RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 ACEP12821 1306 aa10.73□□□□□ -0.69
SND1-206ENST00000468166 POLR3AO14802 1390 aaPredicted RBP10.73□□□□□ -0.69
SND1-206ENST00000468166 SHPRHQ149N8 1683 aa10.73□□□□□ -0.69
SND1-206ENST00000468166 FYB1O15117 783 aa10.72□□□□□ -0.69
SND1-206ENST00000468166 TNNT2P45379 298 aaPredicted RBP10.72□□□□□ -0.69
SND1-206ENST00000468166 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
SND1-206ENST00000468166 DCCP43146 1447 aa10.72□□□□□ -0.69
SND1-206ENST00000468166 NCOA3Q9Y6Q9 1424 aa10.72□□□□□ -0.69
SND1-206ENST00000468166 NGDNQ8NEJ9 315 aaKnown RBP10.71□□□□□ -0.69
SND1-206ENST00000468166 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
SND1-206ENST00000468166 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
SND1-206ENST00000468166 PIK3C2AO00443 1686 aa10.7□□□□□ -0.7
SND1-206ENST00000468166 WDR43Q15061 677 aaKnown RBP eCLIP10.7□□□□□ -0.7
SND1-206ENST00000468166 NME9Q86XW9 330 aa10.7□□□□□ -0.7
SND1-206ENST00000468166 USP54Q70EL1 1684 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
SND1-206ENST00000468166 SSH2Q76I76 1423 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 INSRP06213 1382 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 TTC21BQ7Z4L5 1316 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 TTC21AQ8NDW8 1320 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 CFAP53Q96M91 514 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 C19orf44Q9H6X5 657 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 PHF8Q9UPP1 1060 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 DMRT2Q9Y5R5 561 aa10.69□□□□□ -0.7
SND1-206ENST00000468166 LRRC7Q96NW7 1537 aa10.68□□□□□ -0.7
SND1-206ENST00000468166 MSH6P52701 1360 aa10.68□□□□□ -0.7
SND1-206ENST00000468166 COG3Q96JB2 828 aa10.68□□□□□ -0.7
SND1-206ENST00000468166 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
SND1-206ENST00000468166 OVOS2A0A0J9YW53 1432 aa10.67□□□□□ -0.7
SND1-206ENST00000468166 OVOS2Q6IE36 1432 aa10.67□□□□□ -0.7
SND1-206ENST00000468166 MARF1Q9Y4F3 1742 aaKnown RBP10.67□□□□□ -0.7
SND1-206ENST00000468166 ZBED9Q6R2W3 1325 aa10.67□□□□□ -0.7
SND1-206ENST00000468166 ZNF335Q9H4Z2 1342 aaPredicted RBP10.67□□□□□ -0.7
SND1-206ENST00000468166 ATF3P18847 181 aa10.67□□□□□ -0.7
SND1-206ENST00000468166 MTHFSP49914 203 aa10.67□□□□□ -0.7
SND1-206ENST00000468166 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
SND1-206ENST00000468166 MST1RQ04912 1400 aa10.67□□□□□ -0.7
SND1-206ENST00000468166 COL3A1P02461 1466 aaPredicted RBP10.66□□□□□ -0.7
SND1-206ENST00000468166 SMG6Q86US8 1419 aaKnown RBP10.66□□□□□ -0.7
SND1-206ENST00000468166 AATKQ6ZMQ8 1374 aa10.65□□□□□ -0.7
SND1-206ENST00000468166 TRPM3Q9HCF6 1732 aaPredicted RBP10.65□□□□□ -0.7
SND1-206ENST00000468166 CADPS2Q86UW7 1296 aa10.65□□□□□ -0.7
SND1-206ENST00000468166 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
SND1-206ENST00000468166 CDK12Q9NYV4 1490 aaPredicted RBP10.65□□□□□ -0.7
SND1-206ENST00000468166 ADAMTS8Q9UP79 889 aa10.64□□□□□ -0.71
SND1-206ENST00000468166 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
SND1-206ENST00000468166 PSME1Q06323 249 aa10.63□□□□□ -0.71
SND1-206ENST00000468166 ORAI2Q96SN7 254 aa10.63□□□□□ -0.71
SND1-206ENST00000468166 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
SND1-206ENST00000468166 PNPLA6Q8IY17 1366 aa10.62□□□□□ -0.71
SND1-206ENST00000468166 LTN1O94822 1766 aa10.62□□□□□ -0.71
SND1-206ENST00000468166 PEAK1Q9H792 1746 aa10.61□□□□□ -0.71
SND1-206ENST00000468166 ALS2Q96Q42 1657 aa10.61□□□□□ -0.71
SND1-206ENST00000468166 PPM1GO15355 546 aaPredicted RBP10.61□□□□□ -0.71
SND1-206ENST00000468166 ABTB2Q8N961 1025 aa10.61□□□□□ -0.71
SND1-206ENST00000468166 POLKQ9UBT6 870 aa10.61□□□□□ -0.71
SND1-206ENST00000468166 NUDCQ9Y266 331 aa10.61□□□□□ -0.71
SND1-206ENST00000468166 FOXO3O43524 673 aa10.6□□□□□ -0.71
SND1-206ENST00000468166 NLRP6P59044 892 aa10.6□□□□□ -0.71
SND1-206ENST00000468166 EMILIN1Q9Y6C2 1016 aa10.6□□□□□ -0.71
SND1-206ENST00000468166 SENP3-EIF4A1A0A087X0R7 540 aa10.59□□□□□ -0.71
SND1-206ENST00000468166 DIAPH1O60610 1272 aaKnown RBP10.59□□□□□ -0.71
SND1-206ENST00000468166 FBLN1P23142 703 aa10.59□□□□□ -0.71
SND1-206ENST00000468166 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
SND1-206ENST00000468166 CCDC146Q8IYE0 955 aa10.59□□□□□ -0.71
SND1-206ENST00000468166 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 IQSEC2Q5JU85 1478 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 U2SURPO15042 1029 aaKnown RBP10.58□□□□□ -0.72
SND1-206ENST00000468166 SOX12O15370 315 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 U2AF1L5P0DN76 240 aaPredicted RBP10.58□□□□□ -0.72
SND1-206ENST00000468166 U2AF1Q01081 240 aaKnown RBP eCLIP10.58□□□□□ -0.72
SND1-206ENST00000468166 XPCQ01831 940 aaPredicted RBP10.58□□□□□ -0.72
SND1-206ENST00000468166 NUTM2GQ5VZR2 741 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 KRT28Q7Z3Y7 464 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 PHRF1Q9P1Y6 1649 aaKnown RBP10.58□□□□□ -0.72
SND1-206ENST00000468166 SLIT3O75094 1523 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 NFAT5O94916 1531 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 NPHP3Q7Z494 1330 aa10.58□□□□□ -0.72
SND1-206ENST00000468166 PXDNQ92626 1479 aa10.57□□□□□ -0.72
SND1-206ENST00000468166 SBNO1A3KN83 1393 aa10.57□□□□□ -0.72
SND1-206ENST00000468166 NHSL1Q5SYE7 1610 aa10.57□□□□□ -0.72
SND1-206ENST00000468166 RGPD1P0DJD0 1748 aa10.56□□□□□ -0.72
SND1-206ENST00000468166 FLT4P35916 1363 aa10.56□□□□□ -0.72
SND1-206ENST00000468166 RUNDC1Q96C34 613 aa10.56□□□□□ -0.72
SND1-206ENST00000468166 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
SND1-206ENST00000468166 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
SND1-206ENST00000468166 MAP3K19Q56UN5 1328 aa10.56□□□□□ -0.72
SND1-206ENST00000468166 RTL1A6NKG5 1358 aa10.55□□□□□ -0.72
SND1-206ENST00000468166 KIF24Q5T7B8 1368 aa10.55□□□□□ -0.72
SND1-206ENST00000468166 LMOD2Q6P5Q4 547 aa10.55□□□□□ -0.72
SND1-206ENST00000468166 BRINP3Q76B58 766 aa10.55□□□□□ -0.72
SND1-206ENST00000468166 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
SND1-206ENST00000468166 CRYBG1Q9Y4K1 1723 aa10.55□□□□□ -0.72
SND1-206ENST00000468166 APAF1O14727 1248 aa10.54□□□□□ -0.72
SND1-206ENST00000468166 IL13P35225 146 aa10.54□□□□□ -0.72
SND1-206ENST00000468166 AMPHP49418 695 aa10.54□□□□□ -0.72
SND1-206ENST00000468166 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
SND1-206ENST00000468166 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
SND1-206ENST00000468166 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
SND1-206ENST00000468166 KCNH5Q8NCM2 988 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms