RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.252e-9■■■□□ 17.1
TRAPPC12-215ENST00000469147 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-215ENST00000469147 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-215ENST00000469147 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
TRAPPC12-215ENST00000469147 RGS12O14924 1447 aa13.49□□□□□ -0.25
TRAPPC12-215ENST00000469147 A0A0G2JS52 829 aa13.49□□□□□ -0.25
TRAPPC12-215ENST00000469147 MYT1Q01538 1121 aa13.49□□□□□ -0.25
TRAPPC12-215ENST00000469147 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
TRAPPC12-215ENST00000469147 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-215ENST00000469147 TMF1P82094 1093 aa13.47□□□□□ -0.25
TRAPPC12-215ENST00000469147 CDCA8Q53HL2 280 aa13.47□□□□□ -0.25
TRAPPC12-215ENST00000469147 CCDC125Q86Z20 511 aa13.47□□□□□ -0.25
TRAPPC12-215ENST00000469147 GJD4Q96KN9 370 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-215ENST00000469147 BCL9LQ86UU0 1499 aa13.47□□□□□ -0.25
TRAPPC12-215ENST00000469147 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
TRAPPC12-215ENST00000469147 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
TRAPPC12-215ENST00000469147 ABCA3Q99758 1704 aa13.46□□□□□ -0.25
TRAPPC12-215ENST00000469147 ALS2Q96Q42 1657 aa13.46□□□□□ -0.26
TRAPPC12-215ENST00000469147 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.26
TRAPPC12-215ENST00000469147 PPIP5K1Q6PFW1 1433 aa13.46□□□□□ -0.26
TRAPPC12-215ENST00000469147 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-215ENST00000469147 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
TRAPPC12-215ENST00000469147 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
TRAPPC12-215ENST00000469147 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
TRAPPC12-215ENST00000469147 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
TRAPPC12-215ENST00000469147 ACEP12821 1306 aa13.44□□□□□ -0.26
TRAPPC12-215ENST00000469147 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-215ENST00000469147 BRD4O60885 1362 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC12-215ENST00000469147 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
TRAPPC12-215ENST00000469147 NGDNQ8NEJ9 315 aaKnown RBP13.43□□□□□ -0.26
TRAPPC12-215ENST00000469147 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
TRAPPC12-215ENST00000469147 ATRNO75882 1429 aa13.42□□□□□ -0.26
TRAPPC12-215ENST00000469147 SLIT2O94813 1529 aa13.41□□□□□ -0.26
TRAPPC12-215ENST00000469147 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-215ENST00000469147 CABP1Q9NZU7 370 aa13.41□□□□□ -0.26
TRAPPC12-215ENST00000469147 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-215ENST00000469147 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
TRAPPC12-215ENST00000469147 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-215ENST00000469147 SEPT12Q8IYM1 358 aa13.39□□□□□ -0.27
TRAPPC12-215ENST00000469147 AKAP12Q02952 1782 aa13.39□□□□□ -0.27
TRAPPC12-215ENST00000469147 USP6P35125 1406 aa13.39□□□□□ -0.27
TRAPPC12-215ENST00000469147 GLI3P10071 1580 aa13.38□□□□□ -0.27
TRAPPC12-215ENST00000469147 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
TRAPPC12-215ENST00000469147 MON2Q7Z3U7 1717 aa13.37□□□□□ -0.27
TRAPPC12-215ENST00000469147 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
TRAPPC12-215ENST00000469147 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
TRAPPC12-215ENST00000469147 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 VPS72Q15906 364 aa13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 SSH2Q76I76 1423 aa13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 NRKQ7Z2Y5 1582 aa13.36□□□□□ -0.27
TRAPPC12-215ENST00000469147 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-215ENST00000469147 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
TRAPPC12-215ENST00000469147 BRWD3Q6RI45 1802 aa13.35□□□□□ -0.27
TRAPPC12-215ENST00000469147 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
TRAPPC12-215ENST00000469147 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
TRAPPC12-215ENST00000469147 MYOM1P52179 1685 aa13.34□□□□□ -0.27
TRAPPC12-215ENST00000469147 A0A1W2PP64 1363 aa13.34□□□□□ -0.27
TRAPPC12-215ENST00000469147 EDC4Q6P2E9 1401 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-215ENST00000469147 ZC3H6P61129 1189 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-215ENST00000469147 BTG4Q9NY30 223 aa13.34□□□□□ -0.27
TRAPPC12-215ENST00000469147 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-215ENST00000469147 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.27
TRAPPC12-215ENST00000469147 BAG6P46379 1132 aa13.33□□□□□ -0.28
TRAPPC12-215ENST00000469147 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-215ENST00000469147 DEFB132Q7Z7B7 95 aa13.33□□□□□ -0.28
TRAPPC12-215ENST00000469147 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
TRAPPC12-215ENST00000469147 EP400Q96L91 3159 aa13.32□□□□□ -0.28
TRAPPC12-215ENST00000469147 TTC21BQ7Z4L5 1316 aa13.32□□□□□ -0.28
TRAPPC12-215ENST00000469147 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-215ENST00000469147 EVA1CP58658 441 aa13.31□□□□□ -0.28
TRAPPC12-215ENST00000469147 ABTB2Q8N961 1025 aa13.31□□□□□ -0.28
TRAPPC12-215ENST00000469147 PIK3C2AO00443 1686 aa13.31□□□□□ -0.28
TRAPPC12-215ENST00000469147 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
TRAPPC12-215ENST00000469147 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
TRAPPC12-215ENST00000469147 USP19O94966 1318 aa13.3□□□□□ -0.28
TRAPPC12-215ENST00000469147 KIF7Q2M1P5 1343 aa13.3□□□□□ -0.28
TRAPPC12-215ENST00000469147 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
TRAPPC12-215ENST00000469147 USP54Q70EL1 1684 aa13.29□□□□□ -0.28
TRAPPC12-215ENST00000469147 CAMTA1Q9Y6Y1 1673 aa13.29□□□□□ -0.28
TRAPPC12-215ENST00000469147 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-215ENST00000469147 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
TRAPPC12-215ENST00000469147 COL14A1Q05707 1796 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-215ENST00000469147 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
TRAPPC12-215ENST00000469147 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
TRAPPC12-215ENST00000469147 USP31Q70CQ4 1352 aa13.28□□□□□ -0.28
TRAPPC12-215ENST00000469147 CCDC7Q96M83 1385 aa13.28□□□□□ -0.28
TRAPPC12-215ENST00000469147 GCP02774 474 aa13.27□□□□□ -0.29
TRAPPC12-215ENST00000469147 NLRP6P59044 892 aa13.27□□□□□ -0.29
TRAPPC12-215ENST00000469147 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.29
TRAPPC12-215ENST00000469147 SLIT3O75094 1523 aa13.27□□□□□ -0.29
TRAPPC12-215ENST00000469147 COL18A1P39060 1754 aa13.27□□□□□ -0.29
TRAPPC12-215ENST00000469147 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
TRAPPC12-215ENST00000469147 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC12-215ENST00000469147 FBLN1P23142 703 aa13.26□□□□□ -0.29
TRAPPC12-215ENST00000469147 NME9Q86XW9 330 aa13.26□□□□□ -0.29
TRAPPC12-215ENST00000469147 LMO7Q8WWI1 1683 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms