RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.35	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	USP6	P35125	1406 aa		13.35	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	CD163L1	Q9NR16	1453 aa		13.35	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	MON2	Q7Z3U7	1717 aa		13.34	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	NRK	Q7Z2Y5	1582 aa		13.34	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	NINL	Q9Y2I6	1382 aa		13.33	□□□□□ -0.27
SDCCAG3-208	ENST00000466579	ZNF692	Q9BU19	519 aa	Predicted RBP	13.33	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	MEX3C	Q5U5Q3	659 aa	Known RBP	13.32	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.32	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	TMF1	P82094	1093 aa		13.31	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.31	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	ADAMTS2	O95450	1211 aa		13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	ZNF772	Q68DY9	489 aa	Predicted RBP	13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	POTEA	Q6S8J7	498 aa		13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	ILDR2	Q71H61	639 aa		13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	USP19	O94966	1318 aa		13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	AFF2	P51816	1311 aa		13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	PIK3C2A	O00443	1686 aa		13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	USP54	Q70EL1	1684 aa		13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.3	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	SLIT2	O94813	1529 aa		13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	PAK3	O75914	559 aa	Predicted RBP	13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	CDCA8	Q53HL2	280 aa		13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	CABLES1	Q8TDN4	633 aa		13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	C8orf37	Q96NL8	207 aa		13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	SLC12A5	Q9H2X9	1139 aa		13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	NWD2	Q9ULI1	1742 aa		13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	BCL9L	Q86UU0	1499 aa		13.29	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	LMOD2	Q6P5Q4	547 aa		13.28	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	TTC21B	Q7Z4L5	1316 aa		13.28	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	TTC21A	Q8NDW8	1320 aa		13.28	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	KTN1	Q86UP2	1357 aa	Known RBP	13.28	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	SLIT3	O75094	1523 aa		13.28	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	MYOM1	P52179	1685 aa		13.28	□□□□□ -0.28
SDCCAG3-208	ENST00000466579	HSPA5	P11021	654 aa	Known RBP	13.27	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	ABTB2	Q8N961	1025 aa		13.27	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	NGLY1	Q96IV0	654 aa		13.27	□□□□□ -0.29
SDCCAG3-208	ENST00000466579		A0A1W2PP64	1363 aa		13.27	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	EDC4	Q6P2E9	1401 aa	Known RBP	13.27	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	PLCH1	Q4KWH8	1693 aa		13.27	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	COL14A1	Q05707	1796 aa	Known RBP	13.27	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	ATRN	O75882	1429 aa		13.26	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	USP31	Q70CQ4	1352 aa		13.26	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	ANKRD36B	Q8N2N9	1353 aa		13.26	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	TERF2IP	Q9NYB0	399 aa		13.26	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	CPD	O75976	1380 aa		13.25	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.25	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	NLRP13	Q86W25	1043 aa		13.25	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	TMC1	Q8TDI8	760 aa		13.25	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	NRAP	Q86VF7	1730 aa		13.25	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.24	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	FAM83G	A6ND36	823 aa		13.24	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	USP21	Q9UK80	565 aa		13.24	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	HAP1	P54257	671 aa	Predicted RBP	13.23	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	NUTM2G	Q5VZR2	741 aa		13.23	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	UNC5CL	Q8IV45	518 aa		13.23	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	LMO7	Q8WWI1	1683 aa		13.22	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	GC	P02774	474 aa		13.22	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	NLRP6	P59044	892 aa		13.22	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	QTRT2	Q9H974	415 aa	Known RBP	13.22	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	TRPC5	Q9UL62	973 aa	Predicted RBP	13.22	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	KIAA0232	Q92628	1395 aa		13.21	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	NFAT5	O94916	1531 aa		13.21	□□□□□ -0.29
SDCCAG3-208	ENST00000466579	OVOS2	A0A0J9YW53	1432 aa		13.21	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	OVOS2	Q6IE36	1432 aa		13.21	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	COL18A1	P39060	1754 aa		13.2	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	RXRB	P28702	533 aa		13.2	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	RBM6	P78332	1123 aa	Known RBP	13.2	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	C11orf95	C9JLR9	678 aa	Predicted RBP	13.19	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	VPS72	Q15906	364 aa		13.19	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	PRDM11	Q9NQV5	511 aa		13.19	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	GLI3	P10071	1580 aa		13.19	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	ABCC6	O95255	1503 aa		13.18	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	PLEKHG5	O94827	1062 aa		13.18	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	NME9	Q86XW9	330 aa		13.18	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	KCNH5	Q8NCM2	988 aa		13.18	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	AATK	Q6ZMQ8	1374 aa		13.18	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	CAMTA1	Q9Y6Y1	1673 aa		13.18	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	ZC3H6	P61129	1189 aa	Known RBP	13.17	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	ARHGEF25	Q86VW2	580 aa		13.17	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	GJD4	Q96KN9	370 aa	Predicted RBP	13.17	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	CARD14	Q9BXL6	1004 aa		13.17	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	BTG4	Q9NY30	223 aa		13.17	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	ZRANB1	Q9UGI0	708 aa		13.17	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	KIF20B	Q96Q89	1820 aa		13.16	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	RGS12	O14924	1447 aa		13.16	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	SOCS7	O14512	581 aa		13.16	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	ONECUT3	O60422	494 aa	Predicted RBP	13.15	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	CHRNA2	Q15822	529 aa		13.15	□□□□□ -0.3
SDCCAG3-208	ENST00000466579	KIF7	Q2M1P5	1343 aa		13.14	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	FYB1	O15117	783 aa		13.14	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	COL5A2	P05997	1499 aa	Predicted RBP	13.14	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	SPATA31A5	Q5VU36	1347 aa		13.13	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	SPATA31A7	Q8IWB4	1347 aa		13.13	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	NSD3	Q9BZ95	1437 aa		13.13	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	LTN1	O94822	1766 aa		13.13	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	RGPD5	Q99666	1765 aa		13.12	□□□□□ -0.31
SDCCAG3-208	ENST00000466579	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms