RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 KIF20BQ96Q89 1820 aa19.05■□□□□ 0.64
PRPF38B-204ENST00000467302 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
PRPF38B-204ENST00000467302 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
PRPF38B-204ENST00000467302 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
PRPF38B-204ENST00000467302 EID1Q9Y6B2 187 aa19.02■□□□□ 0.64
PRPF38B-204ENST00000467302 ADGRB2O60241 1585 aa19.02■□□□□ 0.63
PRPF38B-204ENST00000467302 DIP2AQ14689 1571 aa19.02■□□□□ 0.63
PRPF38B-204ENST00000467302 RIMS1Q86UR5 1692 aaKnown RBP19.01■□□□□ 0.63
PRPF38B-204ENST00000467302 IGHDP01880 384 aa19.01■□□□□ 0.63
PRPF38B-204ENST00000467302 RGS3P49796 1198 aa19.01■□□□□ 0.63
PRPF38B-204ENST00000467302 MTHFSP49914 203 aa19.01■□□□□ 0.63
PRPF38B-204ENST00000467302 LTKP29376 864 aa19■□□□□ 0.63
PRPF38B-204ENST00000467302 CFAP53Q96M91 514 aa19■□□□□ 0.63
PRPF38B-204ENST00000467302 CABP1Q9NZU7 370 aa19■□□□□ 0.63
PRPF38B-204ENST00000467302 SLC4A3P48751 1232 aa19■□□□□ 0.63
PRPF38B-204ENST00000467302 TXNDC2Q86VQ3 553 aa19■□□□□ 0.63
PRPF38B-204ENST00000467302 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
PRPF38B-204ENST00000467302 WASLO00401 505 aaPredicted RBP18.99■□□□□ 0.63
PRPF38B-204ENST00000467302 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
PRPF38B-204ENST00000467302 IQSEC2Q5JU85 1478 aa18.98■□□□□ 0.63
PRPF38B-204ENST00000467302 NFKBIBQ15653 356 aa18.97■□□□□ 0.63
PRPF38B-204ENST00000467302 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
PRPF38B-204ENST00000467302 RUNDC1Q96C34 613 aa18.97■□□□□ 0.63
PRPF38B-204ENST00000467302 CDC42BPGQ6DT37 1551 aa18.97■□□□□ 0.63
PRPF38B-204ENST00000467302 FYB1O15117 783 aa18.96■□□□□ 0.63
PRPF38B-204ENST00000467302 CLUAP1Q96AJ1 413 aa18.96■□□□□ 0.63
PRPF38B-204ENST00000467302 GGNBP2Q9H3C7 697 aa18.96■□□□□ 0.63
PRPF38B-204ENST00000467302 ROBO2Q9HCK4 1378 aa18.96■□□□□ 0.63
PRPF38B-204ENST00000467302 PPIP5K1Q6PFW1 1433 aa18.96■□□□□ 0.63
PRPF38B-204ENST00000467302 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
PRPF38B-204ENST00000467302 DAXXQ9UER7 740 aaPredicted RBP18.95■□□□□ 0.62
PRPF38B-204ENST00000467302 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
PRPF38B-204ENST00000467302 ITSN1Q15811 1721 aa18.95■□□□□ 0.62
PRPF38B-204ENST00000467302 MON2Q7Z3U7 1717 aa18.95■□□□□ 0.62
PRPF38B-204ENST00000467302 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
PRPF38B-204ENST00000467302 PANK1Q8TE04 598 aa18.95■□□□□ 0.62
PRPF38B-204ENST00000467302 AKAP12Q02952 1782 aa18.94■□□□□ 0.62
PRPF38B-204ENST00000467302 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
PRPF38B-204ENST00000467302 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
PRPF38B-204ENST00000467302 RARSP54136 660 aaKnown RBP18.94■□□□□ 0.62
PRPF38B-204ENST00000467302 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
PRPF38B-204ENST00000467302 TCP11L2Q8N4U5 519 aa18.93■□□□□ 0.62
PRPF38B-204ENST00000467302 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
PRPF38B-204ENST00000467302 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
PRPF38B-204ENST00000467302 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
PRPF38B-204ENST00000467302 USP19O94966 1318 aa18.93■□□□□ 0.62
PRPF38B-204ENST00000467302 TOPAZ1Q8N9V7 1692 aa18.93■□□□□ 0.62
PRPF38B-204ENST00000467302 PTPRUQ92729 1446 aa18.92■□□□□ 0.62
PRPF38B-204ENST00000467302 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
PRPF38B-204ENST00000467302 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
PRPF38B-204ENST00000467302 TBX22Q9Y458 520 aa18.92■□□□□ 0.62
PRPF38B-204ENST00000467302 AAMPQ13685 434 aa18.91■□□□□ 0.62
PRPF38B-204ENST00000467302 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
PRPF38B-204ENST00000467302 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
PRPF38B-204ENST00000467302 NUDT16Q96DE0 195 aaKnown RBP18.91■□□□□ 0.62
PRPF38B-204ENST00000467302 COL3A1P02461 1466 aaPredicted RBP18.91■□□□□ 0.62
PRPF38B-204ENST00000467302 VIRMAQ69YN4 1812 aaKnown RBP18.91■□□□□ 0.62
PRPF38B-204ENST00000467302 XRN1Q8IZH2 1706 aaKnown RBP18.9■□□□□ 0.62
PRPF38B-204ENST00000467302 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
PRPF38B-204ENST00000467302 RRP7AQ9Y3A4 280 aaKnown RBP18.9■□□□□ 0.62
PRPF38B-204ENST00000467302 CCDC61Q9Y6R9 512 aa18.9■□□□□ 0.62
PRPF38B-204ENST00000467302 GSE1Q14687 1217 aa18.89■□□□□ 0.61
PRPF38B-204ENST00000467302 NEUROD2Q15784 382 aa18.89■□□□□ 0.61
PRPF38B-204ENST00000467302 SLC26A8Q96RN1 970 aa18.89■□□□□ 0.61
PRPF38B-204ENST00000467302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.88■□□□□ 0.61
PRPF38B-204ENST00000467302 FRAT1Q92837 279 aaPredicted RBP18.88■□□□□ 0.61
PRPF38B-204ENST00000467302 U2AF1L5P0DN76 240 aaPredicted RBP18.87■□□□□ 0.61
PRPF38B-204ENST00000467302 U2AF1Q01081 240 aaKnown RBP eCLIP18.87■□□□□ 0.61
PRPF38B-204ENST00000467302 RLBP1P12271 317 aa18.86■□□□□ 0.61
PRPF38B-204ENST00000467302 IL27Q8NEV9 243 aa18.86■□□□□ 0.61
PRPF38B-204ENST00000467302 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
PRPF38B-204ENST00000467302 NRKQ7Z2Y5 1582 aa18.85■□□□□ 0.61
PRPF38B-204ENST00000467302 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
PRPF38B-204ENST00000467302 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
PRPF38B-204ENST00000467302 PRR36Q9H6K5 1346 aa18.85■□□□□ 0.61
PRPF38B-204ENST00000467302 SEC24BO95487 1268 aa18.84■□□□□ 0.61
PRPF38B-204ENST00000467302 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
PRPF38B-204ENST00000467302 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
PRPF38B-204ENST00000467302 TNNQ9UQP3 1299 aa18.83■□□□□ 0.61
PRPF38B-204ENST00000467302 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
PRPF38B-204ENST00000467302 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
PRPF38B-204ENST00000467302 NCKAP5LQ9HCH0 1330 aa18.82■□□□□ 0.6
PRPF38B-204ENST00000467302 SETD1BQ9UPS6 1966 aaKnown RBP18.82■□□□□ 0.6
PRPF38B-204ENST00000467302 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
PRPF38B-204ENST00000467302 FRAT2O75474 233 aaPredicted RBP18.81■□□□□ 0.6
PRPF38B-204ENST00000467302 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
PRPF38B-204ENST00000467302 MAP2P11137 1827 aaKnown RBP18.8■□□□□ 0.6
PRPF38B-204ENST00000467302 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
PRPF38B-204ENST00000467302 AATKQ6ZMQ8 1374 aa18.79■□□□□ 0.6
PRPF38B-204ENST00000467302 PLEKHG3A1L390 1219 aa18.79■□□□□ 0.6
PRPF38B-204ENST00000467302 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
PRPF38B-204ENST00000467302 CT47B1P0C2W7 299 aaPredicted RBP18.78■□□□□ 0.6
PRPF38B-204ENST00000467302 NME9Q86XW9 330 aa18.78■□□□□ 0.6
PRPF38B-204ENST00000467302 POLKQ9UBT6 870 aa18.78■□□□□ 0.6
PRPF38B-204ENST00000467302 PDZRN3Q9UPQ7 1066 aa18.78■□□□□ 0.6
PRPF38B-204ENST00000467302 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.6
PRPF38B-204ENST00000467302 CHD2O14647 1828 aaKnown RBP18.77■□□□□ 0.59
PRPF38B-204ENST00000467302 MVPQ14764 893 aaKnown RBP18.76■□□□□ 0.59
PRPF38B-204ENST00000467302 ANKLE2Q86XL3 938 aa18.76■□□□□ 0.59
PRPF38B-204ENST00000467302 COG3Q96JB2 828 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms