSD2O96028 1365 aa12.04□□□□□ -0.48
TGFBR3-206ENST00000470600 RGS12O14924 1447 aa12.03□□□□□ -0.48
TGFBR3-206ENST00000470600 CDK12Q9NYV4 1490 aaPredicted RBP12.02□□□□□ -0.48
TGFBR3-206ENST00000470600 C8orf37Q96NL8 207 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms