RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 SEPT12Q8IYM1 358 aa17.43■□□□□ 0.38
GTF3A-205ENST00000466776 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
GTF3A-205ENST00000466776 CRYBG1Q9Y4K1 1723 aa17.43■□□□□ 0.38
GTF3A-205ENST00000466776 A0A0G2JS52 829 aa17.42■□□□□ 0.38
GTF3A-205ENST00000466776 MYT1Q01538 1121 aa17.42■□□□□ 0.38
GTF3A-205ENST00000466776 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
GTF3A-205ENST00000466776 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-205ENST00000466776 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
GTF3A-205ENST00000466776 ONECUT3O60422 494 aaPredicted RBP17.39■□□□□ 0.37
GTF3A-205ENST00000466776 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.37
GTF3A-205ENST00000466776 BTG4Q9NY30 223 aa17.39■□□□□ 0.37
GTF3A-205ENST00000466776 ATP7BP35670 1465 aa17.38■□□□□ 0.37
GTF3A-205ENST00000466776 TOPAZ1Q8N9V7 1692 aa17.38■□□□□ 0.37
GTF3A-205ENST00000466776 PHRF1Q9P1Y6 1649 aaKnown RBP17.37■□□□□ 0.37
GTF3A-205ENST00000466776 RGPD1P0DJD0 1748 aa17.37■□□□□ 0.37
GTF3A-205ENST00000466776 NUDT16Q96DE0 195 aaKnown RBP17.35■□□□□ 0.37
GTF3A-205ENST00000466776 PRDM11Q9NQV5 511 aa17.35■□□□□ 0.37
GTF3A-205ENST00000466776 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
GTF3A-205ENST00000466776 BAG6P46379 1132 aa17.33■□□□□ 0.36
GTF3A-205ENST00000466776 DEFB132Q7Z7B7 95 aa17.33■□□□□ 0.36
GTF3A-205ENST00000466776 CDK19Q9BWU1 502 aa17.32■□□□□ 0.36
GTF3A-205ENST00000466776 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
GTF3A-205ENST00000466776 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
GTF3A-205ENST00000466776 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
GTF3A-205ENST00000466776 CCDC61Q9Y6R9 512 aa17.31■□□□□ 0.36
GTF3A-205ENST00000466776 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
GTF3A-205ENST00000466776 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
GTF3A-205ENST00000466776 KIAA0232Q92628 1395 aa17.29■□□□□ 0.36
GTF3A-205ENST00000466776 SRCAPQ6ZRS2 3230 aa17.29■□□□□ 0.36
GTF3A-205ENST00000466776 ACEP12821 1306 aa17.28■□□□□ 0.36
GTF3A-205ENST00000466776 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
GTF3A-205ENST00000466776 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.36
GTF3A-205ENST00000466776 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
GTF3A-205ENST00000466776 LRP5O75197 1615 aa17.27■□□□□ 0.36
GTF3A-205ENST00000466776 SRPK2P78362 688 aaKnown RBP17.26■□□□□ 0.35
GTF3A-205ENST00000466776 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
GTF3A-205ENST00000466776 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
GTF3A-205ENST00000466776 SPATA31A1Q5TZJ5 1347 aa17.25■□□□□ 0.35
GTF3A-205ENST00000466776 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
GTF3A-205ENST00000466776 PLEKHG3A1L390 1219 aa17.25■□□□□ 0.35
GTF3A-205ENST00000466776 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
GTF3A-205ENST00000466776 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
GTF3A-205ENST00000466776 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
GTF3A-205ENST00000466776 PPIP5K1Q6PFW1 1433 aa17.24■□□□□ 0.35
GTF3A-205ENST00000466776 EVA1CP58658 441 aa17.24■□□□□ 0.35
GTF3A-205ENST00000466776 NUTM2GQ5VZR2 741 aa17.24■□□□□ 0.35
GTF3A-205ENST00000466776 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
GTF3A-205ENST00000466776 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
GTF3A-205ENST00000466776 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
GTF3A-205ENST00000466776 LMO7Q8WWI1 1683 aa17.22■□□□□ 0.35
GTF3A-205ENST00000466776 DISP2A7MBM2 1401 aa17.21■□□□□ 0.35
GTF3A-205ENST00000466776 SSH2Q76I76 1423 aa17.21■□□□□ 0.35
GTF3A-205ENST00000466776 CPDO75976 1380 aa17.21■□□□□ 0.35
GTF3A-205ENST00000466776 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
GTF3A-205ENST00000466776 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
GTF3A-205ENST00000466776 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
GTF3A-205ENST00000466776 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
GTF3A-205ENST00000466776 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
GTF3A-205ENST00000466776 USP19O94966 1318 aa17.2■□□□□ 0.34
GTF3A-205ENST00000466776 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
GTF3A-205ENST00000466776 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
GTF3A-205ENST00000466776 BARGINQ6ZT62 677 aa17.19■□□□□ 0.34
GTF3A-205ENST00000466776 CAMTA1Q9Y6Y1 1673 aa17.19■□□□□ 0.34
GTF3A-205ENST00000466776 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
GTF3A-205ENST00000466776 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
GTF3A-205ENST00000466776 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
GTF3A-205ENST00000466776 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
GTF3A-205ENST00000466776 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
GTF3A-205ENST00000466776 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
GTF3A-205ENST00000466776 USP6P35125 1406 aa17.16■□□□□ 0.34
GTF3A-205ENST00000466776 GCP02774 474 aa17.16■□□□□ 0.34
GTF3A-205ENST00000466776 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
GTF3A-205ENST00000466776 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
GTF3A-205ENST00000466776 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
GTF3A-205ENST00000466776 TRIM37O94972 964 aa17.15■□□□□ 0.34
GTF3A-205ENST00000466776 RREB1Q92766 1687 aa17.14■□□□□ 0.33
GTF3A-205ENST00000466776 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
GTF3A-205ENST00000466776 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
GTF3A-205ENST00000466776 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
GTF3A-205ENST00000466776 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
GTF3A-205ENST00000466776 SLIT3O75094 1523 aa17.13■□□□□ 0.33
GTF3A-205ENST00000466776 WNK3Q9BYP7 1800 aa17.13■□□□□ 0.33
GTF3A-205ENST00000466776 APBA3O96018 575 aa17.13■□□□□ 0.33
GTF3A-205ENST00000466776 NLRP6P59044 892 aa17.13■□□□□ 0.33
GTF3A-205ENST00000466776 CABP1Q9NZU7 370 aa17.13■□□□□ 0.33
GTF3A-205ENST00000466776 ROCK2O75116 1388 aaKnown RBP17.13■□□□□ 0.33
GTF3A-205ENST00000466776 CRB1P82279 1406 aa17.13■□□□□ 0.33
GTF3A-205ENST00000466776 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
GTF3A-205ENST00000466776 NUP188Q5SRE5 1749 aa17.11■□□□□ 0.33
GTF3A-205ENST00000466776 ZBTB7CA1YPR0 619 aa17.11■□□□□ 0.33
GTF3A-205ENST00000466776 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
GTF3A-205ENST00000466776 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
GTF3A-205ENST00000466776 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
GTF3A-205ENST00000466776 AATKQ6ZMQ8 1374 aa17.1■□□□□ 0.33
GTF3A-205ENST00000466776 RGPD5Q99666 1765 aa17.1■□□□□ 0.33
GTF3A-205ENST00000466776 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
GTF3A-205ENST00000466776 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
GTF3A-205ENST00000466776 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
GTF3A-205ENST00000466776 COL18A1P39060 1754 aa17.09■□□□□ 0.33
GTF3A-205ENST00000466776 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms