RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 MCCD1P59942 119 aaPredicted RBP9.8□□□□□ -0.84
RBM39-227ENST00000470563 CDAN1Q8IWY9 1227 aa9.8□□□□□ -0.84
RBM39-227ENST00000470563 WNT2BQ93097 391 aa9.8□□□□□ -0.84
RBM39-227ENST00000470563 UCN2Q96RP3 112 aa9.8□□□□□ -0.84
RBM39-227ENST00000470563 ARMC2Q8NEN0 867 aa9.79□□□□□ -0.84
RBM39-227ENST00000470563 ZBBXA8MT70 800 aa9.78□□□□□ -0.84
RBM39-227ENST00000470563 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
RBM39-227ENST00000470563 BCAMP50895 628 aa9.78□□□□□ -0.84
RBM39-227ENST00000470563 PCDH10Q9P2E7 1040 aa9.78□□□□□ -0.84
RBM39-227ENST00000470563 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
RBM39-227ENST00000470563 SEMA3FQ13275 785 aa9.77□□□□□ -0.85
RBM39-227ENST00000470563 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
RBM39-227ENST00000470563 THSD4Q6ZMP0 1018 aa9.76□□□□□ -0.85
RBM39-227ENST00000470563 ATG7O95352 703 aa9.75□□□□□ -0.85
RBM39-227ENST00000470563 CCNYL3P0C7X3 344 aa9.75□□□□□ -0.85
RBM39-227ENST00000470563 PDXDC2PQ6P474 469 aa9.75□□□□□ -0.85
RBM39-227ENST00000470563 MAFBQ9Y5Q3 323 aaPredicted RBP9.75□□□□□ -0.85
RBM39-227ENST00000470563 ATP9BO43861 1147 aa9.74□□□□□ -0.85
RBM39-227ENST00000470563 FBXO45P0C2W1 286 aa9.74□□□□□ -0.85
RBM39-227ENST00000470563 ANKRD13DQ6ZTN6 518 aa9.74□□□□□ -0.85
RBM39-227ENST00000470563 FAM160A2Q8N612 972 aaPredicted RBP9.74□□□□□ -0.85
RBM39-227ENST00000470563 MYT1LQ9UL68 1186 aa9.74□□□□□ -0.85
RBM39-227ENST00000470563 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
RBM39-227ENST00000470563 ELOAQ14241 798 aaKnown RBP9.73□□□□□ -0.85
RBM39-227ENST00000470563 SPSB2Q99619 263 aa9.73□□□□□ -0.85
RBM39-227ENST00000470563 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
RBM39-227ENST00000470563 NBPF14Q5TI25 921 aa9.72□□□□□ -0.85
RBM39-227ENST00000470563 PLEKHM2Q8IWE5 1019 aa9.72□□□□□ -0.85
RBM39-227ENST00000470563 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
RBM39-227ENST00000470563 KRTAP3-2Q9BYR7 98 aa9.72□□□□□ -0.85
RBM39-227ENST00000470563 LZTS3O60299 673 aaPredicted RBP9.71□□□□□ -0.86
RBM39-227ENST00000470563 ADH1BP00325 375 aa9.71□□□□□ -0.86
RBM39-227ENST00000470563 TFIP11Q9UBB9 837 aaKnown RBP9.71□□□□□ -0.86
RBM39-227ENST00000470563 BRD1O95696 1058 aa9.7□□□□□ -0.86
RBM39-227ENST00000470563 NUDT12Q9BQG2 462 aa9.7□□□□□ -0.86
RBM39-227ENST00000470563 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
RBM39-227ENST00000470563 CHIC2Q9UKJ5 165 aa9.7□□□□□ -0.86
RBM39-227ENST00000470563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
RBM39-227ENST00000470563 CSB-PGBD3P0DP91 1061 aa9.69□□□□□ -0.86
RBM39-227ENST00000470563 PTK2Q05397 1052 aa9.69□□□□□ -0.86
RBM39-227ENST00000470563 ZPR1O75312 459 aa9.68□□□□□ -0.86
RBM39-227ENST00000470563 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
RBM39-227ENST00000470563 KCNA1Q09470 495 aa9.68□□□□□ -0.86
RBM39-227ENST00000470563 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
RBM39-227ENST00000470563 KANK4Q5T7N3 995 aaPredicted RBP9.66□□□□□ -0.86
RBM39-227ENST00000470563 OCSTAMPQ9BR26 566 aa9.66□□□□□ -0.86
RBM39-227ENST00000470563 CCDC9Q9Y3X0 531 aaKnown RBP9.66□□□□□ -0.86
RBM39-227ENST00000470563 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.86
RBM39-227ENST00000470563 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
RBM39-227ENST00000470563 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
RBM39-227ENST00000470563 TMEM88BA6NKF7 163 aa9.64□□□□□ -0.87
RBM39-227ENST00000470563 CTHP32929 405 aa9.64□□□□□ -0.87
RBM39-227ENST00000470563 CCDC125Q86Z20 511 aa9.64□□□□□ -0.87
RBM39-227ENST00000470563 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
RBM39-227ENST00000470563 SH3RF1Q7Z6J0 888 aa9.63□□□□□ -0.87
RBM39-227ENST00000470563 MTRQ99707 1265 aa9.63□□□□□ -0.87
RBM39-227ENST00000470563 CEP126Q9P2H0 1117 aa9.63□□□□□ -0.87
RBM39-227ENST00000470563 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
RBM39-227ENST00000470563 RFX1P22670 979 aa9.62□□□□□ -0.87
RBM39-227ENST00000470563 MAP7D1Q3KQU3 841 aa9.62□□□□□ -0.87
RBM39-227ENST00000470563 VRTNQ9H8Y1 702 aa9.62□□□□□ -0.87
RBM39-227ENST00000470563 USP17L3A6NCW0 530 aa9.61□□□□□ -0.87
RBM39-227ENST00000470563 USP17L4A6NCW7 530 aa9.61□□□□□ -0.87
RBM39-227ENST00000470563 COPS2P61201 443 aa9.61□□□□□ -0.87
RBM39-227ENST00000470563 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
RBM39-227ENST00000470563 USP17L1Q7RTZ2 530 aa9.61□□□□□ -0.87
RBM39-227ENST00000470563 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
RBM39-227ENST00000470563 PRDM9Q9NQV7 894 aa9.61□□□□□ -0.87
RBM39-227ENST00000470563 USP17L5A8MUK1 530 aa9.6□□□□□ -0.87
RBM39-227ENST00000470563 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
RBM39-227ENST00000470563 SLC6A16Q9GZN6 736 aa9.6□□□□□ -0.87
RBM39-227ENST00000470563 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
RBM39-227ENST00000470563 FAM174AQ8TBP5 190 aa9.59□□□□□ -0.87
RBM39-227ENST00000470563 KCTD12Q96CX2 325 aaKnown RBP9.59□□□□□ -0.87
RBM39-227ENST00000470563 ARHGAP9Q9BRR9 750 aa9.59□□□□□ -0.87
RBM39-227ENST00000470563 ATP5J2-PTCD1G3V325 749 aa9.58□□□□□ -0.88
RBM39-227ENST00000470563 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
RBM39-227ENST00000470563 TLL1O43897 1013 aa9.57□□□□□ -0.88
RBM39-227ENST00000470563 SKIP12755 728 aa9.57□□□□□ -0.88
RBM39-227ENST00000470563 SLFNL1Q499Z3 407 aa9.57□□□□□ -0.88
RBM39-227ENST00000470563 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
RBM39-227ENST00000470563 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
RBM39-227ENST00000470563 C1QTNF2Q9BXJ5 285 aa9.57□□□□□ -0.88
RBM39-227ENST00000470563 GNEQ9Y223 722 aaKnown RBP9.57□□□□□ -0.88
RBM39-227ENST00000470563 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
RBM39-227ENST00000470563 BPHLQ86WA6 291 aaPredicted RBP9.56□□□□□ -0.88
RBM39-227ENST00000470563 SPNS2Q8IVW8 549 aa9.56□□□□□ -0.88
RBM39-227ENST00000470563 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
RBM39-227ENST00000470563 CDV3Q9UKY7 258 aaKnown RBP9.56□□□□□ -0.88
RBM39-227ENST00000470563 RNF135Q8IUD6 432 aa9.55□□□□□ -0.88
RBM39-227ENST00000470563 PLPP7Q8NBV4 271 aa9.55□□□□□ -0.88
RBM39-227ENST00000470563 ZMIZ1Q9ULJ6 1067 aa9.55□□□□□ -0.88
RBM39-227ENST00000470563 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
RBM39-227ENST00000470563 PCDHB9Q9Y5E1 797 aa9.54□□□□□ -0.88
RBM39-227ENST00000470563 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L10C9JJH3 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L12C9JPN9 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L21D6R901 530 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms