RNA–Protein interactions for RNA: ENST00000468529.1

KCNIP3-205, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNIP3, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-205ENST00000468529 RALGAPBQ86X10 1494 aa27.59■■■□□ 2.01
KCNIP3-205ENST00000468529 SRPK2P78362 688 aaKnown RBP27.58■■■□□ 2.01
KCNIP3-205ENST00000468529 CCDC9Q9Y3X0 531 aaKnown RBP27.57■■■□□ 2
KCNIP3-205ENST00000468529 CCDC61Q9Y6R9 512 aa27.57■■■□□ 2
KCNIP3-205ENST00000468529 COL14A1Q05707 1796 aaKnown RBP27.56■■■□□ 2
KCNIP3-205ENST00000468529 ACEP12821 1306 aa27.56■■■□□ 2
KCNIP3-205ENST00000468529 ROCK2O75116 1388 aaKnown RBP27.56■■■□□ 2
KCNIP3-205ENST00000468529 NRAPQ86VF7 1730 aa27.55■■■□□ 2
KCNIP3-205ENST00000468529 FAM83GA6ND36 823 aa27.54■■■□□ 2
KCNIP3-205ENST00000468529 POLR3AO14802 1390 aaPredicted RBP27.54■■■□□ 2
KCNIP3-205ENST00000468529 BRWD3Q6RI45 1802 aa27.54■■■□□ 2
KCNIP3-205ENST00000468529 PHRF1Q9P1Y6 1649 aaKnown RBP27.53■■■□□ 2
KCNIP3-205ENST00000468529 CABP2Q9NPB3 220 aa27.53■■■□□ 2
KCNIP3-205ENST00000468529 PPIP5K1Q6PFW1 1433 aa27.52■■■□□ 2
KCNIP3-205ENST00000468529 VPS72Q15906 364 aa27.52■■■□□ 2
KCNIP3-205ENST00000468529 PLEKHG3A1L390 1219 aa27.51■■□□□ 1.99
KCNIP3-205ENST00000468529 NBPF8Q3BBV2 869 aa27.51■■□□□ 1.99
KCNIP3-205ENST00000468529 NUTM2GQ5VZR2 741 aa27.5■■□□□ 1.99
KCNIP3-205ENST00000468529 TRIM26Q12899 539 aaPredicted RBP27.49■■□□□ 1.99
KCNIP3-205ENST00000468529 BTG4Q9NY30 223 aa27.49■■□□□ 1.99
KCNIP3-205ENST00000468529 PRDM11Q9NQV5 511 aa27.47■■□□□ 1.99
KCNIP3-205ENST00000468529 TONSLQ96HA7 1378 aa27.46■■□□□ 1.99
KCNIP3-205ENST00000468529 EVC2Q86UK5 1308 aa27.44■■□□□ 1.98
KCNIP3-205ENST00000468529 A0A0G2JS52 829 aa27.43■■□□□ 1.98
KCNIP3-205ENST00000468529 MYT1Q01538 1121 aa27.43■■□□□ 1.98
KCNIP3-205ENST00000468529 SEPT12Q8IYM1 358 aa27.43■■□□□ 1.98
KCNIP3-205ENST00000468529 ABTB2Q8N961 1025 aa27.43■■□□□ 1.98
KCNIP3-205ENST00000468529 KIAA0232Q92628 1395 aa27.43■■□□□ 1.98
KCNIP3-205ENST00000468529 NRKQ7Z2Y5 1582 aa27.41■■□□□ 1.98
KCNIP3-205ENST00000468529 CABP1Q9NZU7 370 aa27.41■■□□□ 1.98
KCNIP3-205ENST00000468529 ZC3H6P61129 1189 aaKnown RBP27.4■■□□□ 1.98
KCNIP3-205ENST00000468529 CHRNA2Q15822 529 aa27.4■■□□□ 1.98
KCNIP3-205ENST00000468529 EP400Q96L91 3159 aa27.4■■□□□ 1.98
KCNIP3-205ENST00000468529 USP6P35125 1406 aa27.37■■□□□ 1.97
KCNIP3-205ENST00000468529 FAM98CQ17RN3 349 aaKnown RBP27.37■■□□□ 1.97
KCNIP3-205ENST00000468529 CARD11Q9BXL7 1154 aa27.37■■□□□ 1.97
KCNIP3-205ENST00000468529 AKAP12Q02952 1782 aa27.35■■□□□ 1.97
KCNIP3-205ENST00000468529 BRD4O60885 1362 aaPredicted RBP27.35■■□□□ 1.97
KCNIP3-205ENST00000468529 ONECUT3O60422 494 aaPredicted RBP27.34■■□□□ 1.97
KCNIP3-205ENST00000468529 NLRP13Q86W25 1043 aa27.34■■□□□ 1.97
KCNIP3-205ENST00000468529 STRN4Q9NRL3 753 aa27.34■■□□□ 1.97
KCNIP3-205ENST00000468529 USP19O94966 1318 aa27.34■■□□□ 1.97
KCNIP3-205ENST00000468529 SPATA31A5Q5VU36 1347 aa27.34■■□□□ 1.97
KCNIP3-205ENST00000468529 SPATA31A7Q8IWB4 1347 aa27.34■■□□□ 1.97
KCNIP3-205ENST00000468529 KRT27Q7Z3Y8 459 aa27.33■■□□□ 1.97
KCNIP3-205ENST00000468529 CCDC125Q86Z20 511 aa27.33■■□□□ 1.97
KCNIP3-205ENST00000468529 PIK3C2AO00443 1686 aa27.31■■□□□ 1.96
KCNIP3-205ENST00000468529 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
KCNIP3-205ENST00000468529 THSD7AQ9UPZ6 1657 aa27.29■■□□□ 1.96
KCNIP3-205ENST00000468529 LMO7Q8WWI1 1683 aa27.28■■□□□ 1.96
KCNIP3-205ENST00000468529 CPDO75976 1380 aa27.28■■□□□ 1.96
KCNIP3-205ENST00000468529 EVA1CP58658 441 aa27.28■■□□□ 1.96
KCNIP3-205ENST00000468529 NLRP6P59044 892 aa27.28■■□□□ 1.96
KCNIP3-205ENST00000468529 SBNO2Q9Y2G9 1366 aa27.27■■□□□ 1.96
KCNIP3-205ENST00000468529 ZBTB7CA1YPR0 619 aa27.27■■□□□ 1.96
KCNIP3-205ENST00000468529 GCP02774 474 aa27.27■■□□□ 1.96
KCNIP3-205ENST00000468529 CAMTA1Q9Y6Y1 1673 aa27.27■■□□□ 1.96
KCNIP3-205ENST00000468529 SPATA31A1Q5TZJ5 1347 aa27.26■■□□□ 1.95
KCNIP3-205ENST00000468529 SF3B2Q13435 895 aaKnown RBP27.26■■□□□ 1.95
KCNIP3-205ENST00000468529 SSH2Q76I76 1423 aa27.25■■□□□ 1.95
KCNIP3-205ENST00000468529 MON2Q7Z3U7 1717 aa27.24■■□□□ 1.95
KCNIP3-205ENST00000468529 ZNF692Q9BU19 519 aaPredicted RBP27.24■■□□□ 1.95
KCNIP3-205ENST00000468529 USP35Q9P2H5 1018 aa27.24■■□□□ 1.95
KCNIP3-205ENST00000468529 SLIT3O75094 1523 aa27.24■■□□□ 1.95
KCNIP3-205ENST00000468529 KTN1Q86UP2 1357 aaKnown RBP27.22■■□□□ 1.95
KCNIP3-205ENST00000468529 TTC21BQ7Z4L5 1316 aa27.21■■□□□ 1.95
KCNIP3-205ENST00000468529 CPSF1Q10570 1443 aaKnown RBP27.19■■□□□ 1.94
KCNIP3-205ENST00000468529 FAM182BQ5T319 152 aa27.19■■□□□ 1.94
KCNIP3-205ENST00000468529 LARP1Q6PKG0 1096 aaKnown RBP27.19■■□□□ 1.94
KCNIP3-205ENST00000468529 DEFB132Q7Z7B7 95 aa27.19■■□□□ 1.94
KCNIP3-205ENST00000468529 RGPD1P0DJD0 1748 aa27.19■■□□□ 1.94
KCNIP3-205ENST00000468529 TMC1Q8TDI8 760 aa27.18■■□□□ 1.94
KCNIP3-205ENST00000468529 ZRANB1Q9UGI0 708 aa27.18■■□□□ 1.94
KCNIP3-205ENST00000468529 TTC21AQ8NDW8 1320 aa27.17■■□□□ 1.94
KCNIP3-205ENST00000468529 COL5A2P05997 1499 aaPredicted RBP27.17■■□□□ 1.94
KCNIP3-205ENST00000468529 SOX12O15370 315 aa27.16■■□□□ 1.94
KCNIP3-205ENST00000468529 RGPD5Q99666 1765 aa27.15■■□□□ 1.94
KCNIP3-205ENST00000468529 COL18A1P39060 1754 aa27.14■■□□□ 1.94
KCNIP3-205ENST00000468529 AATKQ6ZMQ8 1374 aa27.14■■□□□ 1.94
KCNIP3-205ENST00000468529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.13■■□□□ 1.93
KCNIP3-205ENST00000468529 TCP11L2Q8N4U5 519 aa27.13■■□□□ 1.93
KCNIP3-205ENST00000468529 BARGINQ6ZT62 677 aa27.12■■□□□ 1.93
KCNIP3-205ENST00000468529 BAG6P46379 1132 aa27.11■■□□□ 1.93
KCNIP3-205ENST00000468529 HDGFL2Q7Z4V5 671 aaPredicted RBP27.11■■□□□ 1.93
KCNIP3-205ENST00000468529 KCNH5Q8NCM2 988 aa27.11■■□□□ 1.93
KCNIP3-205ENST00000468529 CD163L1Q9NR16 1453 aa27.11■■□□□ 1.93
KCNIP3-205ENST00000468529 TNS1Q9HBL0 1735 aaKnown RBP27.1■■□□□ 1.93
KCNIP3-205ENST00000468529 CRB1P82279 1406 aa27.1■■□□□ 1.93
KCNIP3-205ENST00000468529 ST20-MTHFSA0A0A6YYL1 179 aa27.1■■□□□ 1.93
KCNIP3-205ENST00000468529 SLC12A5Q9H2X9 1139 aa27.09■■□□□ 1.93
KCNIP3-205ENST00000468529 PARP4Q9UKK3 1724 aaKnown RBP27.09■■□□□ 1.93
KCNIP3-205ENST00000468529 NFAT5O94916 1531 aa27.08■■□□□ 1.93
KCNIP3-205ENST00000468529 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
KCNIP3-205ENST00000468529 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
KCNIP3-205ENST00000468529 THRAP3Q9Y2W1 955 aaKnown RBP27.08■■□□□ 1.93
KCNIP3-205ENST00000468529 USP54Q70EL1 1684 aa27.08■■□□□ 1.92
KCNIP3-205ENST00000468529 WNK3Q9BYP7 1800 aa27.06■■□□□ 1.92
KCNIP3-205ENST00000468529 TOM1L2Q6ZVM7 507 aa27.06■■□□□ 1.92
KCNIP3-205ENST00000468529 ARHGEF25Q86VW2 580 aa27.06■■□□□ 1.92
KCNIP3-205ENST00000468529 TESK2Q96S53 571 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms