RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
XRN1-206ENST00000467077 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
XRN1-206ENST00000467077 FAM174AQ8TBP5 190 aa11.54□□□□□ -0.56
XRN1-206ENST00000467077 MAN1A2O60476 641 aa11.53□□□□□ -0.56
XRN1-206ENST00000467077 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
XRN1-206ENST00000467077 MTMR2Q13614 643 aa11.51□□□□□ -0.57
XRN1-206ENST00000467077 UPP2O95045 317 aa11.5□□□□□ -0.57
XRN1-206ENST00000467077 CTHP32929 405 aa11.5□□□□□ -0.57
XRN1-206ENST00000467077 DESI1Q6ICB0 168 aa11.5□□□□□ -0.57
XRN1-206ENST00000467077 ARID5BQ14865 1188 aa11.49□□□□□ -0.57
XRN1-206ENST00000467077 C6orf118Q5T5N4 469 aa11.49□□□□□ -0.57
XRN1-206ENST00000467077 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
XRN1-206ENST00000467077 ZIC2O95409 532 aaPredicted RBP11.48□□□□□ -0.57
XRN1-206ENST00000467077 NDUFV2P19404 249 aa11.48□□□□□ -0.57
XRN1-206ENST00000467077 MOXD2PA6NHM9 499 aa11.47□□□□□ -0.57
XRN1-206ENST00000467077 KCNMA1Q12791 1236 aa11.47□□□□□ -0.57
XRN1-206ENST00000467077 SUZ12Q15022 739 aaKnown RBP11.47□□□□□ -0.57
XRN1-206ENST00000467077 SSTR3P32745 418 aaPredicted RBP11.46□□□□□ -0.57
XRN1-206ENST00000467077 ZFAND3Q9H8U3 227 aa11.45□□□□□ -0.58
XRN1-206ENST00000467077 RNF225M0QZC1 329 aaPredicted RBP11.44□□□□□ -0.58
XRN1-206ENST00000467077 BMP2P12643 396 aa11.44□□□□□ -0.58
XRN1-206ENST00000467077 NR5A1Q13285 461 aa11.44□□□□□ -0.58
XRN1-206ENST00000467077 TTLL12Q14166 644 aaPredicted RBP11.44□□□□□ -0.58
XRN1-206ENST00000467077 AGERQ15109 404 aa11.44□□□□□ -0.58
XRN1-206ENST00000467077 CDK15Q96Q40 435 aa11.44□□□□□ -0.58
XRN1-206ENST00000467077 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
XRN1-206ENST00000467077 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
XRN1-206ENST00000467077 KCTD17Q8N5Z5 321 aa11.43□□□□□ -0.58
XRN1-206ENST00000467077 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
XRN1-206ENST00000467077 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
XRN1-206ENST00000467077 LINC00528Q8N1L1 170 aa11.41□□□□□ -0.58
XRN1-206ENST00000467077 FOXJ1Q92949 421 aa11.41□□□□□ -0.58
XRN1-206ENST00000467077 TMEM151AQ8N4L1 468 aa11.4□□□□□ -0.58
XRN1-206ENST00000467077 LYPD8Q6UX82 237 aa11.39□□□□□ -0.59
XRN1-206ENST00000467077 SPTLC1O15269 473 aa11.38□□□□□ -0.59
XRN1-206ENST00000467077 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
XRN1-206ENST00000467077 NR3C2P08235 984 aa11.37□□□□□ -0.59
XRN1-206ENST00000467077 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
XRN1-206ENST00000467077 BPHLQ86WA6 291 aaPredicted RBP11.37□□□□□ -0.59
XRN1-206ENST00000467077 MAP10Q9P2G4 905 aa11.37□□□□□ -0.59
XRN1-206ENST00000467077 GDF11O95390 407 aa11.36□□□□□ -0.59
XRN1-206ENST00000467077 GJA5P36382 358 aa11.35□□□□□ -0.59
XRN1-206ENST00000467077 DNMT3LQ9UJW3 386 aa11.35□□□□□ -0.59
XRN1-206ENST00000467077 RASSF7Q02833 373 aa11.34□□□□□ -0.59
XRN1-206ENST00000467077 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
XRN1-206ENST00000467077 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
XRN1-206ENST00000467077 SOS2Q07890 1332 aaPredicted RBP11.34□□□□□ -0.59
XRN1-206ENST00000467077 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
XRN1-206ENST00000467077 FSHRP23945 695 aa11.33□□□□□ -0.6
XRN1-206ENST00000467077 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
XRN1-206ENST00000467077 CNTNAP3BQ96NU0 1288 aa11.33□□□□□ -0.6
XRN1-206ENST00000467077 TSEN34Q9BSV6 310 aaKnown RBP11.33□□□□□ -0.6
XRN1-206ENST00000467077 CNTNAP3Q9BZ76 1288 aa11.33□□□□□ -0.6
XRN1-206ENST00000467077 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
XRN1-206ENST00000467077 GSK3AP49840 483 aa11.32□□□□□ -0.6
XRN1-206ENST00000467077 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
XRN1-206ENST00000467077 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
XRN1-206ENST00000467077 GRM5P41594 1212 aa11.31□□□□□ -0.6
XRN1-206ENST00000467077 C4orf48Q5BLP8 95 aa11.3□□□□□ -0.6
XRN1-206ENST00000467077 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
XRN1-206ENST00000467077 ADAMTS8Q9UP79 889 aa11.3□□□□□ -0.6
XRN1-206ENST00000467077 AMHR2Q16671 573 aa11.29□□□□□ -0.6
XRN1-206ENST00000467077 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
XRN1-206ENST00000467077 SVOPQ8N4V2 548 aa11.29□□□□□ -0.6
XRN1-206ENST00000467077 ARMC2Q8NEN0 867 aa11.29□□□□□ -0.6
XRN1-206ENST00000467077 TSC1Q92574 1164 aa11.29□□□□□ -0.6
XRN1-206ENST00000467077 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
XRN1-206ENST00000467077 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
XRN1-206ENST00000467077 HRCP23327 699 aa11.28□□□□□ -0.6
XRN1-206ENST00000467077 NBPF14Q5TI25 921 aa11.28□□□□□ -0.6
XRN1-206ENST00000467077 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
XRN1-206ENST00000467077 KRT76Q01546 638 aa11.27□□□□□ -0.61
XRN1-206ENST00000467077 MAP4K5Q9Y4K4 846 aa11.27□□□□□ -0.61
XRN1-206ENST00000467077 PTSQ03393 145 aa11.26□□□□□ -0.61
XRN1-206ENST00000467077 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
XRN1-206ENST00000467077 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
XRN1-206ENST00000467077 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
XRN1-206ENST00000467077 CCDC116Q8IYX3 515 aa11.25□□□□□ -0.61
XRN1-206ENST00000467077 GPR161Q8N6U8 529 aaKnown RBP11.25□□□□□ -0.61
XRN1-206ENST00000467077 C1QTNF2Q9BXJ5 285 aa11.25□□□□□ -0.61
XRN1-206ENST00000467077 MAGEB6P1A0A0J9YX57 407 aa11.24□□□□□ -0.61
XRN1-206ENST00000467077 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
XRN1-206ENST00000467077 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
XRN1-206ENST00000467077 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
XRN1-206ENST00000467077 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
XRN1-206ENST00000467077 ZNF385CQ66K41 422 aaPredicted RBP11.21□□□□□ -0.61
XRN1-206ENST00000467077 RIC3Q7Z5B4 369 aa11.21□□□□□ -0.61
XRN1-206ENST00000467077 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.61
XRN1-206ENST00000467077 NANOS1Q8WY41 292 aaKnown RBP11.21□□□□□ -0.61
XRN1-206ENST00000467077 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
XRN1-206ENST00000467077 FIGNL2A6NMB9 653 aa11.2□□□□□ -0.62
XRN1-206ENST00000467077 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
XRN1-206ENST00000467077 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
XRN1-206ENST00000467077 NUTM2DQ5VT03 806 aaPredicted RBP11.2□□□□□ -0.62
XRN1-206ENST00000467077 GPAT2Q6NUI2 795 aa11.2□□□□□ -0.62
XRN1-206ENST00000467077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.2□□□□□ -0.62
XRN1-206ENST00000467077 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
XRN1-206ENST00000467077 NUTM2AQ8IVF1 878 aaPredicted RBP11.2□□□□□ -0.62
XRN1-206ENST00000467077 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
XRN1-206ENST00000467077 CDC14CA4D256 554 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms