RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 KDM5BQ9UGL1 1544 aa11.64□□□□□ -0.55
SCAF11-205ENST00000465950 NYXQ9GZU5 481 aa11.64□□□□□ -0.55
SCAF11-205ENST00000465950 PPP1R42Q7Z4L9 355 aa11.64□□□□□ -0.55
SCAF11-205ENST00000465950 RIMS2Q9UQ26 1411 aa11.64□□□□□ -0.55
SCAF11-205ENST00000465950 SUPT20HQ8NEM7 779 aa11.64□□□□□ -0.55
SCAF11-205ENST00000465950 IFNL2Q8IZJ0 200 aa11.63□□□□□ -0.55
SCAF11-205ENST00000465950 RASSF8Q8NHQ8 419 aa11.63□□□□□ -0.55
SCAF11-205ENST00000465950 SLAIN2Q9P270 581 aa11.63□□□□□ -0.55
SCAF11-205ENST00000465950 WASLO00401 505 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-205ENST00000465950 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
SCAF11-205ENST00000465950 EYA3Q99504 573 aa11.63□□□□□ -0.55
SCAF11-205ENST00000465950 IDI1Q13907 227 aa11.63□□□□□ -0.55
SCAF11-205ENST00000465950 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
SCAF11-205ENST00000465950 CCDC47Q96A33 483 aaKnown RBP11.62□□□□□ -0.55
SCAF11-205ENST00000465950 CNNM1Q9NRU3 951 aa11.62□□□□□ -0.55
SCAF11-205ENST00000465950 IKQ13123 557 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-205ENST00000465950 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
SCAF11-205ENST00000465950 ZSCAN25Q6NSZ9 544 aa11.62□□□□□ -0.55
SCAF11-205ENST00000465950 KDM6BO15054 1643 aa11.62□□□□□ -0.55
SCAF11-205ENST00000465950 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
SCAF11-205ENST00000465950 UGGT2Q9NYU1 1516 aa11.61□□□□□ -0.55
SCAF11-205ENST00000465950 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
SCAF11-205ENST00000465950 TMEM87AQ8NBN3 555 aa11.61□□□□□ -0.55
SCAF11-205ENST00000465950 IFIT2P09913 472 aaKnown RBP11.61□□□□□ -0.55
SCAF11-205ENST00000465950 RTCBQ9Y3I0 505 aaKnown RBP11.61□□□□□ -0.55
SCAF11-205ENST00000465950 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-205ENST00000465950 ERC1Q8IUD2 1116 aa11.61□□□□□ -0.55
SCAF11-205ENST00000465950 PANK3Q9H999 370 aa11.61□□□□□ -0.55
SCAF11-205ENST00000465950 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
SCAF11-205ENST00000465950 B4DLN1 442 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 MRPL12P52815 198 aaKnown RBP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 TRPM2O94759 1503 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 XPCQ01831 940 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.551e-7■□□□□ 10.6
SCAF11-205ENST00000465950 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 DUOX2Q9NRD8 1548 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 ERC2O15083 957 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 CCDC27Q2M243 656 aa11.6□□□□□ -0.55
SCAF11-205ENST00000465950 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
SCAF11-205ENST00000465950 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
SCAF11-205ENST00000465950 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
SCAF11-205ENST00000465950 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
SCAF11-205ENST00000465950 APBA3O96018 575 aa11.59□□□□□ -0.55
SCAF11-205ENST00000465950 EIF6P56537 245 aaKnown RBP11.59□□□□□ -0.55
SCAF11-205ENST00000465950 SART3Q15020 963 aaKnown RBP11.59□□□□□ -0.55
SCAF11-205ENST00000465950 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
SCAF11-205ENST00000465950 IL2RBP14784 551 aa11.59□□□□□ -0.55
SCAF11-205ENST00000465950 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
SCAF11-205ENST00000465950 CEP170Q5SW79 1584 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 NCOA1Q15788 1441 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 LDHCP07864 332 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 CCDC158Q5M9N0 1113 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 ZCRB1Q8TBF4 217 aaKnown RBP11.58□□□□□ -0.56
SCAF11-205ENST00000465950 CDC5LQ99459 802 aaKnown RBP11.58□□□□□ -0.56
SCAF11-205ENST00000465950 USP47Q96K76 1375 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 CAVIN4Q5BKX8 364 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 MPHOSPH10O00566 681 aaKnown RBP11.58□□□□□ -0.56
SCAF11-205ENST00000465950 GNAI3P08754 354 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 TRAF1Q13077 416 aa11.58□□□□□ -0.56
SCAF11-205ENST00000465950 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 WASHC4Q2M389 1173 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 CCDC57Q2TAC2 916 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 ZSCAN29Q8IWY8 852 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-205ENST00000465950 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 CEP89Q96ST8 783 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
SCAF11-205ENST00000465950 APPP05067 770 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 RIPK4P57078 832 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 FMNL2Q96PY5 1086 aa11.57□□□□□ -0.56
SCAF11-205ENST00000465950 KIF22Q14807 665 aa11.56□□□□□ -0.56
SCAF11-205ENST00000465950 ATP10BO94823 1461 aa11.56□□□□□ -0.56
SCAF11-205ENST00000465950 CCDC125Q86Z20 511 aa11.56□□□□□ -0.56
SCAF11-205ENST00000465950 E9PSI1 815 aa11.56□□□□□ -0.56
SCAF11-205ENST00000465950 TNNI2P48788 182 aa11.56□□□□□ -0.56
SCAF11-205ENST00000465950 GGNBP2Q9H3C7 697 aa11.56□□□□□ -0.56
SCAF11-205ENST00000465950 BRD4O60885 1362 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-205ENST00000465950 XBP1P17861 261 aa11.56□□□□□ -0.56
SCAF11-205ENST00000465950 RBM6P78332 1123 aaKnown RBP11.56□□□□□ -0.56
SCAF11-205ENST00000465950 FAM177BA6PVY3 158 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 TRIM29Q14134 588 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 OTUD7BQ6GQQ9 843 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 SETDB2Q96T68 719 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 NSD3Q9BZ95 1437 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 BICDL1Q6ZP65 573 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 TCP11L2Q8N4U5 519 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 KIF16BQ96L93 1317 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 NPHP4O75161 1426 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-205ENST00000465950 TCIRG1Q13488 830 aa11.55□□□□□ -0.56
SCAF11-205ENST00000465950 AIMP1Q12904 312 aaKnown RBP11.54□□□□□ -0.56
SCAF11-205ENST00000465950 MPRIPQ6WCQ1 1025 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms