RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
NPHP3-204ENST00000469232 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
NPHP3-204ENST00000469232 SRPK2P78362 688 aaKnown RBP11.25□□□□□ -0.61
NPHP3-204ENST00000469232 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
NPHP3-204ENST00000469232 PANK3Q9H999 370 aa11.25□□□□□ -0.61
NPHP3-204ENST00000469232 POLR3AO14802 1390 aaPredicted RBP11.25□□□□□ -0.61
NPHP3-204ENST00000469232 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
NPHP3-204ENST00000469232 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
NPHP3-204ENST00000469232 CARD14Q9BXL6 1004 aa11.24□□□□□ -0.61
NPHP3-204ENST00000469232 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
NPHP3-204ENST00000469232 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
NPHP3-204ENST00000469232 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
NPHP3-204ENST00000469232 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
NPHP3-204ENST00000469232 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
NPHP3-204ENST00000469232 A0A1W2PP64 1363 aa11.23□□□□□ -0.61
NPHP3-204ENST00000469232 MST1RQ04912 1400 aa11.23□□□□□ -0.61
NPHP3-204ENST00000469232 CABP1Q9NZU7 370 aa11.22□□□□□ -0.61
NPHP3-204ENST00000469232 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
NPHP3-204ENST00000469232 BRD4O60885 1362 aaPredicted RBP11.22□□□□□ -0.61
NPHP3-204ENST00000469232 TERF2IPQ9NYB0 399 aa11.21□□□□□ -0.61
NPHP3-204ENST00000469232 C1orf167Q5SNV9 1468 aa11.21□□□□□ -0.61
NPHP3-204ENST00000469232 NRKQ7Z2Y5 1582 aa11.21□□□□□ -0.61
NPHP3-204ENST00000469232 RGPD8O14715 1765 aaPredicted RBP11.2□□□□□ -0.62
NPHP3-204ENST00000469232 EVX2Q03828 476 aa11.2□□□□□ -0.62
NPHP3-204ENST00000469232 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
NPHP3-204ENST00000469232 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
NPHP3-204ENST00000469232 PARD3Q8TEW0 1356 aa11.2□□□□□ -0.62
NPHP3-204ENST00000469232 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
NPHP3-204ENST00000469232 NSD2O96028 1365 aa11.2□□□□□ -0.62
NPHP3-204ENST00000469232 MSH6P52701 1360 aa11.2□□□□□ -0.62
NPHP3-204ENST00000469232 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
NPHP3-204ENST00000469232 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
NPHP3-204ENST00000469232 PRKRIP1Q9H875 184 aaPredicted RBP11.2□□□□□ -0.62
NPHP3-204ENST00000469232 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
NPHP3-204ENST00000469232 NSD3Q9BZ95 1437 aa11.19□□□□□ -0.62
NPHP3-204ENST00000469232 RBM33Q96EV2 1170 aaKnown RBP11.19□□□□□ -0.62
NPHP3-204ENST00000469232 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
NPHP3-204ENST00000469232 USP6P35125 1406 aa11.18□□□□□ -0.62
NPHP3-204ENST00000469232 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
NPHP3-204ENST00000469232 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
NPHP3-204ENST00000469232 ACEP12821 1306 aa11.17□□□□□ -0.62
NPHP3-204ENST00000469232 RALBP1Q15311 655 aa11.17□□□□□ -0.62
NPHP3-204ENST00000469232 HDGFL2Q7Z4V5 671 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-204ENST00000469232 KNSTRNQ9Y448 316 aa11.17□□□□□ -0.62
NPHP3-204ENST00000469232 MIER1Q8N108 512 aa11.17□□□□□ -0.62
NPHP3-204ENST00000469232 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
NPHP3-204ENST00000469232 CGNL1Q0VF96 1302 aa11.16□□□□□ -0.62
NPHP3-204ENST00000469232 ANKRD26Q9UPS8 1709 aa11.16□□□□□ -0.62
NPHP3-204ENST00000469232 ANP32CO43423 234 aa11.16□□□□□ -0.62
NPHP3-204ENST00000469232 ATF3P18847 181 aa11.16□□□□□ -0.62
NPHP3-204ENST00000469232 CCER2I3L3R5 266 aa11.15□□□□□ -0.62
NPHP3-204ENST00000469232 USP31Q70CQ4 1352 aa11.15□□□□□ -0.63
NPHP3-204ENST00000469232 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
NPHP3-204ENST00000469232 FYB1O15117 783 aa11.14□□□□□ -0.63
NPHP3-204ENST00000469232 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
NPHP3-204ENST00000469232 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
NPHP3-204ENST00000469232 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
NPHP3-204ENST00000469232 KIF20BQ96Q89 1820 aa11.13□□□□□ -0.63
NPHP3-204ENST00000469232 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
NPHP3-204ENST00000469232 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
NPHP3-204ENST00000469232 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
NPHP3-204ENST00000469232 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
NPHP3-204ENST00000469232 SLAIN2Q9P270 581 aa11.12□□□□□ -0.63
NPHP3-204ENST00000469232 ESCO1Q5FWF5 840 aa11.11□□□□□ -0.63
NPHP3-204ENST00000469232 BRINP3Q76B58 766 aa11.11□□□□□ -0.63
NPHP3-204ENST00000469232 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
NPHP3-204ENST00000469232 SBNO1A3KN83 1393 aa11.11□□□□□ -0.63
NPHP3-204ENST00000469232 PXDNQ92626 1479 aa11.11□□□□□ -0.63
NPHP3-204ENST00000469232 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
NPHP3-204ENST00000469232 MYBBP1AQ9BQG0 1328 aaKnown RBP11.11□□□□□ -0.63
NPHP3-204ENST00000469232 NHSL1Q5SYE7 1610 aa11.11□□□□□ -0.63
NPHP3-204ENST00000469232 MARF1Q9Y4F3 1742 aaKnown RBP11.11□□□□□ -0.63
NPHP3-204ENST00000469232 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
NPHP3-204ENST00000469232 NGDNQ8NEJ9 315 aaKnown RBP11.1□□□□□ -0.63
NPHP3-204ENST00000469232 ALS2Q96Q42 1657 aa11.1□□□□□ -0.63
NPHP3-204ENST00000469232 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
NPHP3-204ENST00000469232 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
NPHP3-204ENST00000469232 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
NPHP3-204ENST00000469232 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
NPHP3-204ENST00000469232 INSRP06213 1382 aa11.09□□□□□ -0.63
NPHP3-204ENST00000469232 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
NPHP3-204ENST00000469232 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
NPHP3-204ENST00000469232 NLRP13Q86W25 1043 aa11.09□□□□□ -0.63
NPHP3-204ENST00000469232 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
NPHP3-204ENST00000469232 PPP2R1AP30153 589 aa11.08□□□□□ -0.64
NPHP3-204ENST00000469232 NME9Q86XW9 330 aa11.08□□□□□ -0.64
NPHP3-204ENST00000469232 FOXO3O43524 673 aa11.07□□□□□ -0.64
NPHP3-204ENST00000469232 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
NPHP3-204ENST00000469232 USP19O94966 1318 aa11.07□□□□□ -0.64
NPHP3-204ENST00000469232 PNPLA6Q8IY17 1366 aa11.07□□□□□ -0.64
NPHP3-204ENST00000469232 KRT28Q7Z3Y7 464 aa11.06□□□□□ -0.64
NPHP3-204ENST00000469232 MORC1Q86VD1 984 aa11.06□□□□□ -0.64
NPHP3-204ENST00000469232 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
NPHP3-204ENST00000469232 SLIT3O75094 1523 aa11.06□□□□□ -0.64
NPHP3-204ENST00000469232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.06□□□□□ -0.64
NPHP3-204ENST00000469232 TNS3Q68CZ2 1445 aa11.05□□□□□ -0.64
NPHP3-204ENST00000469232 ROBO1Q9Y6N7 1651 aa11.05□□□□□ -0.64
NPHP3-204ENST00000469232 PSME1Q06323 249 aa11.05□□□□□ -0.64
NPHP3-204ENST00000469232 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
NPHP3-204ENST00000469232 SPATA31A3Q5VYP0 1347 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms