RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ZBTB3Q9H5J0 574 aa9.74□□□□□ -0.85
SCFD1-205ENST00000469043 RIC3Q7Z5B4 369 aa9.73□□□□□ -0.85
SCFD1-205ENST00000469043 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
SCFD1-205ENST00000469043 PRPF38BQ5VTL8 546 aaKnown RBP9.72□□□□□ -0.85
SCFD1-205ENST00000469043 MPNDQ8N594 471 aa9.72□□□□□ -0.85
SCFD1-205ENST00000469043 HRCP23327 699 aa9.71□□□□□ -0.86
SCFD1-205ENST00000469043 WIPF1O43516 503 aa9.7□□□□□ -0.86
SCFD1-205ENST00000469043 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-205ENST00000469043 SLC16A10Q8TF71 515 aa9.7□□□□□ -0.86
SCFD1-205ENST00000469043 CFAP99D6REC4 459 aa9.69□□□□□ -0.86
SCFD1-205ENST00000469043 FAM174AQ8TBP5 190 aa9.69□□□□□ -0.86
SCFD1-205ENST00000469043 TLL2Q9Y6L7 1015 aa9.69□□□□□ -0.86
SCFD1-205ENST00000469043 BMP1P13497 986 aa9.68□□□□□ -0.86
SCFD1-205ENST00000469043 TRIM46Q7Z4K8 759 aa9.68□□□□□ -0.86
SCFD1-205ENST00000469043 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
SCFD1-205ENST00000469043 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
SCFD1-205ENST00000469043 NNTQ13423 1086 aa9.67□□□□□ -0.86
SCFD1-205ENST00000469043 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
SCFD1-205ENST00000469043 NUTM2DQ5VT03 806 aaPredicted RBP9.67□□□□□ -0.86
SCFD1-205ENST00000469043 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
SCFD1-205ENST00000469043 PDE4DQ08499 809 aa9.66□□□□□ -0.86
SCFD1-205ENST00000469043 CABLES1Q8TDN4 633 aa9.66□□□□□ -0.86
SCFD1-205ENST00000469043 TSC1Q92574 1164 aa9.66□□□□□ -0.86
SCFD1-205ENST00000469043 NXF1Q9UBU9 619 aaKnown RBP9.66□□□□□ -0.86
SCFD1-205ENST00000469043 AGERQ15109 404 aa9.65□□□□□ -0.86
SCFD1-205ENST00000469043 MAP10Q9P2G4 905 aa9.65□□□□□ -0.86
SCFD1-205ENST00000469043 STK17AQ9UEE5 414 aa9.65□□□□□ -0.86
SCFD1-205ENST00000469043 ADH1CP00326 375 aa9.64□□□□□ -0.87
SCFD1-205ENST00000469043 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
SCFD1-205ENST00000469043 SCARF1Q14162 830 aa9.64□□□□□ -0.87
SCFD1-205ENST00000469043 ARID5BQ14865 1188 aa9.64□□□□□ -0.87
SCFD1-205ENST00000469043 NPAS3Q8IXF0 933 aa9.64□□□□□ -0.87
SCFD1-205ENST00000469043 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
SCFD1-205ENST00000469043 TUSC1Q2TAM9 212 aa9.63□□□□□ -0.87
SCFD1-205ENST00000469043 MYSM1Q5VVJ2 828 aa9.63□□□□□ -0.87
SCFD1-205ENST00000469043 BPHLQ86WA6 291 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-205ENST00000469043 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
SCFD1-205ENST00000469043 FOXJ1Q92949 421 aa9.63□□□□□ -0.87
SCFD1-205ENST00000469043 ZFP42Q96MM3 310 aa9.63□□□□□ -0.87
SCFD1-205ENST00000469043 CDK15Q96Q40 435 aa9.62□□□□□ -0.87
SCFD1-205ENST00000469043 TIMP2P16035 220 aa9.61□□□□□ -0.87
SCFD1-205ENST00000469043 MRPL14Q6P1L8 145 aaKnown RBP9.61□□□□□ -0.87
SCFD1-205ENST00000469043 RSPH6AQ9H0K4 717 aa9.61□□□□□ -0.87
SCFD1-205ENST00000469043 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
SCFD1-205ENST00000469043 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-205ENST00000469043 LILRB3O75022 631 aa9.6□□□□□ -0.87
SCFD1-205ENST00000469043 NR5A1Q13285 461 aa9.6□□□□□ -0.87
SCFD1-205ENST00000469043 HELBQ8NG08 1087 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-205ENST00000469043 IRF7Q92985 503 aa9.6□□□□□ -0.87
SCFD1-205ENST00000469043 SLC24A3Q9HC58 644 aa9.6□□□□□ -0.87
SCFD1-205ENST00000469043 QPCTQ16769 361 aa9.59□□□□□ -0.87
SCFD1-205ENST00000469043 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
SCFD1-205ENST00000469043 PURBQ96QR8 312 aaKnown RBP9.58□□□□□ -0.88
SCFD1-205ENST00000469043 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
SCFD1-205ENST00000469043 KLF16Q9BXK1 252 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-205ENST00000469043 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
SCFD1-205ENST00000469043 ZIC2O95409 532 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-205ENST00000469043 CLK2P49760 499 aaKnown RBP9.56□□□□□ -0.88
SCFD1-205ENST00000469043 H3BM21 787 aa9.55□□□□□ -0.88
SCFD1-205ENST00000469043 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
SCFD1-205ENST00000469043 RTL5Q5HYW3 569 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-205ENST00000469043 UPP2O95045 317 aa9.54□□□□□ -0.88
SCFD1-205ENST00000469043 GMPRP36959 345 aa9.54□□□□□ -0.88
SCFD1-205ENST00000469043 GRM5P41594 1212 aa9.54□□□□□ -0.88
SCFD1-205ENST00000469043 VEGFBP49765 207 aa9.54□□□□□ -0.88
SCFD1-205ENST00000469043 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
SCFD1-205ENST00000469043 ITPKCQ96DU7 683 aa9.53□□□□□ -0.88
SCFD1-205ENST00000469043 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
SCFD1-205ENST00000469043 NR3C2P08235 984 aa9.52□□□□□ -0.89
SCFD1-205ENST00000469043 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.89
SCFD1-205ENST00000469043 GPKOWQ92917 476 aaPredicted RBP eCLIP9.52□□□□□ -0.89
SCFD1-205ENST00000469043 MAN1A2O60476 641 aa9.51□□□□□ -0.89
SCFD1-205ENST00000469043 C6orf118Q5T5N4 469 aa9.51□□□□□ -0.89
SCFD1-205ENST00000469043 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
SCFD1-205ENST00000469043 MAP4K5Q9Y4K4 846 aa9.51□□□□□ -0.89
SCFD1-205ENST00000469043 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
SCFD1-205ENST00000469043 TRMT44Q8IYL2 757 aaKnown RBP9.5□□□□□ -0.89
SCFD1-205ENST00000469043 C1QTNF2Q9BXJ5 285 aa9.5□□□□□ -0.89
SCFD1-205ENST00000469043 BMP2P12643 396 aa9.49□□□□□ -0.89
SCFD1-205ENST00000469043 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
SCFD1-205ENST00000469043 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
SCFD1-205ENST00000469043 FSHRP23945 695 aa9.48□□□□□ -0.89
SCFD1-205ENST00000469043 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
SCFD1-205ENST00000469043 ATP1B4Q9UN42 357 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-205ENST00000469043 EMILIN1Q9Y6C2 1016 aa9.48□□□□□ -0.89
SCFD1-205ENST00000469043 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
SCFD1-205ENST00000469043 LINC00528Q8N1L1 170 aa9.47□□□□□ -0.89
SCFD1-205ENST00000469043 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
SCFD1-205ENST00000469043 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
SCFD1-205ENST00000469043 SKIV2LQ15477 1246 aaKnown RBP9.46□□□□□ -0.9
SCFD1-205ENST00000469043 CCDC116Q8IYX3 515 aa9.46□□□□□ -0.9
SCFD1-205ENST00000469043 MEIOBQ8N635 442 aa9.46□□□□□ -0.9
SCFD1-205ENST00000469043 PDXDC2PQ6P474 469 aa9.45□□□□□ -0.9
SCFD1-205ENST00000469043 TSEN34Q9BSV6 310 aaKnown RBP9.45□□□□□ -0.9
SCFD1-205ENST00000469043 ERFEQ4G0M1 354 aa9.44□□□□□ -0.9
SCFD1-205ENST00000469043 ARHGAP9Q9BRR9 750 aa9.44□□□□□ -0.9
SCFD1-205ENST00000469043 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
SCFD1-205ENST00000469043 FKBPLQ9UIM3 349 aa9.43□□□□□ -0.9
SCFD1-205ENST00000469043 CDV3Q9UKY7 258 aaKnown RBP9.43□□□□□ -0.9
SCFD1-205ENST00000469043 ZBTB33Q86T24 672 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms